Chroicocephalus ridibundus (black-headed gull): 134510176
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Entry
134510176 CDS
T10910
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
Enzymes [BR:
crid01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134510176 (PDZRN4)
Ubiquitin system [BR:
crid04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
134510176 (PDZRN4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134510176
NCBI-ProteinID:
XP_063179207
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Position
1:complement(188443707..188691896)
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AA seq
1040 aa
AA seq
DB search
MGFDPSRFAAPVAAELQCQLCRRVLEEPLSTPCGHVFCAGCLLPWAARRRRCPLSCRPLA
AAELRPVLPLRSLVQKLEVKCDYSPRGCGRTVRLRELPAHLAACRYGPAATGTAEPEPRG
GRTPGRSGGGSAGEPRPRAEWGQRCLRALRGGSGGGGGAGAGAELKREALRWSRREKSLL
AQLSALQSEVQLTARRYQAKFGQYMSHISSITRDLAGSQPGKGGEPKPLTIMLHRENDTL
GFNIIGGRPNQNNQEESAEGIYVSKILENGPADKAEGLQIHDKIIEVNGKDLSKATHEEA
VEAFRNAKEPIVVQVLRRAPISKAHGSSQDVRLVDASTQTDITFEHIMALAKLRPSTPPV
PDICPFLLSDSCHSLHPVEHEFYEGNEYLSSLPADADRAEDFEYEEVELCRISSQEKLGL
TVCYRTDDEEDTGIYVSEVDPNSIAARDGRIREGDRILQINGQDVQNREEAVALLSSEEC
KKIVLLVARPEMQLEEGWLDDERNEFLEELNLEMLEEQHNEAMQYTANEVEQPKKHEEED
GTTDTATSSSNNHEKDSGVGPTDESLRNDESSEQENAPEEQNSATLQSKRELGHSQDTLG
SVELQCNESFVSGEYIESDFIGNPEEECERFRQLLELKCKIRNHGEYDLYYSSSTIECNR
RDQDGVEHELQLLNEELRNIELECQNIMQAHRLQKVRDQYGDIWALHDEGFRNYNTSIDV
QRGKLDDIMEHPEKSDKDSSSAYNTAESCRSTPLTVERSPDNSLQRMISITNRKNLRSTI
VANQPPSGQSNRETTSAKTKPTEQNSAAEDAVLASESGKFTDQEKQSSEHIPYLSPYHSS
SYRYGNIPAHAKHYQSYMQLIQQKSAVEYAQSQLSLVSMCKDSQKCAEPKMEWKVKIRSD
GTRYITKRPVRDRILKERALKIKEERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQ
RRRREFMMRSRLECLKESPQSGSEGKKEINIIELSHKKMMKKRNKKILDNWMTIQELMTH
GAKSPDGTRVHNAFLSVTTV
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgacccgtcgcgcttcgcggcgccggtggcggcggagctgcagtgccagctg
tgccggcgggtgctggaggagccgctgtccaccccgtgcggacacgtcttctgcgccggc
tgcctgctgccctgggcggcgcggcggcggcgctgcccgctgagctgccggccgctggcg
gccgccgagctgcggcccgtcctgcccctccgcagcctggtgcagaagctggaggtcaag
tgcgactacagcccgcggggctgcggacgcaccgtgcggctgcgggagctgcccgcacac
ctcgcggcgtgccgctacgggccggcggccaccggcaccgccgagccggagccgcggggc
gggcggacccccgggcgctcggggggcggctccgccggggagccgcggccgcgggcggag
tggggtcagcgctgcctgcgggcgctgcggggcggcagcggcggcggcggcggcgcgggg
gccggtgcggagctgaagagggaggccctgcgctggagcaggagggagaagtcgctgctg
gcgcagctctcggcgctgcagagcgaggtgcagctgacggcgcggcggtaccaggcgaag
ttcgggcagtacatgagccacatcagcagcatcacccgggacctggcgggcagccagccc
ggcaagggaggagaacccaaaccattaacgatcatgctgcaccgagaaaatgatactttg
ggattcaatattataggaggacgacccaatcagaacaatcaggaggaatctgctgaggga
atttatgtgtcaaagattttggaaaatggacctgcagacaaagcagaaggcctgcaaatt
catgacaagattattgaggtcaatgggaaggacctctccaaggccactcacgaagaggca
gtggaagcttttcgcaatgccaaggagccaatcgtggttcaggttttacgacgagcccca
attagcaaagctcatggtagctctcaggatgttcggcttgtggatgccagcactcagact
gacatcactttcgagcacatcatggctctggccaaactgaggccttccacaccaccagtt
cctgatatctgcccttttctactttcagacagctgccattctcttcacccagtggagcat
gaattttatgaaggtaatgagtatctttccagcctgcctgctgatgcagatagagcagag
gactttgagtatgaggaggtggagctgtgccgcattagcagccaggagaagctggggctg
actgtctgttacagaaccgatgatgaagaggacacggggatctatgtcagcgaggtggat
ccaaacagcattgctgccagagatggccggatccgtgaaggagaccgcattttgcaaata
aatggccaagatgtccagaatcgggaagaggcagtggcattgctctccagcgaagaatgc
aagaaaattgtgttgctggtcgcaagaccggagatgcagctggaagaagggtggctggat
gatgaaaggaatgaattcttagaggagttaaacttggaaatgttggaagagcagcataat
gaagcgatgcagtacacagccaacgaggtggagcagccaaagaaacatgaagaggaggac
ggcactacagacactgcgacctcatcatccaacaatcatgagaaggacagtggggtggga
cctacagatgaaagtttgcgtaatgacgagagctcggagcaagaaaatgcacccgaggag
cagaacagcgcaaccctgcagagcaaacgggagctgggccacagccaagacacattagga
agtgttgagctccagtgcaatgaaagctttgtgtctggggaatacattgagtctgatttc
ataggaaacccagaggaggaatgtgaaaggtttcgacagctgttggaactgaagtgcaag
attcgaaaccacggggagtacgacctgtattactcgagcagcacgatagagtgcaacaga
agagaccaagatggagtggagcatgagctgcagctactgaatgaggaactgaggaacatt
gaacttgaatgtcagaatattatgcaagctcaccggctccaaaaggtgagggatcagtat
ggagacatttgggctttacatgacgaagggttcaggaattacaacaccagcatagacgta
caaagaggcaaactggatgacatcatggagcaccctgagaaatccgacaaggacagctcc
agtgcatacaacacggccgaaagttgcaggagcactccgctgactgtggagcgatcccct
gataactctctccagaggatgatcagcataaccaacaggaaaaacctgaggagcacaata
gtggctaatcagccaccctcaggacaaagtaacagggagacaacctcagccaaaaccaaa
cccactgagcaaaacagtgctgctgaggatgcagtgctggcatcagaaagcggcaaattc
acagaccaggaaaagcagagcagcgagcacattccctacctgtctccatatcacagctct
tcttacaggtatgggaatatacctgctcatgcaaagcattatcaaagttatatgcaactg
atccagcagaagtctgctgtggagtacgcccaaagccagctcagcctggtgagcatgtgc
aaagactcgcagaagtgtgcggagcccaagatggaatggaaagtgaaaataaggagcgat
gggacgaggtacatcacaaagagaccagttcgagacagaatcctgaaggaacgtgcctta
aaaattaaagaggagcgcagtggaatgacgacagatgatgacacgatgagtgagatgaag
atgggtcgctactggagcaaagaagaacggaagcagcatttggtgcgagctaaggagcag
aggaggcggcgggagttcatgatgaggagcaggctggagtgtcttaaggaaagtccacag
agtggcagcgagggcaaaaaggaaattaacattattgaactgagtcacaaaaagatgatg
aaaaagagaaacaagaaaatcttggacaactggatgacaatccaagaactgatgacacac
ggtgcaaaatctccagatggcacaagagtgcacaatgcctttttatcagttactactgta
tga
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integrated database retrieval system
