Chroicocephalus ridibundus (black-headed gull): 134511477
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Entry
134511477 CDS
T10910
Symbol
MLH1
Name
(RefSeq) DNA mismatch repair protein Mlh1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03430
Mismatch repair
crid03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
134511477 (MLH1)
03460 Fanconi anemia pathway
134511477 (MLH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crid03400
]
134511477 (MLH1)
DNA repair and recombination proteins [BR:
crid03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
134511477 (MLH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Hfx_Cass5
Motif
Other DBs
NCBI-GeneID:
134511477
NCBI-ProteinID:
XP_063181556
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Position
2:52104606..52122474
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AA seq
749 aa
AA seq
DB search
MAGVIRRLDEAVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQVQD
NGCGIRKEDLDIVCERFTTSKLQKFEDLASISTYGFRGEALASISHVAHVTVTTKTADAK
CAYRATYSDGKIKAPPKPCAGNQGTQITVEDLFYNVNTRRKALKNPNEEYAKILEVVSRY
AIHNSGISFSVKKQGDTVSDVRTLSNASTVDNIRSIFGNAVSRELIEVDCEDASLAFNLK
GYITNANYSVKKCIFLLFINHRLVESAALRKAIETVYAAYLPKSTHPFLYLSLEIAPQNV
DVNVHPTKHEVHFLHEDSILERVQQHVESKLLGSNSSRMYFTQTLLPGADCSSSEVVKSA
GNSSAVTKGTGDKVYAHQMVRTDSREQKLDAFLQPVNNPLSTGPTEGTMEVNAGPPEGAV
RPQDAEMEDISDIVEMADVQEDTAMPGGLNDSGRLSPETVPPRKRPREDTDVEMEKDDTR
KDMTAACTPRRRIINLTSVLTLQEEISNQAHASLQEMLHDHSFVGCVSPQWALAQYQTKL
YLLNTTKLSQELFYQILIYDFANFGVLRLSEPAPLYELSMLALEDPESGWTEEDGPKEGL
AEYIVEFLKKKTEMLKDYFSLEIDEEGNLIGLPLLIDNYVPPLEGLPMFILRLATEVNWD
EEKECFESLSKELAMFYSIRKQYIIDEANQTNSQNEDSDSGSTTWKWTVEHVLYKAFRTH
LLPPKHFTEDGNILQLANLPDLYKVFERC
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgtgatccggcgtctggatgaagccgtggtgaaccgcatcgcggccggcgag
gtgatccagaggccggccaacgccatcaaggagatgatcgagaactgcttggatgcaaaa
tctacgagtatccaggtggtagttaaagaaggtgggctgaaactcatccaggtccaagat
aacggctgtggtatcagaaaagaagatctggacattgtatgtgagagatttactacgagt
aaactgcaaaaatttgaagatttggctagtatttctacatacggttttaggggtgaggca
ctggctagcatcagtcatgttgcccatgttacggtaacaactaaaacagctgatgcaaag
tgtgcatacagagctacttacagtgatggaaaaattaaagcccctccaaaaccctgtgct
ggaaatcaaggaactcagatcacggttgaagatctcttttacaatgtaaatacaaggagg
aaagctttaaaaaatccaaatgaagaatatgccaaaatactagaagttgttagcaggtat
gccatccataactcgggcatcagcttttcggttaaaaagcaaggtgatactgtatcagat
gtcagaaccttatcaaacgcctcaacagtggacaacattaggtccatctttggaaatgct
gttagcagggaactgatagaagtggactgtgaagatgcaagtctggcctttaatctgaaa
ggctacatcacaaatgcaaactactccgtgaagaaatgtatatttttactcttcataaac
catcgattggtagagtcagccgctttgcggaaagccatagaaactgtgtatgctgcttat
ttgcccaaaagtacgcatccattcctatacttaagcctggaaatagccccccagaatgta
gatgtgaatgtgcaccctacaaaacatgaggtccatttccttcatgaagatagtattcta
gagcgtgtgcaacaacatgtcgagagcaaattattgggctctaattcttcaaggatgtac
ttcactcagacgttgcttccaggggctgactgctcttccagcgaggttgtaaaatccgca
ggaaactcctctgcggttaccaaaggaactggtgataaagtttatgcccatcagatggtc
cgcactgattcccgagagcagaaattggatgcttttcttcagccagtgaacaaccccttg
agtacaggccccaccgaagggacgatggaggttaatgcaggacctccggagggtgcggtc
aggccgcaggatgctgaaatggaagacatcagtgatatagttgaaatggctgatgttcag
gaggacacggcaatgcctggggggctgaatgacagtggacgcttgtctcctgagacagtg
cctcctcgaaagagaccacgggaagacacggacgtagaaatggagaaagatgacaccaga
aaggacatgactgctgcctgcacccctagaagaagaattatcaacttgaccagtgtgttg
actctccaggaggaaatcagtaaccaggcacatgcaagtcttcaggagatgctacacgat
cactcatttgttggctgtgtcagtcctcagtgggccctggcccagtatcagacaaaactg
tatcttctcaatacaacaaaactcagccaagaactcttctaccagatacttatttatgac
tttgcaaactttggagtcttaaggttgtctgagccagctcctttatatgagctttcaatg
cttgctttagaggatcctgaaagcggctggacagaagaagacggcccaaaagaagggctt
gctgagtacattgtggagtttctgaaaaagaagactgaaatgctgaaagattatttttct
cttgaaattgatgaggaaggaaacctcattgggttaccgctgctgatagacaactacgtt
ccgccgctggaaggactgcctatgtttatccttcgcttggccacagaggtaaactgggat
gaagagaaggagtgttttgaaagcctaagtaaagaactagctatgttctactccattaga
aagcaatatataatagatgaagccaaccagacaaactctcagaacgaagactctgactct
ggttcaacaacatggaaatggactgtggaacatgtgctttacaaagcttttaggactcat
cttttacctcctaaacacttcacagaagatggcaacattttgcagcttgctaacctgcct
gacctctataaagtttttgagagatgctga
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