Chroicocephalus ridibundus (black-headed gull): 134509471
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Entry
134509471 CDS
T10910
Symbol
GTF2H4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03022
Basal transcription factors
crid03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
134509471 (GTF2H4)
09124 Replication and repair
03420 Nucleotide excision repair
134509471 (GTF2H4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crid03021
]
134509471 (GTF2H4)
03400 DNA repair and recombination proteins [BR:
crid03400
]
134509471 (GTF2H4)
Transcription machinery [BR:
crid03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
134509471 (GTF2H4)
DNA repair and recombination proteins [BR:
crid03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
134509471 (GTF2H4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
134509471
NCBI-ProteinID:
XP_063178082
LinkDB
All DBs
Position
Unknown
AA seq
476 aa
AA seq
DB search
MEAAPPTPQPLAPLPPPPPPHPRLQRGQLQCKNLHEFLRGLSPPVLDRLYGHPATCLAVF
RELPGLAQVGVMRMLFLEQPLPQAAVALWVKKEHSKEQAESREVLLALRLWHPHTLPGGL
PGVGLHPNFRHNLRVALLGGGKAWSDDTSQLGPDKHARDVPALDKYAEERWEVILHFMVG
SPSAAVSQDLAQLLVQAGLMKSEGGEAPCITSAGFQFLLLDTPAQLWYFVLQYLRGAEAR
GMDLVEILSFLFQLSFSTLGKDYSVEGMSESLLTFLQHLREFGLVFQRKRKSRRFYPTRL
AIALASGTSGAPPEPDAHGFVIVETNYRIYAYTDSELQIALIALFSELLYRFPNLVVAQV
TRDSVQAAIANGITADQIIHFLRTRAHPVMAKQTPVLPPTITDQIRLWELERDRLRFSEG
VLYNQFLSQVDFEVLRDHARALGVLVFENPGRRLMVVTPGGHPDVKRFWKRQKHSA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggccccccccaccccgcaaccactagcacccctcccaccgcctccccccccc
cacccccggctgcagcgggggcagctgcagtgcaagaacctgcacgagttcctgcggggg
ctcagcccccccgtcctcgaccgcctctacgggcaccccgccacctgcctggccgtcttc
cgggagctgccggggctggcgcaggtgggggtgatgcggatgctgttcctggagcagccc
ctgccccaggccgccgtcgccctctgggtcaagaaggagcacagcaaggagcaggcggag
agccgggaggtgctgctggcgctgcggctgtggcacccccacaccctgccgggggggctg
ccgggggtgggcctgcaccccaacttccgccacaacctgcgggtggccctgctggggggg
ggcaaggcatggtcggacgacacgagccaactgggacccgacaaacacgcccgggacgtg
ccggcgctggacaaatacgccgaggaacgctgggaggtgattctgcactttatggtgggc
tcccccagcgccgccgtcagtcaggatctggcccagctgctcgttcaagctgggcttatg
aaaagcgaggggggggaggcgccctgcatcacctcggccggtttccagttcctcttactg
gacaccccagcgcagctctggtatttcgtcctccagtacctgcggggggcggaggcgcgg
ggcatggacctggtggagattctctccttcctgttccagctcagcttctccaccctgggc
aaggattactccgtggagggcatgagcgagtccctgctgaccttcctgcagcacctgcgc
gagttcgggctggtcttccagagaaagcgcaagtcccgccgcttctaccccacgcgcctg
gccatcgccctggcctcggggacgtcgggggccccccccgagcctgacgctcacggcttc
gtcatcgtcgagaccaactaccgcatctacgcctacacagactcggagctgcagatcgcc
ctcatcgccctcttctccgagctcctctatcgcttccccaacctggtggtggcccaggtg
acaagggacagcgtgcaggcggccatcgccaacggcatcaccgccgaccagatcatccac
ttcctccgcacccgagcgcaccccgtcatggccaagcagacgccggtgctgccccccacc
atcaccgaccagatccgcctctgggagctggagcgggaccggctgcgcttctccgagggg
gtcctgtacaaccagttcctgtcgcaagtggatttcgaggtgctgcgggaccacgcgcgg
gcgctgggggtgctggtcttcgagaaccccggccggcggctgatggtggtcacccccggg
ggacaccccgacgtcaagcgcttctggaagaggcagaaacacagcgcttga
DBGET
integrated database retrieval system
