Chroicocephalus ridibundus (black-headed gull): 134510219
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Entry
134510219 CDS
T10910
Symbol
LSM8
Name
(RefSeq) LSM8 homolog, U6 small nuclear RNA associated
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03018
RNA degradation
crid03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134510219 (LSM8)
09123 Folding, sorting and degradation
03018 RNA degradation
134510219 (LSM8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crid03019
]
134510219 (LSM8)
03041 Spliceosome [BR:
crid03041
]
134510219 (LSM8)
Messenger RNA biogenesis [BR:
crid03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
134510219 (LSM8)
mRNA degradation factors
5'-3' decay
Lsm complex
134510219 (LSM8)
Spliceosome [BR:
crid03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
134510219 (LSM8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RimP_C
Motif
Other DBs
NCBI-GeneID:
134510219
NCBI-ProteinID:
XP_063179313
LinkDB
All DBs
Position
1
Genome browser
AA seq
96 aa
AA seq
DB search
MTSALENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY
IVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVVH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacctcggctttggagaattacatcaaccgtactgttgcagtaattacttctgatgga
agaatgattgtgggaaccctcaaaggttttgatcaaaccattaacttgattttggatgaa
agccacgaacgagtgttcagttcttcacaaggagttgagcaagtagtgctgggattatac
attgtaagaggtgataacgttgctgtcattggtgaaattgatgaagagacagattcagct
cttgacttggggaacattcgagcagaacctttaaactcagttgtgcattga
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