Chroicocephalus ridibundus (black-headed gull): 134511397
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Entry
134511397 CDS
T10910
Symbol
NOD1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04621
NOD-like receptor signaling pathway
crid05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
134511397 (NOD1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
134511397 (NOD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
crid04054
]
134511397 (NOD1)
Pattern recognition receptors [BR:
crid04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
134511397 (NOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
LRR_6
CARD
NOD2_WH
LRR_4
AAA_16
AAA_22
FumaraseC_C
Motif
Other DBs
NCBI-GeneID:
134511397
NCBI-ProteinID:
XP_063181333
LinkDB
All DBs
Position
2:46763359..46794009
Genome browser
AA seq
951 aa
AA seq
DB search
MEGQLYGNVEISVGKPPGASPPSFVALLKVYRELLVSRIRNTQCLIDNLIKNDYFSTEDA
EIVVQFATQADKVRKILDLVQSKGEEVSEYFIRVLQKVTDAYYELQPWLDEIGYEPSENI
CSKPVVNTDPVSRYCQKLRHELGRDSKFVMSYAQREEMLLEEIYSNSIMELVSFTNESLG
KVSQLEALFDDAVGLINEDGETVYVFGDAGIGKSILLQKIQSLWARKELDIGAKFFFRFR
CRMFSCFKEDEAICLKDLLFKYNCYPDQDPTEVFHHILQFPHTVLFTFDGFDEIYSNFDL
SSVPEICSPNEPTHPLVLLVSLLRGKLLKGSEKILTARTGTEIQRNIVRKKVLLRGFSSN
NLKEYTAMFFKDEGQRTLVLNQLEANPNLCSLCSVPLFCWIIFKCYEHFHSMSDSHELPD
CSVTLTDVFLLMIEVHLNRSLKTSLLKNNTRSQAEMFKSRKETLLALGKMAYKGMGNSFF
IFEQEEVSSANISEEDLQLGFLRTVKGYSGCDDQSTYEFLHLTLQSFFTALFLVIEEKVG
AKELLQFFNECSSTETAQPTCLRIPWLKKQLAREDPFRNNEHFHFTNLFLCGLLSRSKQK
LFRHLVLPAVIKKKRKTLITYLGESMKSHLKGLTRSRLQTYNQIQVQPNFVWMLRCLYET
QSEKVGKLAAKRMHANYIKLTYCNACSADCSAISFVVHHFQKRLALDLDNNNINDYGINQ
LLPCFSKLAVIRLSVNQVTDHGVRILYEELSKYQIVTFLGLYNNQITDVGAKYVAKLIEE
CSSLEYVKIGANKITSEGGKCLARAIQKSKTMFEIGMWGNQVGDEGAKAFAEALRNHPRL
TNVSLAFNGITTEGGKSIAEAMQHNDSVKIFWLTKNELDDEAAMSFAEMLKVNKKLVHLW
LIQNQITAKGVKYLSEALKENTAIKEVCLNGNLISQEEAKAFENEERIICF
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggaaggccaactttatggtaacgtggagatttctgtgggaaaacctccaggagcaagt
cctccatcctttgttgctctgctgaaggtataccgagaacttctggtcagtagaatccga
aacacgcagtgtttgattgacaacttgattaagaatgactacttctccactgaagatgca
gagattgttgtccaatttgcaactcaagcagataaggttcgcaaaattctagacttggtt
cagagcaagggagaagaagtctcagaatatttcatccgtgtcctacagaaagtcactgat
gcttactatgaacttcagccttggctggatgaaataggttacgagccttcagagaatatt
tgtagtaaacctgtggtaaatacagatccggttagcaggtattgccagaaactcagacat
gaactgggacgggactccaagtttgttatgtcctacgctcaaagggaagagatgctgctt
gaagaaatctactctaatagtattatggagctggtcagttttaccaatgagagcctaggc
aaagtgtctcaattagaagccctttttgatgatgcagttgggctaattaatgaagatgga
gagactgtttatgtcttcggtgatgcgggaattggaaaatccatcttgctgcagaagata
caaagtctttgggccagaaaagaattggacataggggccaaatttttcttccgtttccga
tgtaggatgtttagttgctttaaggaagatgaagccatatgtttgaaagacttactcttc
aaatataattgctacccagaccaggaccccacagaggtgtttcatcacatcttgcaattc
cctcatacagttcttttcacatttgatggcttcgatgagatctattccaactttgatctc
agtagtgttcctgagatatgttcacccaatgaacccacccacccactggtgctgctggta
agccttctcagaggaaagcttcttaagggatccgagaaaattcttacagcaaggacagga
actgagatccaaagaaacatcgttagaaagaaagtgttactccgtggtttctccagcaat
aatctgaaggaatacactgccatgtttttcaaagatgaggggcaacgaacactggtattg
aaccagttggaagccaaccccaatctctgcagtttatgttcagtgcctttattttgttgg
attatctttaaatgctatgaacacttccattccatgtcggacagccacgagcttccagac
tgttctgttacattgacagatgtgtttttgctcatgattgaagtccatctgaaccgatct
ctgaaaacaagtttgctgaagaacaacaccagaagccaagcagagatgttcaaatcaaga
aaggaaactcttctagccttgggtaaaatggcatacaaaggcatggggaactctttcttt
atcttcgagcaggaggaggtctcatcagcaaacatctctgaagaagatttgcaattgggc
tttctcaggacagttaaaggttatagtggctgtgacgatcagtccacttacgagttcttg
cacttaacccttcagtcttttttcacagctttgttcctggttattgaagagaaagtgggt
gccaaggagttacttcagtttttcaatgaatgctcttccactgagactgcccagcctact
tgccttcgtattccttggttgaagaaacaactagcaagggaggatcctttccgaaataat
gaacactttcattttaccaacctgtttctttgtggcctgctttctagatccaagcagaag
cttttcagacatttagttctgcctgctgtcattaagaagaaaagaaagacgctcatcaca
taccttggggagagcatgaaatcccacctgaaaggcctcactcggtccagacttcaaacc
tacaatcagatccaggtccagcccaattttgtttggatgctgaggtgcctttacgagacc
cagagtgagaaagtggggaagttggctgccaaacgcatgcacgccaattacatcaagctc
acatactgcaatgcctgctctgctgactgcagtgctatttccttcgttgtgcatcacttt
caaaagcgcctggctctggatttggacaacaataatatcaatgattacggaataaaccag
ctgctaccttgtttcagcaagcttgcagtgatcaggctcagtgtaaatcaggtcacagat
cacggtgtaaggatcttgtatgaagaactctcgaagtaccaaattgtgactttcttgggc
ttatacaacaatcagatcactgatgtcggagccaaatatgttgcaaaactaattgaagag
tgttcgagccttgaatacgttaaaataggagcaaacaaaataacgagcgaaggagggaag
tgccttgcccgggccatccagaagagcaagacaatgtttgaaattgggatgtggggtaat
caagttggagacgaaggagcaaaggcatttgcagaggccctgaggaaccaccccaggtta
actaatgtgagtcttgcattcaatggcatcacgacagagggaggcaaaagtattgctgaa
gctatgcaacacaacgactctgtgaaaatattctggttgactaaaaatgagctggatgat
gaggcagcaatgagttttgcagagatgctgaaggtcaacaagaaactggtgcatttatgg
cttatccagaatcaaattacagccaaaggggtgaagtacctcagcgaagctctcaaggag
aacacagctattaaagaagtctgtctgaacgggaacctgataagccaagaagaggccaaa
gcttttgaaaatgaagagcggatcatttgcttttga
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