Chroicocephalus ridibundus (black-headed gull): 134509016
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Entry
134509016 CDS
T10910
Symbol
NTRK2
Name
(RefSeq) BDNF/NT-3 growth factors receptor isoform X1
KO
K04360
neurotrophic tyrosine kinase receptor type 2 [EC:
2.7.10.1
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04010
MAPK signaling pathway
crid04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
134509016 (NTRK2)
04020 Calcium signaling pathway
134509016 (NTRK2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
crid01001
]
134509016 (NTRK2)
Enzymes [BR:
crid01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
134509016 (NTRK2)
Protein kinases [BR:
crid01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
134509016 (NTRK2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
LRRCT_2
ig
Ig_2
LRR_8
Ig_C17orf99
Haspin_kinase
LRRNT
TMEM154
Motif
Other DBs
NCBI-GeneID:
134509016
NCBI-ProteinID:
XP_063177459
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Position
Z:complement(42835349..43046756)
Genome browser
AA seq
842 aa
AA seq
DB search
MVSWRRRPGPGLAGLWGLCWLVLGCWRGALGCPASCRCSSWRIWCAEPAPGISSFPVPQR
SAEGDNVTEIYIANQRKLESINDNEVGFYVGLKNLTVVDSGLRFVSRQAFVKNVNLQYIN
LSRNKLSSLSKKPFRHLGLSDLILVDNPFKCSCEIMWIKKFQETKFYTETQDLYCIDDNN
KRTALLDMKVPNCDLPSANLSNYNITVVEGKSITLYCDTTGGPPPNVSWVLTNLVSNHES
DTSKNPASLTIKNVSSMDSGLWISCVAENIVGEDQASAELTVFFAPNITFIESPTPDHHW
CIPFTVKGNPKPTLQWFYEGAILNESEYICTKIHVINQSEYHGCLQLDNPTHLNNGAYTL
LAKNEYGEDEKRVDAHFMSVPGDGSGPIVDPDVYEYETTPNDLGDTTNNSNQITSTDVSN
KENEDSITVYVVVGIAALVCTGLVIMLIILKFGRHSKFGMKVHGEVKGVGLVDQIWLSLQ
DCDNEGPSSVISNDDDSASPLHHISNGSNTPSSSEGGPDAVIIGMTKIPVIENPQYFGIT
NSQLKPDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDN
ARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMA
EGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRD
VYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN
EVIECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKASPVYLDI
LG
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcctggcggcggaggccggggcccggcctggccgggctgtggggcttgtgctgg
ctggtgctgggctgctggcggggcgcgctgggctgccccgcgtcctgccgctgcagctcc
tggcggatctggtgcgcggagccggcgccgggcatctcctccttccccgtgccgcaacgg
agcgccgagggcgacaatgtcaccgagatttacatcgcaaaccagcgaaaattagagagt
atcaatgacaatgaagttggattttatgttggacttaaaaatttgacggtggtggattca
ggcttaagatttgtgtcccgtcaggcatttgtgaaaaacgtcaacctacaatacatcaat
ttatccagaaacaagctctcaagtttgtccaagaagccttttcgccatctgggtttgtct
gatctgatattggtggacaatccattcaagtgttcctgtgaaattatgtggatcaagaaa
tttcaagagaccaagttttacacagaaactcaggatttatattgcatagatgacaacaac
aagaggacagccttgctggatatgaaggttccgaactgcgacttaccctcagcaaactta
agcaattacaatatcaccgtggtggagggaaagagcatcacattgtactgtgatactact
ggcgggccaccccctaatgtgtcctgggtgctcactaatcttgtttcaaaccatgagagt
gacacaagtaagaaccctgcctcgctaaccataaagaacgtttcatccatggacagtgga
ctgtggatttcctgcgtagcggagaacattgtgggagaggaccaagcctctgctgagctc
acggtattctttgcaccaaatatcacgtttattgaatctccaaccccggaccaccactgg
tgtattccattcactgtgaaagggaaccctaagcccacattgcagtggttctatgaaggg
gctatactgaatgagtctgaatacatctgtactaaaatacatgttatcaatcaaagtgaa
taccacggctgccttcagctggacaatcctacccacctgaataatggtgcttatacctta
ctggcaaagaatgagtatggagaggatgaaaaacgggttgatgctcatttcatgtcagtg
cctggagatggtagtggcccaattgtggatccagacgtttatgagtatgaaaccacgcct
aatgatcttggagacactacaaataacagtaatcaaatcacttctacggatgtttccaac
aaagagaatgaagatagcatcactgtgtatgttgtggtaggaattgcagcactggtgtgc
actggcttagtaataatgctcattattctgaaatttggaagacactcaaagtttgggatg
aaagttcatggtgaagtaaaaggagttggtctggtagatcaaatatggctttcattgcaa
gactgcgacaatgaaggtccttcttcagttatcagcaatgatgacgattcagccagtccc
ctccaccacatctcaaatggcagtaacactccgtcttcttctgaggggggtcctgatgca
gtcattattgggatgacgaagattcccgtcatcgaaaatccccagtattttggaattact
aacagtcaactcaagccagacacctttgtgcagcatatcaagcgccacaatatcgttctc
aaaagagaactgggagaaggagcctttgggaaagtctttctggcagaatgctataacctc
tgtccggagcaggacaagatcttggtggcagtgaagacactgaaggatgccagcgacaat
gcccgcaaggacttccaccgtgaggcagagctgctaactaacctgcaacacgagcacatc
gtaaagttctacggcgtctgtgtcgagggtgatccgctcatcatggtctttgagtatatg
aagcatggagatcttaacaaattcctcagggcacatggaccagatgcagtactgatggca
gaaggcaaccgtcctgctgagctgacccaatcccagatgcttcatattgcccagcagatt
gcagctggtatggtctacctggcgtcgcagcacttcgtgcatcgggatcttgctacccgg
aattgcctggttggtgagaacctactggtgaagattggggattttgggatgtctagagat
gtgtacagcacagactactatagggttgggggtcacaccatgctgcccattcgttggatg
cctccagagagtatcatgtacaggaagttcaccacagaaagtgatgtctggagccttggg
gttgtattatgggaaatctttacctatggcaaacagccatggtatcagctctcaaacaac
gaggtgattgagtgcatcactcagggccgagtcctgcagcgacctcgcacatgccccaag
gaagtgtatgacttgatgttgggctgttggcaacgggagcctcacatgaggctcaacatc
aaagaaatccattccctcctccagaacttggccaaggcatctccagtctacttggatatt
ttaggctaa
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