Chroicocephalus ridibundus (black-headed gull): 134511169
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Entry
134511169 CDS
T10910
Symbol
VIM
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
134511169 (VIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crid03019
]
134511169 (VIM)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
crid04812
]
134511169 (VIM)
04147 Exosome [BR:
crid04147
]
134511169 (VIM)
Messenger RNA biogenesis [BR:
crid03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
134511169 (VIM)
Cytoskeleton proteins [BR:
crid04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
134511169 (VIM)
Exosome [BR:
crid04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134511169 (VIM)
Exosomal proteins of other cancer cells
134511169 (VIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
TolA_bind_tri
DUF7491
TPR_MLP1_2
RBD-FIP
Sec10_N
DUF4515
DUF1759
LAMB4
Motif
Other DBs
NCBI-GeneID:
134511169
NCBI-ProteinID:
XP_063180803
LinkDB
All DBs
Position
2:complement(23095421..23103896)
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AA seq
459 aa
AA seq
DB search
MSISTKNSSYRRMFGGGSRPSTGTRYITSSSRYSLGSSLRPSTARYVSASPGGMYATKTT
SVRLRSSMPPMRLHDSVDFSLADAINTEFKANRTNEKVELQELNDRFANYIDKVRFLEQQ
NKILLAELEQLKGKGTSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLADDIMRLRE
KLQEEMLQREEAENTLQSFRQDVDNASLARLDLERKVESLQEEIVFLKKLHDEEIRELQA
QLQEQHIQIDMDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSEAANRNND
ALRQAKQEANEYRRQIQSLTCEVDALKGSNESLERQMREMEENFALEAANYQDTIGRLQD
EIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRINMPIPTFASLNLRETN
IESQPMVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcagcaccaagaactcctcgtaccgccgcatgttcggcgggggcagccgcccc
agcaccggcacccgctacatcacctccagcagccggtactcgctgggcagctccctgcgg
cccagcaccgcccggtacgtgtccgcctcgcccggcggcatgtacgccaccaagacgacg
tcggtgcggctgcggagcagcatgccgcccatgcggctccacgactccgtggacttctcc
ctggccgacgccatcaacacggagttcaaggcgaaccgcaccaacgagaaggtggagctg
caggagctcaacgaccgcttcgccaactacatcgacaaggtgcggttcctggagcagcag
aacaagatcctgctggccgagctggagcagctcaagggcaagggcacgtcccgcctgggc
gacctctacgaggaggagatgcgggagctgcgccggcaggtggaccagctcaccaacgac
aaggcacgcgtggaagtggagcgggacaacctcgccgacgacatcatgcgtctgagggag
aagttgcaagaggagatgctgcagcgggaggaggccgagaacaccctgcagtccttcaga
caggatgttgacaatgcctctctggcacgtcttgatcttgagcgcaaagttgagtccctg
caagaggagattgtcttcttgaagaagcttcatgatgaggaaatccgggaacttcaggcc
caactccaggaacagcacatccaaattgatatggatgtttctaagcctgatcttactgct
gccctgcgtgatgttcgccaacagtatgaaagcgttgctgctaaaaatcttcaggaagct
gaagagtggtacaagtccaaatttgcagatctctccgaagctgctaataggaacaacgat
gccctgcgccaggccaaacaagaagctaatgaataccgcagacagattcagtctctcacc
tgcgaagttgatgccctcaagggaagcaatgaatccctggagcgccaaatgcgtgaaatg
gaggagaattttgctcttgaagctgctaactaccaagacactattggccgtctgcaggat
gagattcagaacatgaaggaagaaatggctcgccatctccgcgagtaccaggacctgctg
aatgtaaagatggctcttgatattgagattgccacctacagaaaactgctggagggtgaa
gagagcaggattaacatgcctattccaacctttgcttctttgaacctgagagaaaccaac
attgagtctcagccaatggttgacactcactcaaagaggacacttctaattaagactgtt
gaaactagagatggacaggttattaatgaaacttcccagcatcacgatgacttggagtaa
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