Chroicocephalus ridibundus (black-headed gull): 134509088
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Entry
134509088 CDS
T10910
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04512
ECM-receptor interaction
Brite
Lectins [BR:
crid04091
]
C-Type lectins
Lecticans
134509088 (FREM1)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134509088
NCBI-ProteinID:
XP_063177639
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Position
Z:51743479..51821208
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AA seq
2186 aa
AA seq
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MKPFEKSWLFLLLPLLLRVVCSSFISVNLGLKVMKGQSVFLSEDDLKFSIPREKDVCKVE
VVINEPITQRVGKLTPEVFDCCFLPNEVKYTHNGCPILDEDVVMLRLYRFTETETFVETF
TLRVQLLEPDCNIIKMRSRALEVPEHYGLSRAIDKNVLAFDYDRKINLDCTISIASSETH
LPAYGQLITGEVQREQLRGDQPQSFFPGPKHSLGQQCRNGSCVLRLGVIPNTKMSCEEFL
RMGIRYQHLDPPSPDTDYIPLRLDLTDSRSKTLHKTEYAWLPVQIKGAIPNQIPKAAPVA
KFTLEVDQFILTPITTTTVDAEDDETPKSLLVFNITKPPPRGFITHLSDHTKPVGSFTWK
DLSDMLIAYQPPNNSYPERRNYEVEFEVHDFYFERSLPITVHLSIRTTDTNAPRVSWNTG
LNLLEGQSRPITWQHFQIVDNDDIQNVRLVTIDGLQHGRLTVRGGKGFMFAVSDIQAGVV
RYHHDDSDSTKDFVVFRIFDGHHSIRHKFPINILPKDDSPPFLISNVVIEVHEGQTILIE
GSMLHASDMDSSDDYILFNITKPPQAGEIMKKPGPNLIGYTVSSFLQRDLFNGIIYYHHL
GGEVFEDSLEFVLCDSHDPPNLSEPQVMMVHIIPVDDQLPREAPGVTRHLVVKETEIAHL
TKKHLHFIDVEEEDRELTYTITTSPFFSCMHGHSDAGKLFMVDTIPKLVKDPAALALQSF
TQHAVNYMKVAYMPPLQDIGSEPQQVQFIFSVSNQHGGTLYGICFNITILPVDNQAPEVF
TSHLRVEEGGLSPVTEGHILISDVDTKREHLLLLLQRQPQHGAVELDGIPMNEGERLSCG
DLRTLAVRYRHDGSETLTDDVLFAATDGIHFVEFILQVKVLPVNDEPPVMRTGLVPVLHC
LEGEEVVLSSEYIYATDADSDDMKLMFMLARQPYHGIVKKAGIPVDRFSQADVISGLVTY
KHTGGEIGLTPSIEILTFVVSDGEAGLDVKDCCYDGPLPPPVPLHDPFPVYDLNITVFPV
DNQPPSIATGARFVVEEGSSAALTTNHLLATDPDTTADDLEFVLVSPPQFGYIENILPSP
GFEKSNIGISVASFHLKHLKALNINYVQARHVRMEPTADCFVLYVTDGLHRSAETPFFVL
INPINDEVPEFIARNITVQEGQMKELDLSVINAVDLDVPQDRLVFGVVQRPSHGFLINGI
HGNDILHYKQLINHNHHSHGLLVHDFSMELLKNGMKLMYMHDNSENLTDSFKIQLSDGKH
KVLRTISVKVIPVNDEKPVLSKKDDLEVNMGEARIISSAVLSAKDKDTPRERIYYLFERL
PENGQLQLKVGQGWTTIQTGMKCTQEELDMNLVRYVHTGAIGSKNQDSFTFYLWDGYNRS
PAVDFYINIKDMEKGDIAVFRKPLRVTKGDRGYITTNVLLALDGTDKPEELLYVITSPPQ
YGQIEYVSYPGIPITSFSQMDVARQIVCYVHNTKAVVPEDAFRFVISNGLRTKHGTFMIS
LEAVDQALPTLSRNAGLRLVEGAMALLSPDVLQLSDPDTAKENLTFLLAQLPQYGHLYYR
GAVLLQYNFTQQDVDNRDVAYKHRGGDSQIDRFTFVATDRTNQGFIVNGRVQSEPVAFTI
QVDHLDKVAPKIIHLRCFSDVELLKNGNYGIYITARSLKASDPNTEDDKIFFKILRGPHY
GYLENITTGGFIQEGFTQKDLNNKIILYVINPSQEVNSDNLEFQVTDASGNSAVPQRLEL
RWSRIEMQQTEYEVCESVGVVSLKITRAGHSAESAFIAVKVNEISAMLGKDFTVTPSKLV
QFDPGMSTKTWNIAITYDGLEEDDEVFEVVLNSPVNAVLGTRTKAVVKILDSKGGQCSYS
HSSGQSKQDFSGRGTLFPVSSGSPSPPRPGNAPLEGIPPPPSKGMREHGEDPRQEHSLAN
QSRTRLKVTGNGRIVHPSSVFRNGTDVVFKYHGMVSLKIEDDTSSAKANKKAQVSVISQA
EPQINVVSSRKTEIPQADKAELASEASSRHQDFYSFPKACTPDLKGLLHYEESIQKLFQC
DGIIWKFWNSQSEEASTKKCPSGWSHHEGSCYFLVVNHKVTWNTAARACREQYLGSLASV
ANEQHMQWLWDFSGRKPFWIGLNDLVNPGHWEWNGGEPVTYINWRRGSYHFPKRGRNCVL
VQKRGKWQATDCRKVKRNSYICSRKL
NT seq
6561 nt
NT seq
+upstream
nt +downstream
nt
atgaagccctttgagaaaagctggttgtttctactgctgcctcttctgctaagagttgtc
tgctcctcctttattagtgtcaaccttgggctgaaggtgatgaagggacagtctgtcttc
ctgtcagaagatgacctcaagttttccatccccagggagaaggatgtctgcaaagtagaa
gttgtgattaatgagccaataactcagcgggttgggaaactaactccagaggtttttgac
tgttgcttccttccgaatgaagtcaaatatacccacaacggctgtcccattttagatgaa
gacgtggtcatgcttaggctgtacaggtttacagaaactgaaacgtttgtagaaacgttc
accctccgtgtgcagttacttgagccagactgtaacatcatcaaaatgcgctcccgtgcc
ctggaggtccctgagcactatgggctgtccagggcgattgacaagaatgtcctcgctttt
gactatgacaggaagataaatctggattgcaccatttccattgcctcttcggaaacccac
ctgcctgcttatggccagcttatcaccggggaagtgcagcgagagcagcttcgtggagat
cagccacagagcttcttccctggccctaagcacagcctgggccagcagtgcagaaacggg
agctgtgtgctgaggctgggagtcattcccaacacaaaaatgagctgtgaagaatttctg
aggatggggattcggtatcagcaccttgaccctccctcgcctgacaccgactacattcct
ctgaggttggatctcacagacagcagaagcaaaactctgcacaagactgagtacgcgtgg
ctccctgttcagattaaaggcgctattcccaaccaaatacccaaagctgccccggtggct
aaattcaccctggaagtagatcagttcattttaacccccattacaaccacaactgttgat
gctgaagacgatgaaactccgaagtccctgcttgtattcaacattaccaagccacctcca
cgaggcttcatcactcatctgtctgaccacacaaaacctgttggctccttcacgtggaag
gatctcagtgatatgctcattgcttatcagcctccaaataacagctacccagagaggagg
aattatgaggtggagtttgaggttcatgacttctactttgaaaggagtttaccgattact
gtgcatctttctatcagaacaacagatacaaatgctcctcgagtttcatggaacacgggc
ctcaacctcctggaagggcaatcccgaccaatcacatggcaacacttccaaattgtagac
aacgatgacatccaaaatgttcgcttggtcacaatagacggcttacagcatgggcggctc
acagtaagaggagggaagggattcatgttcgcagtctctgacattcaggctggagttgtt
cgctaccatcatgatgacagtgattctactaaggactttgtggtatttaggatttttgat
ggccaccacagtattcgccataagtttccaatcaatatcctccctaaagatgacagccct
ccatttcttatcagcaatgtggtcattgaagttcatgagggacagacgatcctgattgag
ggctccatgcttcatgcttctgacatggattccagtgatgactacatactattcaatatt
accaagccaccacaggctggagaaatcatgaagaaaccaggaccaaacctgataggatat
actgtcagcagttttcttcagagggatctatttaatggaataatttattaccatcatttg
ggaggagaagtatttgaagattcccttgagtttgtgctgtgcgatagccatgaccccccc
aatctctcagagccacaggtgatgatggtgcacattatccctgtggatgatcagctaccc
agggaagccccaggagtgacccgtcatctggttgttaaggagactgagattgctcaccta
actaagaaacatctccacttcatcgatgtggaagaggaagacagggaactcacgtacacc
ataaccacttccccatttttctcttgcatgcacggccattcagatgctgggaagttattt
atggtggacaccatccccaagctggtcaaggatcccgctgctcttgcactgcagtcattt
actcagcatgctgtgaactacatgaaagttgcctacatgccgccactgcaggacatcggg
tctgaacctcagcaagtccagtttattttttccgtcagcaatcagcatggtggcactttg
tatgggatctgcttcaatattacaattcttcctgtggacaatcaagccccagaggttttt
acaagccatttgagagtggaagagggtggcctgagccctgtcacagagggacacattctc
atctctgatgtggacacgaaacgggagcatctcctcctcctcctgcagagacagcctcag
cacggggcggtggagctggatggcattcccatgaatgaaggcgagaggctttcctgtggg
gacctgcgtaccctggccgtcagatatcggcatgatggatctgagactctcactgatgat
gtcctcttcgcagccacagatggcatccactttgtagagttcatcctgcaggtcaaggta
ttgcctgtgaatgatgagccacctgttatgcgaacaggccttgttcctgtgctccactgc
ctggagggtgaagaagtggtcctctcctcagagtacatttatgccacggatgcagacagt
gatgacatgaaactgatgtttatgctggctcgccagccctaccacggcatcgtgaagaaa
gctggcattcctgtggatcgtttctcccaagccgatgtcatctctggcttagttacgtat
aagcacactggtggggagattggcctgacaccttccattgagatcttaaccttcgttgtt
tctgacggtgaggctggccttgatgtgaaggactgctgttatgatggacctcttcctcct
ccagttccgcttcatgatccatttccagtatacgatcttaacatcactgtatttccagtg
gacaaccagcctccatcaattgcaactggtgcaaggtttgtggtggaggagggctcctca
gcagcccttactaccaaccatttgcttgccactgaccctgacaccactgcagatgactta
gagtttgtcttggtttctcctccccagtttggttacattgagaatatactgccttctcct
gggtttgagaagagcaacattggtataagcgtagcttcatttcacctgaagcacctgaaa
gctctgaacataaactacgtacaagccaggcacgtgcgaatggagccaacagcagactgc
ttcgtactttatgtcaccgatgggctgcatcgctcagcagagactccatttttcgtgctg
atcaacccaatcaatgatgaagtcccagaattcatagcaaggaatattactgttcaagaa
gggcagatgaaagagctggatctctctgttatcaatgcagttgatctggatgtgcctcaa
gaccgtttggtatttggggttgtgcagaggccctcgcacggattccttattaatggaatt
catggcaatgatattctacactataaacagttaattaaccacaaccaccacagccatggg
ttgcttgttcatgacttttccatggagctactgaagaacggaatgaagctgatgtacatg
cacgacaattcggaaaacctcactgacagctttaaaatccagctatcagatgggaaacac
aaagtcctcagaaccatttcagtaaaggtcattccagttaatgacgagaaaccagtgctg
agcaagaaggatgatttagaggtgaacatgggtgaagctcgaataatttctagtgctgtt
ctgtcagcgaaagataaagatacccccagggagagaatttactacttatttgaaagactt
ccagaaaatggtcagcttcagctcaaggtaggccaaggctggacgactatccaaactgga
atgaagtgcactcaggaagaactggatatgaaccttgtgagatacgtccatacaggagct
ataggatccaagaaccaagacagcttcacattttatctgtgggatgggtacaacagatca
ccagctgtggacttctacataaatatcaaggacatggaaaagggagacattgctgttttc
agaaagcctcttagagtgacaaaaggggatcggggctacattacaaccaatgtcctcctt
gcactggatggtactgacaagccagaggaactcctctatgtgataacctccccaccccag
tacgggcaaatagaatatgtcagctatcctggcatccccattacgagcttcagtcaaatg
gatgtagcaagacagatagtctgctatgttcacaacactaaagcagttgttcctgaagat
gcattcagattcgtcatcagcaatggactgaggactaagcatgggacattcatgatctcc
ttggaggcagtcgaccaagctttgcccacactgtctaggaacgcagggttaagactagtg
gaaggcgctatggcactcctttctcctgatgtcctgcagctttcagacccagacactgcc
aaagaaaaccttaccttcctcttggctcagctcccccagtacggtcatctctattatcga
ggggctgtgctactgcagtacaatttcacccagcaagatgtggacaacagggatgttgcg
tacaagcaccgaggtggggattcccagattgacagatttacatttgttgcaacagatagg
actaatcaaggcttcatcgtgaatggcagggtgcagagcgagccagtggcattcaccatt
caggtggatcatttggacaaagtggcaccaaaaattattcatctccgttgtttttctgat
gtggaactgctgaagaatggcaattatgggatctatattaccgccaggtccctgaaggca
tctgaccccaatacagaagatgacaaaatattttttaagatcttacgaggtcctcattat
ggctacctggaaaatataacaacaggtggatttattcaagaagggtttacccaaaaggat
ttaaacaacaaaatcatactgtatgtcatcaatccatcgcaggaggtgaattcagacaat
ttggagtttcaagtcacagatgccagtggaaactctgcagtgccccaaaggctggagcta
cggtggtctcggattgaaatgcaacagactgaatatgaagtatgtgagagcgtgggagta
gtgtctctgaaaatcaccagggcaggacactccgcggagtccgcctttattgccgtcaag
gtcaatgaaatatctgctatgctgggaaaagactttacagtgactccctccaagcttgtt
cagtttgatccaggaatgtcaaccaagacgtggaacatagcaattacctatgatggatta
gaggaagatgatgaagtctttgaagtagttctgaactcccctgtgaatgccgttcttggc
acccggacaaaagctgtagtgaaaattttggactcaaaaggaggtcagtgcagctattcc
cattcttctggccaaagcaagcaggacttctcggggagaggcacgctgtttccagtttcc
tcgggctccccatcacctcccaggcctggcaatgctcccttggaagggatcccaccgcct
ccttccaaagggatgagagagcatggagaggacccacggcaggaacacagcttggcgaat
cagtcaaggaccaggctgaaagtgactggaaatggcagaatagttcatccttcatctgta
tttagaaatggaactgatgtggttttcaaatatcatgggatggtatcactcaaaatagag
gatgacacctcatcagctaaagcaaacaagaaggctcaagtgtcagtaattagccaagca
gaaccacagataaatgtcgtctcctccaggaagacagaaatcccacaagctgataaggca
gaactggcatctgaagcaagctcaagacatcaggacttttactctttcccaaaggcctgt
acaccagatttaaaggggctcttgcattatgaagaaagcattcaaaagttatttcagtgt
gatgggataatatggaaattctggaactcccaaagcgaggaggcaagcacaaagaaatgt
ccctctggatggagtcatcatgagggcagctgctacttcctggtagtgaatcacaaggtc
acctggaacaccgctgctcgggcttgcagagaacaatacctggggagtctagcaagtgtg
gctaatgaacaacacatgcagtggctgtgggacttcagtgggaggaagcccttttggata
ggcttgaatgacctagtcaatccgggacattgggagtggaatggaggagaacctgtaacc
tacataaactggagaagaggctcctaccacttcccaaagagaggcagaaattgcgtattg
gtgcagaagcgaggaaaatggcaagcaactgactgcaggaaggtcaaacggaacagctat
atatgttcaagaaagctgtaa
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integrated database retrieval system
