Chroicocephalus ridibundus (black-headed gull): 134510303
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Entry
134510303 CDS
T10910
Symbol
HBP1
Name
(RefSeq) HMG box-containing protein 1 isoform X1
KO
K21644
HMG box transcription factor 1
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crid03000
]
134510303 (HBP1)
Transcription factors [BR:
crid03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
134510303 (HBP1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AXH
HMG_box
HMG_box_2
HMG_WDHD1
MATalpha_HMGbox
Motif
Other DBs
NCBI-GeneID:
134510303
NCBI-ProteinID:
XP_063179498
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Position
1:complement(204867215..204886218)
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AA seq
530 aa
AA seq
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MATGLSDTLEHPNMVWEVKTNQMPNAVQKLLLVVDKRTSGMNESLELLKCNENLPSSPGY
ASCDEHMELDDLPELQAVQTDSTPPALFQLGADVSHQERSRPSWSQHTSNSNSESAYSCE
NGVNWLTELANIATSPQSPLMQCSFYNRSSPVHIIATSKSLHSYARPPPGSSKNDPNFSK
NDLDETPVRHERANSESESGIFCMSSLSDDDDLGWCHSWPPTVWHCFLKGSRLCFHKGRN
KEWQDVEDFARSEGCGKEENLPESPYKGYGSDGLKLISHEESISFGESVLKLTFDPGTVE
DGLLTVECRLDHPFYVKNKGWSSFYPSLTVVQHGIPCCEMHLGDLCLPPGHPDAINFDDS
GVFDTFKSYDFTPMDSSAVYVLSSMARQRRASLSCGGSNNQDAERSESSSKNCAPTASSH
LSSSSLYSKAGKSHSSGTASTVSATSPNKCKRPMNAFMLFAKKYRVEYTQMYPGKDNRAI
SVILGDRWKKMKNEERRMYTLEAKALAEEQKRLNPDCWKRKRTNSGSQQH
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgggtttgtcagatactttggagcatcctaacatggtgtgggaagtgaagaca
aatcaaatgcctaatgcagttcagaaactcctcctggtagtggacaagagaacttccggg
atgaatgagtcactggagttgctgaagtgtaatgaaaacctgccctcttctcctggatat
gcatcctgtgatgaacacatggaacttgatgatcttcctgagctacaggctgtgcagacg
gattctaccccacctgcacttttccagcttggtgccgatgtttcacatcaggaacgttca
aggccttcatggagccaacatacctcaaacagcaattcagaaagtgcttattcttgtgag
aatggggtgaactggttgacagaattagcaaatatagccacaagtcctcagagtcctctg
atgcagtgctctttttataacagatcatctcctgttcacataatagctacaagcaaaagt
ttacattcctatgcacgtcctccaccaggatcctcaaagaatgatcctaacttctccaag
aatgatttggatgaaacaccagtcagacatgaaagggcgaatagtgaatcagaatctggc
attttctgcatgtcatcactttcagatgatgatgatttaggatggtgccattcctggccc
ccaactgtttggcattgttttctaaaaggctctcgtttgtgctttcacaaaggacgcaat
aaagagtggcaggatgttgaagactttgcaagatctgaaggctgtggaaaagaggaaaat
ctcccagaaagtccttacaagggctatggttctgatggtttgaagttaatttctcatgaa
gaaagtatttcctttggtgagtcagtgctgaagttgacttttgatcctggcacagtggaa
gacggcttgcttacagtagaatgcagactcgatcatccattttatgttaaaaataaaggt
tggtcatctttttatccaagcttgactgtggtacagcatggcattccatgctgtgaaatg
catcttggagatctgtgtctacctcctggacaccctgatgccattaactttgatgattca
ggtgtttttgatacatttaaaagttacgattttacaccaatggattcctctgcagtttat
gtgctaagcagcatggctcgccagcgtcgcgcttctctgtcttgtggaggatcgaacaat
caagatgctgagagatcagaaagcagtagtaaaaactgtgcgcctactgcatcgtcacat
ctttcctccagttctttgtacagtaaagctggcaaaagccacagctcagggactgcaagt
actgtgagtgccacttctccaaacaagtgcaaaagaccaatgaatgccttcatgcttttt
gccaaaaaatacagagttgaatatactcagatgtatccagggaaagacaacagagccata
agtgtgatactcggcgacaggtggaagaaaatgaaaaatgaagaaagacggatgtacacg
ctagaagccaaggccttggcagaagaacagaaacgtttaaatcctgactgttggaagcga
aaaagaacaaattctggctcacaacagcattaa
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