Chroicocephalus ridibundus (black-headed gull): 134510004
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Entry
134510004 CDS
T10910
Symbol
CFAP54
Name
(RefSeq) cilia- and flagella-associated protein 54
KO
K25553
cilia- and flagella-associated protein 54
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
crid03037
]
134510004 (CFAP54)
Cilium and associated proteins [BR:
crid03037
]
Motile cilia and associated proteins
Sperm associated proteins
134510004 (CFAP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
fn3
DDE_Tnp_1_3
zf-TFIIIC
Motif
Other DBs
NCBI-GeneID:
134510004
NCBI-ProteinID:
XP_063178825
LinkDB
All DBs
Position
1:complement(169701158..169813735)
Genome browser
AA seq
3189 aa
AA seq
DB search
MAEPFGPPLPASVPNPPPATFFGAVAPGNPVVESFEAELRDVLGFLRRLAGAGEAQPQQH
DLHRRGANTLFNIWIKYKPRLPEWYYNEKLLKVGDSLAQIKEYKLALLQCYGRYLQQFIS
VNPDDIIDDVHRFKSTFFPNGLRDKNAVLTFHALQERNVCIYQMVCNSDRNLQNQESLQT
CFDVLSSLRLAMQVALPQESLCWLIYNGTIHIYTICRHLMVIGQSAKVLEYLLWASICME
SSIPLLSVHYLTWRATLYTAVSQCYFDCQASIHGEIFARRGLIKIDELKQLSNISSSLEN
SETKKIFREATLKMSVMIFKRAVYESRRKPKSYFRPKLRVSLKEAQNLPWPRTATERLLT
EMFDSAAAQFLAILEALSDSSRHVLRPAPPVPDEIEIRDVISELFFAGLEILSGGMSSTG
IQGSYCTDHFGIINPSSTLLQLILTGEKGVSGDAAVKFIKLAFSYEEWDVFDSAIEFVVN
FLQAQDDPTWKKAEMELKLLTLMQPLLFPRKFKHGFSISENTTKEARLPHGSENKQTIGK
TSLRHGEPSHDLMILATTVYSCVSTSKQNIQPDKEILVDVTMFLWQKCKMGLQQIRLSGS
DCFKYIHKYKAYQWVRVLWIINEVIQKSIIADINVVILAEITLSLTTVLENVADSTSKSK
KKAGKRSASLRQDETCDIPEILMKSPEEQLQVAYENLEKAINGVNTSRLMTLLPDGKSIF
DNCCTKVDSNDQNLNFVLGCGNDKAGMGNGFVMDLHLELIQAQHRVAVKLLKMTQGAQKD
DRSLQSSKSHVKNIKDFSYLTEAFIMRKIKKNKLSRAIFLMQKAAQNFPKELTTSSQRQL
LEEALTLIEQVEAEQSALYQSLKEATSSKKKSRTPPPPLLLSRSHCSMTFKPAPFSSDTQ
VSWYSILGSVAGGRNMKVRLNNNKLPNAGEEIPADGKSLLEIQGLDPNEKYVFAVAAYSS
DGKLIGDAIGETTKPILAYPPLSATTVRAYLTEVAYQTGNYTLAREAFSPMWDYFVSNSS
PLPANAAVISASSNLTISENRLRFEAVSQTSPITLHLFLRNIFAVCDINIMEGALFCDSI
CSNEILYKEQVARLSECERMTVAIELSNCLNDASYTLQSVVQCYGLLAPIIYHKISSVPV
VQILIKCLSVLQEIPSATLQRRQAGCYESIQHMIACTSFYTAKVLRSWQEYELAVIIVNY
GKKLLDSSPAISPCQSGAVKTEETQTNKEVKTTSAKTSHLAAMEKATENLSALESNLLKL
TKPARGSELTGQEDPLFLYPVISCWTSNNAYREVMKFRKKSRFLEFFVQVLHKILNEEKF
QCVLEWAGNVQVYLKRRNDHLLCNNGISTQETSSPTLSEGMDRNTTGVVRFQKSVETSPL
KKPEASTLKKPRTEALSPIRRRQTLRQYLMKHPDITKCPEAQRKCKEELQKVARHTLVVL
LQPIVSDYLNRKKFHQICLEEMPWRSQMNIYLAVAHYNLFRKKLEEQYNIGICGSWHLDR
YNILDPEIFSLNNSGTVVVREAAENNMKTPTSFLLKKSAMTKKQTCTDKSSESSINLSGT
DTPRTQTTKDTEIPVSHSPKECKQFLSHTILLEHFTKIFLHLRRAVVLAHRGGHWTLLQN
ACRELWNYTQELQLIANHSHSDMDAFPITRGFLRNTIWLPFYLASDMIIDMITELQASRS
LKILDPEGDFSIPSCIGGITDENGGSNLHPQSPLDDVNVVDLKWICNLILKTIELLYQMK
KWEALVHIAVQFNIFTHERYTEQVSPLLVYAQRQLLERIQQFSGRDSHESHFIKHLSDNA
HKMSCRNYIGQKLQLPVAHSAHEQIFPGCFFYPEMKKDYTDCSQAKALVYVPLDVNDTLK
CFRETLQKSKYHSRSLRHSRKLLSLFLAHTQENAGRAISSHISSNRRLEFSVGPEMIFLP
TPHDISQEKFNFSSMVESKPIPQSQLSVIISSYEQTIGILEINNQRDLKVQALHELGNLH
FYAGNKRVAFKYWCQALDETLNIADALNNWQELGFPKNATDCFAVGRSTDISQKFLSQAG
VWGCLHAAVLVAKIAQYITTSKMRLRTKYCYFSAILFKTLFRASLPHPTSDCDFAQYETN
MLIPGIDLFSDRYRADISTVVASLNFLMFELHCAKQNLIILPLFTLYQYIVSEICKDPAK
CIEGRIFKIKVLTDIGFFMEAFHELSLLNCGERIPWKIPAGYRKTEQKKALQKFDSSESL
LSVTNLQVLEDIFNWSLSLTMVPLCNQQIMNKLTLAKMHFIICLSATINNIPEKVEKHVY
SVESKSLKEPSKIRASDVKVDADKNSRQQEQRGTMMQLVDCKDELNMAMLKGILLTEAEE
SLSHLVQNIQDKYNGEISWCSAEDLETLIEAKLQLAAISQQRHQAAFTVALAFSAIQLLQ
DAKIFRIEVTHFQEEKDERECSDSYVKDVQLPHSTTAQDHMNVHLWLRCRTTLVTALVTQ
IHGVCDIDENDVAERRSLIKEAIIEAEAFGDTEAQAEMMVQATILDLQEKRPMTGIKLLL
ENIISLLQEDTFISPPASLTLVKSMLLLADILTLQTAEDTEHCSSTVEPLNLLILAHELT
VKAIFVCGEPIERHIEDSTLTCLALPTKNIYLPHINLLAQVKMRIGQTLAEKVACTPERR
DPLPWLRALKHLESALRLCRASATKKLDMEAELLFQIGKVERQITEAGNSKSSRAAETLL
KAIELSQQHDQKYELIRRSYLEIALLYLHFATNSEDVSQTDKMVPSKSKISSGELSSEQA
RKSEGYKVQAWIAVRAATQVSEAALASQLLIGMKSVKEHSMEDAVQQKIPEFAFMDLLAS
YRDFLSDGYNVVSESPKASSTENKQITQDKQSQSEGRESLATKANQKKETITWVHLIRYH
SYLKRLYNTNLLFAAPNSGPGSLSARDGHLSSVFDTGIVLRIAEMHSFLKKHLFEYSLCC
LENFPEELHDVELRLGRPADSLKMSLEITGTTSNMSHVRIASPVPVITEADSQTESRAAN
ASNKEINIQWYIPSLAKPSNDTETKVLLLYAYNTKPVKISNIKIFSSMSIFSGHLWIPLA
RIISLREQLSNLKQQVEMLMQSSKTLSSASEPTRFLEESEILKRIPSKKPQMNVAKVHLD
EKTEEMAKRCLSEVKALLSVVPALSLPLTEIPFDVTLQSIASLEDMFDPASGCIIIEESL
FNWIISLFH
NT seq
9570 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcccttcggcccgccgctgcccgcctccgtcccgaaccccccgccggccact
ttcttcggggccgtggcgccgggcaacccggtggtagagagcttcgaggccgagctgcgg
gacgtcctgggcttcctgcggcggctggcaggcgcgggagaggcccagccgcagcagcac
gacctgcaccgccgcggagcaaatactttgtttaatatttggatcaaatataagcctcga
ctgccagagtggtattacaatgaaaaacttctgaaagttggtgattcccttgctcagatc
aaagaatataagttagcacttctacagtgctatggaaggtaccttcagcagttcatttct
gtaaaccctgatgacatcatagatgacgtgcatcgatttaaatccacctttttcccaaat
ggtttgagagataaaaatgcagtacttacgttccacgcgttgcaagagagaaatgtttgc
atttatcagatggtttgcaacagtgacagaaatctccagaatcaagagtccctgcagact
tgtttcgatgtcttgtcctcattacgactcgctatgcaagtggctctgcctcaggagagt
ttgtgttggcttatctacaatggtactattcatatttacaccatatgcagacatttgatg
gtgataggtcagtctgctaaggtcctggaatacttactgtgggccagtatatgtatggaa
tcatccattccactcttatctgtacattatttgacgtggagagcaaccctatatactgca
gtttctcagtgttactttgattgccaagccagcattcatggagagatatttgctcgccgt
ggtctgattaaaattgatgaactgaagcaattatcaaatatcagttcttcgttggaaaat
tcagagacaaaaaagatttttagagaggccactctaaagatgtcagtgatgattttcaag
agagcagtatatgaatccagaagaaagccgaaaagctactttcgacctaagttaagagtt
agcctgaaagaagcacaaaatctgccgtggcctcgcactgctactgaacggctgctgaca
gaaatgttcgacagtgccgcagctcagttccttgccatcctggaagctctgtctgatagt
agcaggcatgtgttgcgccctgctccacctgttcctgatgaaattgaaattcgtgatgtc
atttcagagcttttttttgcaggcctggaaatcctctcaggtggaatgagcagtactggt
attcaaggaagctattgcactgatcattttggtataattaatccatcatcaacccttctg
caattgatactaacaggagaaaagggggtgtctggagatgctgctgtgaaatttataaaa
ttagctttcagctatgaagagtgggacgtgtttgattctgctattgaatttgttgttaat
tttcttcaggctcaagatgacccaacatggaagaaagctgaaatggaactcaaacttctt
acactgatgcaacctttactatttcccagaaaatttaaacatggtttttctattagtgaa
aatactaccaaagaagctaggctgcctcatggttctgaaaacaagcaaacaattggaaag
acttccttaaggcatggagagccttctcacgatcttatgattttggcaacaacggtgtat
tcctgtgtctccacatctaagcagaatatccaacctgacaaggaaatacttgttgatgta
acaatgtttttgtggcagaagtgtaaaatgggacttcagcaaatccgactgagtggaagt
gactgcttcaaatatatccacaaatacaaagcttaccaatgggttcgtgtactctggata
ataaatgaagtaattcagaagagcatcatagcagacattaatgttgtaatacttgcagag
ataaccttatctctaaccacagtattggaaaacgtagctgattctacaagtaagtcgaag
aaaaaagcaggaaaaagaagtgcctctctccggcaagatgaaacctgtgatattcctgaa
atactgatgaaaagtcctgaagaacaattacaagttgcttatgaaaatcttgaaaaagca
attaatggagtaaacacatctcgcttaatgacccttctaccagatggaaagtcgatattt
gacaactgctgtacaaaggtggactcaaatgatcagaatttgaattttgttttgggatgt
ggtaacgataaggcaggaatgggtaatggttttgtaatggatttgcacttggagctcatt
caggcccaacatcgagtagctgtgaaacttcttaaaatgacacaaggtgctcaaaaggat
gacagaagtcttcagtctagcaagtctcatgtgaagaatattaaagatttcagttattta
acagaggcatttataatgagaaaaataaaaaagaataagctatctagagcaatctttttg
atgcaaaaggctgcacagaatttccctaaagagttaaccacttcttcccaaaggcagcta
ctggaggaagcgctaactttaatcgagcaagttgaagctgaacaaagtgcattgtatcag
agtctcaaagaagctacgagcagcaagaaaaaaagcaggactcctcctcctcctctgtta
ctttctagatcacattgctccatgacatttaagccagccccattctcttcagatactcag
gtttcgtggtacagtattttgggctctgtagcgggaggaaggaatatgaaagtaaggtta
aataacaataaacttccaaatgcaggagaagagataccagctgatgggaaaagcctcttg
gaaatacagggcttagatcccaatgagaaatacgtatttgcagtcgcagcatattcttct
gatggaaaacttattggtgatgccattggggaaacgactaagccaatccttgcatatcca
cctctttctgctactactgttcgagcctatctaactgaggtagcctatcagactggcaac
tacacattagccagagaagcattttcaccaatgtgggattattttgtttcaaattcttct
ccactgcctgccaatgcagctgttatttctgcaagtagcaatttgactatatctgaaaac
aggttacgttttgaagctgtatctcagacttctcctattaccttgcacctctttctgagg
aatatatttgctgtctgtgacattaatatcatggaaggagcactcttctgtgattccatc
tgttccaatgagatactttataaggaacaagttgctagattatcagaatgtgaaagaatg
actgtggcaattgaacttagcaattgtttgaatgatgcaagttataccctgcagtctgtt
gtacaatgttatggtctccttgctccaattatttaccacaagatttcttcagtgccagta
gttcagattctcattaaatgcttgtctgtccttcaagaaattccaagtgctactttgcag
aggaggcaggcaggatgttacgagagtattcagcatatgatagcttgtacttcattttat
acagcaaaggtactacgttcatggcaagaatatgaactagctgtaattattgttaactat
gggaaaaaattgttggattcctcgccagcaatctcaccctgccagtcaggagctgtgaaa
actgaagaaacacagactaacaaagaggttaaaaccacttctgcaaagacatcccattta
gctgcaatggaaaaagcaacagaaaatctaagtgctcttgaatcaaatctcctcaaactg
acaaaaccagctcgtggatcagagcttacaggacaggaagatcctttgttcctctaccct
gtaatttcatgttggacatcaaacaatgcgtatcgagaagtgatgaaattcagaaagaaa
tcgcgttttcttgagttctttgttcaagttttgcacaaaatcctgaatgaagagaagttt
caatgcgttctggaatgggcaggcaatgtgcaagtttacttgaaaaggaggaatgaccac
cttctctgtaataatggaatttcaacacaagaaacaagttctccgactctgtcagaaggc
atggacagaaacactacaggagtggtgaggtttcagaaaagtgtggagacctcaccttta
aagaaaccagaggcatcaactttgaagaaaccaagaacagaagccttgagtcctattcga
agaagacagactcttagacagtatttaatgaaacatccagacataacgaaatgtccagaa
gcacaaaggaaatgcaaggaagagttgcaaaaagtagctcgccacaccttagtagtactt
ctgcaaccaatcgtgagtgattacttaaaccgaaagaagtttcatcaaatatgtcttgaa
gagatgccgtggaggtctcagatgaatatctatctggcagttgcacactacaacttattt
agaaagaaactggaagagcaatataatattggaatttgtggttcatggcatctggacagg
tacaatattttggatcctgaaatattctcattaaataattctggcactgtagtggtgaga
gaagctgcagagaataacatgaaaacaccaacttcttttctccttaaaaagtcagcaatg
accaaaaaacaaacctgtacagataaatcttctgagtccagcattaacctgagtggaaca
gatactcctcgaactcaaacgacaaaggatacagaaatacctgtctctcattcccccaaa
gaatgcaagcagtttctgtcacataccattttattggagcattttacaaaaatctttttg
catttaagaagagcagtggttcttgctcaccgtggtggccactggacgttgcttcaaaat
gcttgtcgagaactttggaactatactcaagaattacaattgattgctaaccattcacat
tccgatatggatgcatttcccattaccaggggttttcttaggaacaccatctggttgcca
ttttatttggcatcagacatgatcattgatatgataactgaactacaagcaagcaggtct
cttaagattttggatcctgaaggagacttctccattcccagttgtataggaggtattact
gatgagaatggtggttctaatctccatccacagtctcccctggatgacgtgaatgtggtt
gacttgaaatggatatgtaatctgattcttaaaacaatagaattgctatatcaaatgaag
aagtgggaagcactggtacacatagctgtgcaatttaacatatttacacatgagagatac
acagaacaagtgagtccactgctggtgtatgctcagaggcagctgctggaaaggatacag
caattcagtggccgtgacagccatgaatctcatttcataaaacatctatctgataatgca
cataagatgagttgcagaaactacatagggcagaaattacagctgcctgtcgcccattct
gctcatgaacagatttttcctgggtgctttttctatcctgagatgaaaaaggattataca
gattgcagtcaagcaaaagctctagtttatgtacctctcgatgtgaatgatacactgaaa
tgttttagagaaactctacaaaaatctaaatatcacagcagatcattgagacacagcaga
aaactactttcattatttcttgcgcacacacaagaaaatgctggaagagcaatcagcagt
catatctcttcgaacagaaggctggaatttagtgtgggacctgaaatgatatttctacca
acaccacatgacatttctcaagaaaaattcaatttctccagtatggttgagagtaaacca
ataccacagtcacagctttcagtcattatctcttcctatgaacaaacaattggaatcctt
gaaataaacaaccagagagacctcaaggttcaggctctacatgaacttggaaatcttcac
ttttatgctggaaacaaaagagttgcttttaaatattggtgtcaagcccttgatgaaaca
ctcaacatcgctgatgctcttaacaactggcaagagttaggttttccaaaaaatgctaca
gactgctttgcagttggaagatcgactgatattagtcagaagtttctttctcaggctgga
gtttggggatgtttacatgcagcagtcttagtggctaagatagctcagtatataacaaca
tcaaagatgagattaagaactaaatactgctatttttctgctatactttttaagaccctg
tttagagcttctcttccacatccgacatctgactgtgactttgcacaatatgaaacaaat
atgcttattcctggtattgacttgttctctgatcgctacagagctgatatctccactgtg
gttgcaagtctgaatttccttatgtttgaactacattgtgcaaaacaaaatttaataatt
ttaccattgttcacattataccagtatattgtttctgagatttgtaaggacccagctaaa
tgtattgaaggaagaatcttcaagattaaagtacttacagatataggattttttatggag
gccttccatgaactgtctttgcttaattgtggagagagaattccatggaaaatacctgca
ggatacagaaaaactgaacaaaagaaggctttacagaaatttgactcctcagaatctctc
ctgtccgttacaaatttacaggtactggaagacatatttaattggagtctgtctttaaca
atggtgccattgtgcaaccaacaaattatgaataaattaacgttagccaaaatgcatttc
atcatttgcctttctgccacaataaataatatacctgaaaaagtggaaaaacacgtctat
tctgttgagagcaaaagcttgaaggagccaagcaaaatcagagcatcagatgtaaaagtt
gatgctgataagaattcaagacaacaggaacaaagaggcacaatgatgcagctcgttgac
tgtaaagatgaactaaatatggccatgctgaaggggattttattgacagaagctgaagaa
agtcttagccatcttgtacagaacatacaggacaaatacaatggggagatatcttggtgt
tctgctgaagatttagagacacttattgaggccaaacttcagcttgctgctatttctcag
caaaggcatcaagcagctttcactgttgctttggctttctctgcaattcaacttctccaa
gatgcaaaaatttttaggattgaagtgacacattttcaagaagaaaaggatgaaagggag
tgttcggactcttacgttaaagatgttcaactgcctcacagtacaacagcacaagatcat
atgaacgtacatctgtggctaaggtgtcgtacaacgttagtgactgcactagtaacacag
atacatggcgtttgtgatattgacgaaaacgatgtggccgaacgcagaagtctcataaaa
gaagcaataatagaggcagaagcctttggagatacggaggctcaggctgaaatgatggtg
caagctactattcttgacctgcaagaaaaacgtcccatgacaggcattaaacttcttttg
gagaatatcatcagtttactccaagaggatacatttatttcccctccagcttctttgact
cttgtgaaaagtatgcttctgctggcagacatactaacactccaaacagcagaggataca
gaacattgctcttctacagtggaaccattaaacttactaattttggcacatgagcttacc
gttaaagcaatttttgtttgtggagaacccattgaacggcatatagaagacagtacattg
acttgcctggccctacctacaaaaaatatctacttgccacatatcaacttgctagcgcaa
gtcaaaatgagaatcggacagacattagctgaaaaagtagcttgtacgcctgaaagaaga
gatccactgccgtggctacgtgctctcaaacatctagaatcagcattgaggctttgcaga
gcatctgctacaaaaaaattagatatggaagctgaacttctttttcagataggtaaggta
gaacgccagataactgaagcaggcaatagcaagtcatctcgagctgctgaaaccctgttg
aaagctatagaactcagccagcaacatgatcaaaaatatgagttaataagaagatcatac
cttgaaatagcactattgtatttgcattttgccacaaatagtgaggatgtgtcacagaca
gataagatggtgccttccaaatcaaaaatctcttctggagaactctcttctgagcaggcc
cgaaaatcagaaggctacaaagtacaagcctggattgcagtaagagcagctacacaggtt
agtgaagctgcgcttgcttctcagctattaattggaatgaagagtgttaaagaacacagc
atggaggatgcagtgcaacagaaaatcccagaatttgctttcatggatcttcttgcttcg
tacagagatttcttatctgatggatacaacgttgtctctgaaagtcccaaagcatcttct
actgaaaacaaacaaatcacacaagacaagcagagccaaagtgaaggaagagaaagtctt
gccaccaaggccaaccagaagaaagagacaataacatgggttcacttaattcgctaccac
agttatttaaaaagactttataacacaaaccttctatttgctgcccctaactcaggacct
ggatcactttctgcaagagatggacaccttagttccgtttttgacacaggaattgttcta
cgcatagcagaaatgcattcatttcttaaaaagcatttgtttgaatattcactgtgttgt
cttgagaatttcccagaagagctacatgatgtagaattgcgacttggtaggccagctgat
tctttaaagatgtcacttgaaattactggaactacatcaaatatgtcacatgtgagaata
gcttctccggttcctgtcatcacagaagcagacagtcagacggagagtagggcagcaaat
gcttcaaataaggaaattaacattcagtggtacattccttctctggcaaagccatcaaac
gatacagagactaaggttttactgctctatgcttataatacaaagcccgtcaagattagc
aacatcaagattttcagttcaatgtctattttttcaggccacttgtggattccgttggct
agaattatttctttacgggagcaattatctaatctgaagcagcaagttgaaatgttgatg
caaagttctaaaaccttgtcttcagcttcagaacctacacgttttcttgaagaaagtgaa
attttgaaaagaattccttcaaaaaaaccccaaatgaatgttgcaaaagtacatcttgat
gaaaaaacagaagaaatggctaaaaggtgtttatctgaagtcaaagcactgctgtctgtt
gttccagccctgtccttgccattaactgagatcccatttgatgttactttgcaatcaata
gcaagtttggaagatatgtttgatcctgccagtggatgtataataattgaagaaagtctt
ttcaactggatcatttctctgtttcactaa
DBGET
integrated database retrieval system
