Chroicocephalus ridibundus (black-headed gull): 134509499
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Entry
134509499 CDS
T10910
Name
(RefSeq) fibroin heavy chain-like isoform X1
KO
K26457
neuronal PAS domain-containing protein 4
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
Transcription factors [BR:
crid03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
134509499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134509499
NCBI-ProteinID:
XP_063178113
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All DBs
Position
Unknown
AA seq
1135 aa
AA seq
DB search
MGPPGRCCGSCQGYHGSTWARLWVPPVTPWVVLWVLGPPGCPRAVGEPCGRGGGCWLGAD
VCPHAGPTRGAPMELLGGPELADLVASLPGFLLAVTREGKLVGVTDNVAQHLGHSMVDLV
AQGDSIYDLLDPADHPLVRHQLNLPGPPQAERLFRCRFTTSRASRRPSAGRKLVLLRGRF
QAPPGPPGASPGLFVAFCAPLDPPPWPCPDCLLLPAFQSRHARDLALLDVSDSVLIHLGY
GRGELLGRSWYRLLHPEDLGHVARQHLRLAGAGAEVRGELVTRLQRKDGLGWTWVYARLR
PEGPALLAHNFVISEAEAWCLRQQLAAEAPPGPPEPFGPGLDLPGAGIGAGGDLGVGASP
GIGLGVGPGVGSSVDLSVGSGLGDDVGANVGVSIGLGLGVDVGCTVGADVGHGLGAGLGA
NVDPGLGANMGPGLDTNMASGLGAAVGHGLGGNAGANVDPGLGAGVGVNVGCGLGDGVGH
GLGTDVGGGVGIGVGAGIRVNVGLGVAAGASADVGPNLGADIGAALGAGARDDIGAGLQA
NGGVDVGPSLGAGVALSVGANIGPGLGGGVRASVGLGIGAVGPALPSDVGAGVGVAVGAS
VGANLGAGVGTGVGVGLGANVGANVGSSLGSSVGLGLGAALGANVGSTLSSGVGPGVGLA
VGAAVGAGVGSSLGSGVGLAIGAGVGANVGSSLGSSVGLAIGAGVGANVGSSLGSGVGLA
VGAGVGANVGAALGSDVDVGVGLGVGTNVGSALASDVGSGVGLGIGAAVGANIGASVGSG
LGSGVGLGLGANVGSTVGSAPGSDVGAGIGLAVGASVGASSGSALGFAVGAALGANVGSG
LGPDIGTSVGLSLGANMGANIDSTLGTGVDAAIGLGVGATIGSGVGSGVGLGAGAAVGAS
AGSTLGSTIGLGPSLDPTLGSGVGLSVGAAVGANGGTGLGTGLGLGANLTPSIGSSLGPA
IGATLGATSRANAAVGLAVGARLVPGLGVPETPGGATETWTPPYTPRQAPPFAFGPPEPP
EAATEKLPPSPESPGGLPGGTPGSLLTPETSPPPPPPAPPGPALRRLLQGLAAAAATTTT
GVNRGGPRRSGGTPSPRPPPPPRSPRDPFAELYQLPQSRLQDAFRQAGSQRAPSF
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgggtccacctgggcgatgctgtgggtcctgccagggctaccacgggtccacgtgggca
aggctgtgggtgccaccggtgactccatgggtggtgctttgggtgctgggaccacctggg
tgccccagggctgtgggggaaccctgcgggcgaggcggcgggtgctggctgggtgctgac
gtgtgtccccatgcaggcccaacgcggggagcacccatggagctgctgggggggccggaa
ctggccgacctggtggcctcgctgcccgggttcctgctggccgtcacccgcgaggggaag
ctggtcggcgtcaccgacaacgtcgcgcagcacctggggcactccatggtggacctggtg
gcacaaggtgacagcatctacgacctgctggatccagctgaccacccgttggtgcgacat
cagctcaacctgcccgggcccccccaggcagagcgcctcttccgctgccgcttcaccacc
tcgcgggcctcgcgccgtcccagcgccgggcggaagctggtgctgctgcggggccgcttc
caggccccccctggaccccccggggcttctccggggcttttcgtcgccttctgcgcccca
ctggaccccccaccctggccctgccccgactgcctgctcctgcccgccttccagagccgc
catgcccgcgacctcgccctgctcgacgtctctgatagcgtcctgatccacctgggctac
gggcggggggagctcctgggtcgctcttggtaccggctcctgcaccctgaggaccttggc
cacgtcgcccgccagcacctccgcctcgcgggagcaggggcagaggtgcgaggggagctg
gtgacacggctgcagcgcaaggatggcctgggctggacatgggtctacgcccgcctgcgc
cctgagggcccggccctgctcgcccacaacttcgtcatcagcgaggctgaggcctggtgc
ctgcggcagcagctggcagctgaggcccccccgggcccccctgaacccttcggccccggc
cttgacttgcccggtgctggcatcggagctggtggggacctgggtgtcggcgccagtccc
ggcattggccttggtgttggtcctggcgttggctccagtgttgacctcagtgttggatcc
gggcttggagacgacgttggagctaatgttggtgtcagcattggccttggccttggcgtt
gacgttgggtgcaccgttggagccgacgttggacatggtcttggagccggccttggggcc
aatgttgaccctggtcttggagccaacatgggacctggtcttgacaccaacatggcgtct
ggtcttggagctgctgtcggacacggtcttggaggcaatgctggagccaacgttgaccct
ggtcttggagccggtgttggagtgaatgttggatgtggtcttggagatggtgttggacat
ggtctcggcactgatgtcggtggcggagttgggattggtgtgggagccggcatcagagtc
aatgttggccttggcgtggcagccggtgccagtgccgatgttggccccaacctgggggct
gatattggagctgctctcggagccggtgccagagatgacattggagctggtctccaagcc
aatggtggagtagacgttggccccagtctcggagctggcgtcgcactcagcgtcggggcc
aacattggacctggtctcggtggtggtgtcagagccagcgttgggcttggcattggggct
gttggccccgctcttccatctgatgttggtgccggtgttggagtcgccgttggtgccagc
gttggagccaacctaggtgctggagttggcaccggtgtcggagttggccttggagccaac
gttggagccaacgttggctccagtcttggatcctctgttggacttggccttggagctgct
cttggagccaacgttggctccactctttcatctggtgttggacctggtgttggacttgcc
gttggagctgctgttggagctggcgttggctcttctcttggatctggtgttggacttgcc
attggagctggtgttggagccaacgttggctcttctcttggatccagtgttggacttgcc
atcggagctggtgttggagccaacgttggctcttctcttggatccggtgttggacttgcc
gtcggagctggtgttggagccaacgttggtgctgctcttggatctgatgttgacgttggt
gttggacttggtgttggaaccaacgttggctctgctcttgcatctgatgtaggatccggc
gttggacttggcattggagctgctgttggagccaacattggtgccagtgttggctccggt
cttggatctggcgttggacttggcctgggagccaacgttggctccaccgttggctcagct
cctggatctgatgttggtgccggcatcggacttgctgtcggagccagcgttggagccagc
agtggctctgcccttggattcgctgttggagccgcgcttggtgccaatgtcggctccggg
cttggtcccgacatcggcacctctgttggactcagccttggagccaacatgggagccaac
attgactccacccttggaaccggcgttgatgctgccattggacttggcgtgggagccact
attggatccggtgttggatctggcgttggacttggtgctggagctgccgttggagccagc
gctggctctacccttggatccaccattggccttggccccagccttgaccctactcttgga
tccggtgttggcctcagtgttggagctgctgttggagccaacggtggcaccggactcggc
actggactcggccttggggccaacctcacccccagcatcggctcctccttgggccccgcc
atcggcgccacccttggagccaccagcagagccaacgccgctgtgggtttggccgtaggc
gcccgcctggtgccgggcctgggggtccccgagacgccagggggagccaccgagacctgg
acacccccctacaccccccggcaagctccgcccttcgccttcggccccccggaacccccc
gaagcagccaccgaaaaattaccgccgagtcctgagagtcccggggggctcccgggtggg
acccccgggtccctcctcacccccgagacgtcaccgcccccacccccgccggcacccccc
ggcccagctttgcgtcgcctgctccaaggattggccgccgccgccgccaccaccaccacc
ggcgtcaaccgcgggggacccaggcgttcgggggggacccccagcccccgcccgcccccc
ccgccccggtcgccccgcgaccccttcgctgagttgtatcaactcccccaaagccgcctc
caggacgccttccgccaagccggaagccagcgcgccccgtccttctga
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