Chroicocephalus ridibundus (black-headed gull): 134509114
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Entry
134509114 CDS
T10910
Symbol
ERCC2
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03022
Basal transcription factors
crid03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
134509114 (ERCC2)
09124 Replication and repair
03420 Nucleotide excision repair
134509114 (ERCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crid03021
]
134509114 (ERCC2)
03036 Chromosome and associated proteins [BR:
crid03036
]
134509114 (ERCC2)
03400 DNA repair and recombination proteins [BR:
crid03400
]
134509114 (ERCC2)
Enzymes [BR:
crid01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
134509114 (ERCC2)
Transcription machinery [BR:
crid03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
134509114 (ERCC2)
Chromosome and associated proteins [BR:
crid03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
134509114 (ERCC2)
DNA repair and recombination proteins [BR:
crid03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
134509114 (ERCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
DEAD
ResIII
SesA
Motif
Other DBs
NCBI-GeneID:
134509114
NCBI-ProteinID:
XP_063177665
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MKLNIDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLSLIVAYQ
RAHPLDVTKLIYCSRTVPEIEKVIEELRKLMDFYEKELGEKVPFLGLALSSRKNLCIHPE
VSSLRFGKEVDSRCLSLTASYVRARHQRDRSLPACRFFEEFDTHGREVPIPYGVYNLDDL
KAHGRQKGWCPYFLTRYSILHANVVVYSYHYLLDPKIADLVSKELARKSVVVFDEAHNID
NVCIDSMGVNITRRTLDRCQANVATLQATIQKIKETDARRLAEEYRRLVEGLREAGAARE
TDLYLANPVLPDEVLREAVPGSIRTAEHFVGFLKRLVSYLRARVRGPRVVQESPPAFLRD
LYEKVCIERKPLRFCAERLHSLLRTLEITDVADFSAITLVANFATLVSTYAKGFTIIIEP
FDDRTPTIPNPVLHFSCMDASIAIKPVFERFQSVIITSGTLSPLEIYPKILDFRPVTMAT
FTMTLARTCLCPMIVGRGNDQVAISSKFETREDIAVIRNYGNLLLELSAVVPDGLVAFFT
SYQYMENIVASWYEQGILENIQRNKLIFIETQDGAETSVALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHYGRAVVMFGVPYVYTQSRILKARLQYLREQFQLRENDFLTFDAMRQA
AQCVGRALRGKSDYGIMLFADKRFARADKRGKLPRWIQDHLPDANLNLTVDEALQVAKFF
LRQMAQPFPQGEQLGLSLLTLEQLQSEETQQRVQQLARQL
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaacatcgatgggctcctggtctacttcccctatgactacatctaccccgag
cagttctcctacatgctggagctcaagaggaccctggacgccaagggacacggtgtcctg
gagatgccctcggggaccgggaagacggtgtcactgctgtcgctcatcgtcgcctaccag
cgggcccatccgctggacgtcaccaaactcatctactgctcccgcacggtgccggagatc
gagaaggtgatcgaggagctgcggaagctgatggatttttacgagaaggagctgggggag
aaggtgccgttcctggggctggcgctgagctccaggaagaacctctgcatccaccccgag
gtgtcctcgctgcgcttcgggaaggaggtggacagccgctgcctgagcctgacggcctcc
tacgtgcgggcccggcaccagcgcgaccgatccctgcctgcctgccgcttcttcgaggag
ttcgacacccacgggcgcgaggtccccatcccctacggcgtctacaacctggacgacctg
aaggcccacggccgccagaagggctggtgcccctatttcctcacccgctactcgatcctg
cacgccaacgtggtggtctacagctaccactacctgctggaccccaagatcgccgacctg
gtctccaaggagttggccaggaagtcggtggtggtctttgacgaagcccacaacatcgac
aacgtctgcatcgactccatgggggtgaacatcacccgccgcacgctggaccgctgccag
gccaacgtggccacgctccaggccaccatccagaagatcaaggagacggacgcgcggcgg
ctggcggaggagtaccggcgcctggtggaggggctgcgggaggcgggcgccgcccgggag
accgacctctacctcgccaaccccgtgctgcccgacgaggtgctgcgggaggcggttcct
ggcagcatccgcacggccgagcacttcgtggggttcctgaagcggctggtgtcctacctg
cgggcgcgggtgcgggggccgcgcgtggtgcaggagagcccccccgccttcctgcgcgac
ctctacgagaaggtctgcatcgagcgcaagcccctgcggttctgcgccgagcgcctgcac
tcgctgctgcggacgctggagatcacggacgtggccgatttctccgccatcaccctcgtc
gccaacttcgccaccctcgtcagcacctacgccaagggtttcaccatcatcatcgagccc
ttcgacgacaggacccccaccatccccaaccccgtcctgcacttcagctgcatggacgcc
tccatcgccatcaaacccgtcttcgagcgcttccagtccgtcatcatcacgtcagggacg
ctgtccccgctggaaatttaccctaaaatcctggatttccgccccgtcaccatggccacc
ttcaccatgacgctggcccggacctgcctgtgccccatgatcgtgggtcggggcaatgac
caggtggccatcagctccaagttcgagacgcgcgaggacatcgccgtcatccgcaactac
gggaacctgctgctggagctgtcggccgttgtccccgacggcctcgtcgccttcttcacc
agctaccagtacatggagaacatcgtggcctcctggtacgagcagggcatcctggagaac
atccagcgcaacaagctcatcttcatcgagacgcaggacggcgccgagacctccgtggcc
ctggagaagtaccaggaggcctgcgagaacggccggggggccatcctgctctccgtggcc
cgcggcaaagtgtcggagggcatcgacttcgtgcatcactacggccgggccgtcgtcatg
ttcggggtcccctacgtctacacccagagccgcatcctcaaggcgcggctgcagtacctg
cgggagcagttccagctgcgggagaacgacttcctcaccttcgacgccatgcggcaggcg
gcgcagtgcgtggggcgggcgctgcgcggcaagagcgactacggcatcatgctcttcgcc
gacaagcgcttcgcccgggcggacaagcgggggaagctgccgcgctggatccaggatcac
ctccccgacgccaacctcaacctgacggtggacgaggccctgcaggtggccaagttcttc
ctgcgccagatggcccagcccttcccacagggggagcagctggggctgtcgctgctgacg
ctggagcagctgcagtcggaggagacgcagcagcgcgtgcagcagctcgcccgccagctc
tga
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