Chroicocephalus ridibundus (black-headed gull): 134509789
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Entry
134509789 CDS
T10910
Symbol
SOX10
Name
(RefSeq) transcription factor SOX-10
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crid03000
]
134509789 (SOX10)
Transcription factors [BR:
crid03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
134509789 (SOX10)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sox_N
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
134509789
NCBI-ProteinID:
XP_063178441
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All DBs
Position
1:complement(163995880..164006880)
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AA seq
463 aa
AA seq
DB search
MADDQDLSEVEMSPVGSEDHHCLSPGPSMASDNSPHLTGSGNGEMGKVKKEQQDSEADDD
KFPVCIREAVSQVLSGYDWTLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQY
PHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKATQG
EGEGQVEGEAGGAAAIQAHYKNAHLDHRHPGEGSPMSDGHPEHSSGQSHGPPTPPTTPKT
ELQAGKADSKREGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPNGHA
GHPGHVGGYAAAAAAGYGLGSALAAASGHSAWISKQHGVSLSTATSSVVDSKAQVKTEGS
APGGHYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYPDHQPSGPYYSHSTQASGLYS
AFSYMGPSQRPLYTAISDPAPSVPQSHSPTHWEQPVYTTLSRP
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgaccaagacctttcagaggtggagatgagcccggtgggctctgaagatcac
cactgcctctcgccaggaccctccatggcgtcagacaactccccgcacctcaccggctct
ggcaacggggagatggggaaggtcaagaaggaacaacaagactcggaggcggacgacgac
aagttcccggtgtgtatccgcgaggcggtcagccaggtgctgagcggctatgactggacc
ctggtacccatgcccgtccgggtcaatggaagtaacaagagcaaaccccacgtgaagcgg
cccatgaatgccttcatggtttgggcacaggctgcccggaggaaactggctgaccagtac
ccacacctccacaacgccgagctcagtaagaccttggggaagctctggaggctgttgaat
gaaagcgacaagcggccctttatcgaagaggcggagcggctgagaatgcagcacaaaaag
gaccaccccgattacaagtaccagccccgccggcggaaaaacggcaaagccacgcagggc
gagggcgaaggccaggtggagggggaggccggcggggctgccgccattcaggcccactac
aagaacgcccacctggatcacaggcatcccggcgaagggtcgcccatgtccgatggtcat
ccagaacactcctcaggtcagagccacgggccccctacacctcctaccacccctaagact
gagctgcaggcaggcaaagccgactccaaaagagaagggcgttccctgggggaaggcgga
aagccacacattgactttggcaatgtggacatcggggagatcagccatgaagtgatgtcc
aacatggagacctttgatgtcaatgaatttgaccaatacctgccgcccaacggacacgct
ggccacccaggccatgttgggggctatgcagcagcggcagctgctggctacggcctcggg
agcgccctggctgcagccagtggacactctgcctggatctccaagcagcatggagtctcc
ttgtccactgccacttcatcggtggtggactccaaggcccaggtgaaaacggaggggtct
gcccctggaggtcactacaccgaccagccctccacctcccagatagcttacacatccctg
agtctgccccactacggttcggccttcccctccatctccaggccacagtttgactacccg
gaccaccagccctcgggaccctactacagccattccacccaagcctctggcctctactct
gccttctcctatatgggaccttcccaacgtcccctttacactgccatctctgaccctgca
ccctccgtgccacagtcccatagccccacacattgggaacagcccgtgtatacgactctc
tccagaccgtag
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