Chroicocephalus ridibundus (black-headed gull): 134510217
Help
Entry
134510217 CDS
T10910
Symbol
CFTR
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid02010
ABC transporters
crid04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
134510217 (CFTR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
134510217 (CFTR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crid02000
]
134510217 (CFTR)
Enzymes [BR:
crid01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
134510217 (CFTR)
Transporters [BR:
crid02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
134510217 (CFTR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFTR_R
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_21
T2SSE
RsgA_GTPase
DUF87
MeaB
NTPase_1
AAA_23
Motif
Other DBs
NCBI-GeneID:
134510217
NCBI-ProteinID:
XP_063179311
LinkDB
All DBs
Position
1:193409961..193503918
Genome browser
AA seq
1485 aa
AA seq
DB search
MQRSPLEKANIFSKLFFRWTKPILRKGYRRRLELSDIYQIPSADSADNLSEKLEREWDRE
LATSKKKPKLINALRRCFFWKFMFYGILLYLGEVTKSVQPLLLGRIIASYDPDNSDERSI
AYYLGIGLCLLFLVRTLLIQPAIFGLQHIGMQMRIAMFSLIYKKILKLSSRVLDKISTGQ
LVSLLSNNLNKFDEGLALAHFVWIAPLQVALLMGLLWDMLEASAFAGLTLLIVMAFFQAW
LGQMMMKYRNKRAGKINERLVITSEIIENIQSVKAYCWEDAMEKMIESIRETELKLTRKA
AYVRYFNSSAFFFSGFFVVFLAVLPYAVTKGIILRKIFTTISFCIVLRMTVTRQFPGSVQ
TWYDSIGAITKIQDFLLKKEYKALEYNLTTTGVELDKVTAFWDEGIGELFVKANQENNNS
KAPSTDNNLFFSNFPLHASPVLQDINFKIEKGQLLAVSGSTGAGKTSLLMLIMGELEPSQ
GKIKHSGRISFSPQVSWIMPGTIKENIIFGVSYDEYRYKSVISACQLEEDISKFPDKDYT
VLGEGGIILSGGQRARISLARAVYKDADLYLLDSPFGHLDIFTEKEIFESCVCKLMANKT
RILVTSKLEHLKIADKILILHEGSCYFYGTFSELQGQRPDFSSELMGFDSFDQFSAERRN
SIITETLRRFSIEGEGMGSRNEMKKQSFKQTSDLNDKRKNSIIINPLNASRKFSVVQRNG
MQVNGIDDGHNDPPERRLSLVPDLEQGEVGLLRSNMLNSDHMLQGRRRQSVLNLMTGTSV
NYGPNFPKKGSTTFRKMSMVPQTNLSSEIDIYTRRLSRDSVLDISDEINEEDLKECFTDD
AESMGTVTTWNTYFRYVTIHKSLVFVLIFCVTVFLLEVAASLAGLWFLKKIASKVNTTQS
ENGTSDKPPVIVTDTSSYYIIYIYVGVADTLLAMGIFRGLPLVHTLITVSKTLHQKMVHA
VLHAPMSTFNSWKAGGILNRFSKDTAILDDLLPLTVFDFVQLILIVIGAITVVSILQPYI
FLASVPVIAAFIVLRAYFLHTSQQLKQLESEARSPIFTHLVTSLKGLWTLRAFGRQPYFE
TLFHKALNLHTANWFLYLSTLRWFQMRIEMIFVVFFIAVAFISIITTGDGPASVGIILTL
AMNIMGTLQWAVNSSIDVDSLMRSVGRIFKFIDMPTEETNTIKPQKNNQLSDALVIENRH
AKEEKNWPSGGQMIVKDLTAKYSEGGAAVLENISFSISSGQRVGLLGRTGSGKSTLLFAF
LRLLNTEGDIQIDGVSWNTVSVQQWRKAFGVIPQKVFIFSGTFRMNLDPYGQWNDEEIWK
VAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLD
PVTSQVIRKTLKHAFANCTVILSEHRLEAMLECQRFLVIEDNKLRQYESIQKLLNEKSSF
RQAISHADRLKLLPVHHRNSSKRKPRPQITALQEETEEEVQETRL
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggtcccccctggagaaggcgaacatcttctccaaacttttcttcagatggaca
aaaccaattttgagaaagggttacagacgacggttggagctgtcagatatttatcaaatc
ccttctgcggactctgctgataatctttctgaaaaactagaaagagagtgggacagagag
ctggcaacttcaaagaaaaaacccaaacttattaatgctcttcggcgatgctttttctgg
aaatttatgttctatggaatattgctatatttaggggaagtcaccaaatctgtgcagccc
cttctgctgggaagaataatagcttcctatgatccggacaactctgatgaaagatccata
gcgtactacctgggcattggcttgtgccttctcttccttgtgagaacactactcatacag
cctgctatatttggtcttcagcatataggaatgcaaatgaggatagctatgtttagcttg
atttataagaagatcttaaaactgtcaagcagagttcttgataaaataagtactggacaa
ctggtcagtcttctttccaacaatctgaacaaatttgatgagggtcttgctctggctcat
tttgtatggattgcacctttacaagtggcgctgctgatgggtctgctctgggatatgtta
gaagcttctgcatttgctggacttactcttctaatagtcatggcctttttccaagcctgg
ctgggacaaatgatgatgaaatacaggaataagagggcaggaaagatcaatgagagactt
gtcatcacctcagaaataattgaaaatatacagtcagttaaagcctattgttgggaagat
gcaatggaaaaaatgattgaaagcatccgtgaaactgagctgaagctaacccgaaaagct
gcttatgtgagatatttcaacagctcagccttcttcttttcaggcttttttgtggtgttt
ttagctgtgcttccatatgctgtgactaaaggaattattctccgaaaaatatttaccacc
atttccttctgcattgttcttcgaatgacagtgaccaggcagtttcccgggtctgtacag
acctggtatgactctattggagcaataaccaaaatacaggatttcttgctgaaaaaagaa
tataaagccctggagtataatctaacaaccactggggttgagctggacaaagtaacagct
ttttgggatgagggaattggagagctgtttgtaaaagcaaaccaggaaaacaacaacagc
aaagctcccagcactgacaacaatctcttcttcagtaattttccccttcatgcctctcct
gttcttcaggatataaatttcaagattgagaagggacagttattagctgtttctggatct
actggagcaggcaagacttctcttctgatgttgataatgggagaattggagccttcacag
ggtaaaattaaacacagtgggaggatatccttttcacctcaagtctcctggatcatgcct
ggaacaataaaagaaaacataatttttggtgtatcctatgatgaataccgatacaagagt
gtcatcagtgcctgccaactagaagaggacatttccaagttcccagacaaagattataca
gtgctgggtgaaggtggaatcattctgagtggaggccagcgagcacgaatctcactagca
agagcagtgtacaaagatgctgatttgtatctcctggattctccttttggacatttagac
attttcacagaaaaagagatatttgaaagctgtgtgtgcaagttgatggcaaataaaact
aggatcttggttacttcaaaactggaacatttaaagattgctgacaaaatattaatttta
catgaggggagctgctatttctatggaacattttctgaacttcagggtcaacggccagac
ttcagctcagagctgatgggatttgattcttttgatcagttcagtgcagagagaagaaat
tcaattataaccgagactctccgacgattttccattgaaggagaaggcatgggatcacga
aatgaaatgaagaagcaatcttttaaacaaacatcggatcttaatgacaaaaggaagaac
tccataattattaacccccttaatgcaagtaggaagttctcggtagtgcagaggaatggg
atgcaggtcaatgggatagacgatggccacaacgacccaccagaaaggaggctctcactg
gtacctgacttggagcaaggagaagtcggactgcttcggagtaacatgctaaactctgac
catatgctgcaaggtcggaggaggcaatctgtgttaaatctaatgacggggacctctgtg
aactacggaccaaactttcccaaaaagggaagtacaacatttcgtaaaatgtcgatggtg
cctcagacaaacctgtcttctgagatcgatatctacaccaggcgcttgtctcgagacagt
gttctggacataagtgatgaaatcaatgaagaggatttgaaggaatgctttactgatgat
gctgaaagcatgggcactgttaccacatggaatacctatttcagatacgttaccatccac
aaaagcttggtttttgttctaattttttgtgtgactgtcttcttactagaggtagctgca
tctcttgctgggttatggtttcttaaaaagatagcttcgaaagtaaacacaacacaatca
gaaaacggtacctctgacaaacctcccgtgattgtcactgacactagcagctactacatc
atttatatctacgtgggagtggcagataccctgcttgccatgggaatcttcagaggtttg
ccccttgtgcatacgcttataacagtgtctaaaactcttcatcaaaagatggtgcacgca
gttcttcatgcacctatgtcaacattcaactcttggaaagcaggtggtatacttaacaga
ttctcaaaagatacagcaatactggatgacttacttccacttacagtatttgacttcgtt
cagttaatactgattgtgattggcgctataacagtagtctcaatattacaaccctacatc
ttcctggcatcagtgcctgtgatagcagcctttattgtgttaagggcatacttcctccac
acttctcagcagctgaaacaactggaatctgaagctcggagtccaatattcacccatctc
gttacaagcttaaaagggctgtggacactgagagcttttgggcgtcagccgtattttgag
accttatttcacaaagccctgaacctacacacggcaaactggttcctctacctgtcaacg
ctgcgctggttccagatgaggatagaaatgatttttgttgtcttttttattgctgtggca
ttcatctctatcataactacaggtgatggaccagctagtgttggcatcattcttacttta
gctatgaatatcatgggaaccttgcagtgggcagtaaactcaagtatagatgtggatagt
ttgatgcggtctgtcggacgcatatttaaattcattgacatgccaaccgaagagacgaat
accattaagccacagaagaataaccagctttcagatgcccttgtaattgaaaacaggcat
gcaaaggaagagaagaactggccatccgggggccaaatgattgtgaaggaccttacagcc
aaatacagtgaaggaggagctgctgtgttagaaaacatttctttttcaataagttcaggg
cagagggtgggccttttaggaagaactggttcaggaaaaagcactttactttttgcattt
ttaagactgctgaatacagaaggggatatccagattgatggagtctcctggaacacggtc
agcgtgcagcaatggaggaaggcatttggagtgattcctcagaaagtgttcatattttct
ggaacttttcggatgaatttggatccttatgggcagtggaatgatgaagaaatatggaaa
gttgcagaggaggttgggctgaagtccgtaattgagcaatttccaggccagcttgatttc
gttcttgtggatggaggctgcgtcctcagtcacggtcacaaacagctgatgtgccttgcc
cggtcggttctcagcaaagctaaaatcttgctgctggatgaaccaagtgctcacctggac
cctgtaacttcccaagtgatcaggaagactctgaagcatgcgtttgccaactgcacggtg
atactctccgaacacaggctggaggcaatgctggagtgccagcgatttttggtaatcgag
gacaataaattgcggcagtatgaatccattcagaagcttctgaacgaaaagagctccttc
aggcaagccatcagccacgctgatcgccttaagctactcccggtgcaccacagaaactcc
agcaaacgcaagcctagaccccaaatcactgccttgcaggaggagacggaggaagaagtg
caggagacgaggctgtga
DBGET
integrated database retrieval system
