Chroicocephalus ridibundus (black-headed gull): 134510375
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Entry
134510375 CDS
T10910
Symbol
OPTN
Name
(RefSeq) optineurin isoform X1
KO
K19946
optineurin
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04137
Mitophagy - animal
crid04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134510375 (OPTN)
04137 Mitophagy - animal
134510375 (OPTN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crid04131
]
134510375 (OPTN)
Membrane trafficking [BR:
crid04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
134510375 (OPTN)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
134510375 (OPTN)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
134510375 (OPTN)
Xenophagy
Cargo receptors
134510375 (OPTN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC2-LZ
NEMO
zf_C2H2_10
DUF6439
EDR4-like_1st
Motif
Other DBs
NCBI-GeneID:
134510375
NCBI-ProteinID:
XP_063179675
LinkDB
All DBs
Position
1:complement(213049755..213068643)
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AA seq
558 aa
AA seq
DB search
MSSKLKSRPAENGERARSKMENGTDSMAAPALSTYTPEEMVQQMKELITENNELKEAMKV
HNQAMKDRYEELSIWREKQKEEREFYELKFKEAKQCLLAKCIENEQLQQQLQSLKEREEG
AETEGGMAPEKEVRQLKSQVQRLQAEKADLLAIISELQVKLNISSAEDSFVEIGMSEEEI
SRTAKEHQEPSGEMTSNVAVYIRSKAVDDSKNLESEELTVSQLLCCLRNETQKREKLEKE
LQDHKERLSKLEKENSNCLESGTQTEQEEEEGSEAVGSEVETLNLQVCALFKELQEAHEK
LKEAELIQKKLQEKCQVLERKSLGAASELEEKQQLIYTIKKLELQVESMQAEVKLEQAKT
HEEKARCSSLQDAYSKLLSELTEATKTIDEMKLKELDRVDKVVVEQLNAKVELAEQALAA
KQLQIDEMKQIIAKQEEDLETMTVLRAQMEVYCSDFHAERAAREKIHEEKEQLAVQLAYL
LKEQQNLEDLGRNSLAEMQNRHGARAPDQERSPRLVQRGTGGQDWREQQNISMYSCPKCE
EILPDLDTLQIHVMDCIN
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaagttgaagagccgtcctgctgaaaatggagagcgtgccaggagtaaaatg
gaaaacggaacagacagcatggctgctcctgcccttagtacctacaccccagaagagatg
gtacaacagatgaaagaactgatcactgagaacaatgagttaaaagaagccatgaaggtg
cataaccaagctatgaaggaccgatacgaggaactttccatctggcgagagaagcagaaa
gaagagcgagaattctacgagctaaagtttaaggaggctaagcagtgcttgctagccaag
tgcattgaaaatgaacagctacagcaacaacttcagagcttaaaggaaagagaagaagga
gctgaaacggagggaggtatggctcctgagaaggaagtgaggcaactgaaatcccaggtg
cagcggctccaggctgagaaggcagatctgctagccatcatttcagaactgcaggtcaag
ctgaacatctcttcagcagaggattcctttgtggagatcgggatgagtgaagaagaaata
agtagaactgcaaaggaacatcaagagcctagtggtgaaatgaccagtaacgttgctgtc
tacatcaggagcaaagctgtagatgactcgaagaatttggagtctgaggagctaactgtg
agccagctgctctgctgccttagaaatgaaactcagaagagggaaaaactggagaaggag
ctgcaggatcacaaagagaggctgtcaaagctggagaaggaaaacagcaactgtctggag
agtggcacacaaactgaacaggaagaagaggaaggttcagaggctgttggcagtgaagta
gaaaccctgaatttgcaagtttgtgctctgtttaaagagcttcaggaagcccatgagaag
ttaaaagaagcagaattgattcagaagaagcttcaagaaaaatgccaagtactggaaaga
aaaagcttgggggctgcgtcagaattggaggagaagcagcagctaatatacaccatcaag
aagctggaacttcaggtggagagcatgcaggcagaggtcaagctggaacaagccaagaca
catgaagaaaaggcaagatgtagtagcctgcaggatgcgtatagcaaactcctttctgaa
ctcactgaggcaacgaaaacaatcgatgaaatgaaactcaaagagctggacagagtggat
aaagttgtggtggaacaactgaatgcaaaggtggagttggcagaacaagcccttgctgca
aagcagctccagatagatgaaatgaagcagattattgctaagcaagaggaggacctggaa
accatgactgtgctccgtgctcagatggaggtctattgttctgacttccatgctgagcgg
gcagcaagagagaagatccatgaggagaaggagcagttggctgtccagctggcatatctg
ctaaaagagcagcaaaaccttgaagatcttggccgaaattctttggcggagatgcagaat
cgccacggagccagggcaccagatcaggaacgctcacctcgccttgtccaaagaggaact
ggtggtcaagactggcgagagcagcagaatatctcaatgtattcatgtcccaaatgtgaa
gaaattctccctgatttggacacactgcagattcacgttatggactgcattaattga
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integrated database retrieval system
