Chroicocephalus ridibundus (black-headed gull): 134510294
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Entry
134510294 CDS
T10910
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04510
Focal adhesion
crid04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134510294 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134510294 (LAMB1)
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
ATG17_like
LAMB1
OVT1
F5_F8_type_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
134510294
NCBI-ProteinID:
XP_063179483
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Position
1:204474358..204521209
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AA seq
1785 aa
AA seq
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MGRLPLYLCCCLALWSAAAQEPEYSYGCAEGSCYPATGDLLIGRAARLSASSTCGLRQPE
PYCIVSHLQEDKKCFICDSENPFHDTLNPDSHRIENVVTTFAPNRLKLWWQSENGLENVT
IQLNLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKTWQVYRYFAYDCESSFPGISTGPM
KKVDDIICDSRYSDIEPSTEGEVIYRVLDPAFRIEDPYSPRIQNLLKITNLRVKFIKLHT
LGDNLLDSRMEIREKYYYAIYDMVVRGNCFCYGHASECAPVDGFNEEVEGMVHGHCMCRH
NTKGLNCEQCLDFYHDLPWRPAEGRNSNACKKCNCNGHSSQCHFDMAVYMTTGNTSGGVC
DDCQHNTVGRNCEQCKPFYFQHPERDLRDPDVCEPCNCDPAGSQNDGVCDRYTDFSTGLI
AGQCRCKLFVEGERCDLCKEGFYGLSADDPVGCQSCACNPLGTHPGGNPCDSKTGNCYCK
RLVTGKQCNQCLPEHWGLSNDMDGCRPCDCDQGGALNNNCSSESGQCECRPHMFGRQCNQ
VEPGYYFISLDHYIYEAEEASLGPGVNIIERQYTPDRTPSWTGIGFVRVPEGAYLEFYID
NIPYSMEYDILVRYEPQLPDQWEKAVISVSRPGKIPTGSRCGNTVPDDDNQVVSLSPGSR
YVVLPRPVCFEKGLNYTIRLELPQYSSVDTETESPYTLIDSLVLMPYCKSLDIFTVGGSG
EDVVTNSAWETFQRYRCLENSRSVVKTPMTDVCKNIIFSISALLHETALSCQCDPQGSLS
SVCDPSGGQCQCRPNVVGRQCDRCAPGTFGFGPSGCRPCECHVRGSYNAFCDAETGQCHC
FPGVYGRQCDRCLPGFWGFPSCQPCHCNGHADDCSPYTGECLSCRDHTAGHNCERCQAGY
YGDPVLGSGDHCRPCPCPDGPESGRQFASGCYQDPVTLQVVCVCSVGYIGSRCDECASGF
FGSPDEVGGACQPCQCNNNIDTTDPEACDKKTGMCMKCLYHTEGENCHLCKQGYYGSALQ
QDCRKCVCNYLGTVREDCEGSESCRCEAATGQCRCLPNVVGQTCDRCAPHTWRLAGGAGC
EQCDCHPMRALGPACNEFTGQCQCMPGFGGRTCRECQELFWGDPSVECRACDCNPHGIQT
PQCDRTTGQCICNEGVEGPRCDKCSRGYSGFFPDCVPCHQCFALWDVIISELSNRTQQFL
DRANALKITGVTGPYQQTLSTLEEKLSEIKTIIAQNPAAEPLKNIGNLFDEAEKLTADVT
VKIADIEENLSALAVKSNSTDADLSVLEADAKSLDRVVKELAEQLEFIKISDVRGALDSI
TKYFQMSLEAEERVNASTVHPDSAVELSAQTRQEVEDLINEKEAQFKAKQEEQSRLLDEL
AGKLQSLDLSEVAEKTCGTPAGASCAESECGGLNCRTDEGEKKCGGPGCDGLVTVAHNAW
QKAMDFDRDILSALAEVEQLSRMVSEAKQRADEAKQNAQAVLLKTNATKEQVDRSNEDLR
NLIKQIRDFLMQDSADLDSIEAVANEVLNMEMPSTPQQLQALTEDIRERVESLSDVEVIL
QQSAGDIARAEMLLEEAKKASKGATDVKVTADMVKAALEEAEKAQNAAEKAIKQADEDIK
GTQDLLTSIASENAASEETLNNATLRLFELERSVEDLKQKAATNSENVNNIEEKSTTAKQ
NAEEVKKVLNTELNDKYKTVEDRVAKTTEELADARRKASMLQDEAKALLAQANSKLQLLK
DLENTYENNQRVLEDKAKQLVELEETVRSLLQTISQKVAVYSTCL
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcctcccgctgtacctctgctgctgcctcgcgctgtggtccgcggcggcgcag
gaacccgagtacagctacggctgcgccgaggggagctgctacccggccaccggcgacctg
ctcatcggccgcgccgcccgcctctccgcctcctccacctgcggcctccgccagcccgag
ccctactgcatcgtcagccacctccaggaggacaaaaaatgtttcatatgtgactccgag
aatcccttccacgatactctcaatcctgacagtcaccgcattgaaaacgtcgtcaccacg
tttgctccaaatcgcctgaagctctggtggcagtcggaaaatggtttggaaaatgtgact
atccagctgaacctggaggctgagtttcatttcactcatctcattatgaccttcaagaca
ttccgtcctgctgcaatgttgatagaaagatcatctgattttggaaaaacgtggcaagta
tataggtattttgcatatgactgtgagagctcgtttcctgggatttcaactggacccatg
aagaaagtagatgatatcatttgtgattcccgatactccgacattgaaccttcaacggag
ggagaggtaatatatcgtgttttagatcctgcttttcgaattgaagatccgtacagtcca
aggattcaaaacctattaaagatcacgaatctgagagtcaaattcatcaagctgcacaca
ctgggagataatctcttggactctaggatggagatcagagagaagtactactatgccatc
tatgacatggtggttcgcgggaactgtttctgctatggacacgccagcgagtgtgcacca
gtggatggctttaacgaagaagtggaaggaatggtccatgggcactgcatgtgcagacat
aataccaaggggttaaactgtgaacagtgtttggatttctaccatgacttaccctggcga
cctgctgaaggccgcaatagtaacgcatgcaaaaagtgcaattgcaatggccactccagc
cagtgccactttgacatggctgtgtacatgacaacggggaacaccagtgggggagtgtgc
gacgactgccagcacaacaccgtaggacgcaactgcgagcagtgcaagcccttctacttc
cagcacccggagagggatctgcgggaccccgatgtctgtgagccttgcaactgtgaccca
gctggctcccaaaatgacggcgtctgcgatcgctacactgatttctccaccggcctcatt
gctggacaatgccgttgtaaattatttgtcgaaggggagcgttgtgacctctgcaaagaa
ggtttctatggcctgagtgccgatgacccagtgggttgtcagtcttgtgcgtgtaatcct
ctgggtacccaccccggggggaatccttgtgattcgaagacaggaaactgctattgtaag
cgcctggtgacaggaaagcagtgcaatcagtgcctgcctgagcactgggggctgagcaat
gacatggatggatgtcggccgtgcgactgcgaccagggaggagcgctgaacaacaactgc
tcaagtgaatctggccaatgcgagtgccggccccacatgtttggacgtcagtgtaaccag
gtggagcctggctattacttcatttcgctcgatcattacatctatgaggcggaggaagcc
agcttgggtcccggagtaaacataatagagcgccagtacacaccggaccgcacaccatca
tggacaggcataggatttgtaagggtccctgaaggggcgtacctggaattctacatcgac
aacatcccctactccatggagtatgatattctggtccgctacgagccacagttgccggat
cagtgggaaaaagctgtgatcagcgtctcacgcccaggcaagattcccacgggcagccgc
tgtggcaatacagttcctgatgatgataatcaggtcgtctcactgtcacccggctccaga
tacgtcgttctcccgcggcctgtctgcttcgagaagggtctgaattacaccatccgcctg
gagctgccccagtactcctcggtggatacggagacggagagcccatacacgctcattgac
tctcttgttctcatgccatactgcaaatcactggacatctttacagtgggaggctcaggt
gaagacgtagtcacgaacagtgcttgggaaactttccaaagataccggtgtctggaaaac
agcaggagtgtggtgaaaacccccatgacagatgtctgcaagaacatcatattcagcatt
tctgcgcttttacacgagaccgcattatcgtgccagtgtgacccccagggttccctgagt
tcggtgtgtgatcccagcggaggacagtgccagtgtcgtcccaacgttgttggaagacag
tgtgacagatgtgcccctggcacctttggattcgggccaagtggatgccgaccgtgtgag
tgccatgtccgaggctcttacaacgccttctgcgatgcagagacgggccagtgccactgc
ttccctggggtgtatgggcggcagtgcgaccgctgcctgcccggcttctggggcttcccc
agctgccagccctgccactgcaacggccacgccgacgactgcagcccctacaccggggag
tgcctgagctgccgggaccacacggcagggcacaactgcgagaggtgccaggctggctac
tacggagaccccgtcctgggatcaggtgaccactgccgcccctgcccttgccctgatggc
cctgagagtggacgccagtttgccagcggctgttaccaggatccggtcacgctgcaagtc
gtgtgtgtctgtagcgtgggatacataggcagtcgatgtgatgaatgtgcgtctggcttc
tttgggagccccgacgaggttggcggcgcctgccagccatgccagtgcaacaacaacatc
gacaccactgacccggaggcctgcgacaagaagacgggaatgtgcatgaagtgcctgtat
cacacggagggtgaaaactgccacctctgcaaacagggctactatgggagcgccctgcag
caggactgcagaaagtgcgtctgcaactacctgggcaccgtgcgggaggactgcgagggc
tcggagagctgccggtgcgaggcagccacggggcagtgccggtgcctccccaacgtggtg
gggcagacctgcgaccgctgcgccccacacacgtggcgtctggccggcggcgccggctgc
gagcagtgcgactgccaccccatgcgcgccctcgggcccgcctgcaacgagttcacgggg
cagtgccagtgcatgccgggattcggaggccggacctgccgggagtgccaggagctcttc
tggggcgacccaagcgtggagtgccgagcttgtgattgcaaccctcatggcatccagacc
ccgcaatgtgaccgcaccactgggcagtgtatctgcaatgaaggggtggaagggccgcgc
tgcgacaagtgctcccggggctactcaggcttcttccctgactgcgtgccatgccaccag
tgctttgccctctgggatgtgatcatcagtgagctgtctaataggacccagcagttcctg
gatagggctaatgccctcaaaatcactggagtcactggcccataccagcagacactcagc
accctggaggagaagctcagtgaaattaaaaccatcattgctcaaaacccagctgccgag
cccctgaagaacatcggaaatctctttgatgaagcagaaaagctgacagcagatgttaca
gttaagatagctgacatagaagaaaacctgtcagccttagccgtgaagagcaatagcaca
gacgctgacctgagcgtgctggaggcagatgccaaaagcctagaccgtgtcgtgaaagaa
ctcgcagaacagctagagttcatcaagatctctgatgttcggggagccttggatagtatc
accaagtatttccagatgtccctggaggcagaggagagggtcaatgcctccactgttcac
cccgatagcgctgtggagctgtcagcacaaacgcggcaggaagtagaagacttaatcaat
gagaaggaggcccagttcaaggctaaacaagaggagcagtcacgccttctggatgaactc
gcaggcaagctgcagagcctggacctctccgaagtggctgagaagacctgtggcactcct
gcgggagcttcttgtgccgagtctgagtgcggtggcttgaactgccgaacggatgaagga
gagaagaagtgcggaggacctggctgcgacgggctggtgaccgtagctcacaacgcctgg
cagaaagccatggattttgacagagacatcctcagtgcgttagcagaagttgagcaactc
tccagaatggtttctgaggcgaaacagagagctgatgaagcaaaacaaaatgcacaagca
gttctgctcaaaaccaatgctacaaaagaacaagtggacagaagcaacgaagatctgaga
aatcttattaagcagattagagacttcctaatgcaagacagcgctgacctggatagcatc
gaggcagtggctaacgaagtgctgaacatggagatgccaagcactccccagcagctgcaa
gccctgacagaagatattcgcgagcgtgtagaaagcctttctgatgtcgaggtcattctg
cagcagagcgccggagacattgccagagcagaaatgctactggaggaagctaaaaaagca
agcaaaggtgcaacagatgttaaagtcactgcagacatggtgaaagcagcactggaagaa
gctgaaaaagctcaaaatgcagctgaaaaagccatcaaacaagctgacgaagatattaaa
ggaactcaagacctgctgacctcaattgcatctgaaaatgcagcatctgaagaaacattg
aacaatgccaccttacgtctgtttgagctagagaggagcgttgaagaccttaagcaaaag
gctgctacaaattcagagaatgtgaacaatatagaagaaaaaagtactactgcaaaacaa
aatgctgaagaagtcaaaaaggtcctcaacaccgagctgaacgacaagtacaaaacggtg
gaagatcgcgtagccaagacgacagaagagttggctgatgctaggaggaaagccagcatg
ttgcaagatgaagctaaagccttgttggctcaagcaaacagcaaactccagctgctcaaa
gacttggaaaatacatatgaaaacaatcaaagagttctggaagataaagccaagcagttg
gtggagctggaagagacagttcgctccctcttacagacaatcagccagaaggttgctgtt
tatagcacttgcttataa
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