Chroicocephalus ridibundus (black-headed gull): 134511221
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Entry
134511221 CDS
T10910
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crid04131
]
134511221 (VPS50)
Membrane trafficking [BR:
crid04131
]
Protein recycling
Others
EARP complex
134511221 (VPS50)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
134511221
NCBI-ProteinID:
XP_063180913
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Position
2:26668715..26758514
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AA seq
986 aa
AA seq
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MQKIKSLMTRQGLRSPQESVHDLSPIESFRIPSKEDLRELREEPTDPQAQQEIINSIEEV
YFSNDSFDIVKYELERLPPVLSLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVQELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQTSLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDISHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMQWHENHDQDEEAAVSSV
SDGSNVIGTEENSFDRSYVKKKLEHGLSRIWQDVQLKVKTYLLGTDLSNFKYDDFIFVLD
VISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKTYHRTRLEELRMFLENETWELCPVKSS
FSILQLHEFKFMEQSRSPSVSPSKQPASAISTAVTLFEQYCNGGNPFEIQADSKDDETED
VLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLRSRKRSDY
NLNKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRN
DTLILSSSLSTSNREQHSARQFESTGLGLSSSRLRTTLNRIQESLIDLEVSADPTGTLTA
AEERKEKVPSPHLSHLVVLTSGNSLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAAK
KPFLQQFYSQTVSTASELRKPVYWIVAAKAIDYEQMLLLMTNVKWDVKEIMSQHNIYVDA
LLKEFEEYNRRLNEVSKRVRIPLPVSNILWEHCIRLANRTLVEGYANVKKCSNEGRALMQ
LDFQQFLMKLEKLTDIRPIPDKEFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNV
CLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtcgctgatgacccgccagggtctaagaagtcctcaggagagtgtt
catgacctcagtcctattgaaagctttcggattcctagtaaggaggacctcagagaacta
cgtgaagaaccaactgatcctcaagctcagcaagaaataattaacagcattgaagaagtt
tatttttccaatgattcctttgatattgtgaagtatgagttagagaggcttcctccagta
cttagtcttcaagaactggaagagtacagagacaaattaaaacaacagcaagctgctgta
tctaaaaaagttgcagacttaattcttgagaaacagcctgcatatgttcaggaacttgaa
cgtgttacatcattgcagactggccttcagttagcagctgttatttgcacaaatggaaga
agacacctgaatatagcaaaggaaggcttcacgcaaactagtttggggcttcttgcgaac
caaaggaaacgacagttgcttattggactgctgaagtctctgagaacaataaaaacactg
caaagaactgatgtgcgtttgagtgagatgttggaggaagaagactatccaggagctatt
cagctgtgtttggaatgccagaaagctgccagcactttcaagcattacagttgtataagt
gaattgaattcaaaactgcaagacaccttggaacaaatagaggagcaattggacgtagca
ctctccaaaatatgtaagaactttgatatcagtcattacacaaaggttcagcaggcttac
aggctgcttggaaaaacacagacagcaatggaccagttacatatgcacttcactcaggcc
attcacaacactgtgtttcaagtagtccttggatacgtggagctgtgtgcaggaaacaca
gacaccaaatttcagaagttacagtacaaagacctctgtacacatattacttcagacagc
tacattccatgccttgctgatctctgcaaagccctctgggaagtcatgctcagttactac
cgaacgatgcagtggcatgagaatcatgaccaagatgaggaagcagctgtgtcttctgtt
tcagatggcagcaatgtgattggaactgaagagaacagttttgaccgcagctatgtgaaa
aaaaaattggaacatgggctttcacgaatatggcaggatgttcaactgaaagtgaaaaca
tatcttctgggaacagatctgtctaacttcaaatacgatgacttcatatttgtacttgat
gttatcagcaggcttatgcaagttggagaagaattttgtggcagtaagtctgaagttttg
caagaatctatcagaaaacagagtgttaactatttcaaaacgtaccacagaacccgtctt
gaagaattaagaatgtttttggagaatgagacttgggaactttgtcctgttaaatcaagc
tttagtattctgcagcttcatgaatttaagttcatggagcagtcacgttccccgtctgtg
tcacctagtaagcagcctgcttcagcaatttccacagcagtaaccttatttgagcagtac
tgtaacggaggaaacccatttgaaattcaggctgacagcaaagatgatgagacagaagat
gtgttagcttccaatgggtatgaatcagacgagcaagaaaaaagcgcatatcaagagtat
gatagtgacagtgatgttcccgaagagttgaaaagggattatgtggatgagcagacggga
gatgcccctgtgaaaagtgtttctcgagaaactctgaggagcagaaagagatcagattat
aacctcaataaagtgaatgcacctatcctaacaaacactacactgaatgtaataaggctt
gttgggaaatatatgcagatgatgaatattctgaaaccaattgcatttgatgtgatccac
ttcatgtcccagctcttcgattactatctgtatgcagtctatacattttttggccgaaat
gacacgctcatactgagttcatcactctctacttctaacagagaacagcacagtgctagg
cagtttgaatcaacaggactaggcctcagtagcagcagattacgcaccacactgaacaga
atccaggagagtctgattgatctggaggtatctgctgatcccacaggaactctcacagct
gctgaagagagaaaggagaaggtgccgagcccacatctcagtcatctcgtagttttgaca
tctggcaattcgctatacggtttggcagagagagtggtagccacagaatccttggtattt
ctggcagagcagtttgagtttcttcagcctcatcttgatgcagtgatgccagctgccaag
aagccttttcttcagcagttctattctcagacagtatcaactgccagtgaactacgtaaa
ccagtttattggattgttgctgctaaagccattgattatgaacaaatgctgcttctcatg
actaatgtgaaatgggatgtgaaggaaatcatgtcacaacacaatatatatgtcgacgct
cttttaaaggaatttgaagaatataacagaaggttgaacgaagtgtccaagagagtccgt
attccactgccagtctccaacatcctttgggagcactgcatacgcttggccaatagaact
ctcgtggaaggttatgccaatgtaaagaagtgcagcaatgaaggacgtgccttgatgcaa
ctggactttcaacaattcttaatgaaactagaaaagttaacagacattaggcctatccca
gataaagaatttgtggagacctacattaaagcatactacctaacagagaatgacatggaa
cgctggataaaagaacatagggaatattccactaagcagttgaccaatctggtgaatgtt
tgtctgggctcccacatcaacaaaaaggcaagacagaagctgctagctgctattgacgac
atagacaggcctaaaagataa
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