Chroicocephalus ridibundus (black-headed gull): 134511575
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Entry
134511575 CDS
T10910
Symbol
CTDP1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase isoform X1
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
crid01009
]
134511575 (CTDP1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crid03021
]
134511575 (CTDP1)
Enzymes [BR:
crid01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
134511575 (CTDP1)
Protein phosphatases and associated proteins [BR:
crid01009
]
HAD phosphatases
Fcp/Scp phosphatases
134511575 (CTDP1)
Transcription machinery [BR:
crid03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
134511575 (CTDP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
BSH_Fcp1
NIF
PTCB-BRCT
BRCT
RTT107_BRCT_5
LIG3_BRCT
BSH_CusB
Motif
Other DBs
NCBI-GeneID:
134511575
NCBI-ProteinID:
XP_063181841
LinkDB
All DBs
Position
2:65234155..65347125
Genome browser
AA seq
1000 aa
AA seq
DB search
MEGPAERGGGPGAEGPAGLITEIRAPGPRPLRLLEWKVSVGTAVQIGSVLALCAPLPPVP
RPTAGPSAPPPAASGASTRPQRAGPERKLKAERPGVVRELCARPGQVIAPGGVLVRLEGC
SHPVVMKGLCAECGQDLTQIRSKNGKQNVPLSTATVSMVHSVPELKVSSEQAEQLGREDQ
QRLHRNRKLVLMVDLDQTLIHTTEQHCQQMSNKGIFHFQLGRGEPMLHTRLRPHCKEFLE
KIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRDLFPCG
DSMVCIIDDREDVWKFAPNLITVKKYVYFQGIGDINAPPGSREIQMKKKVNHSTKPEALV
SAVTSVKDAEEIRNVTCVEEQSNGLKKATKDTCTANGSTSVSSETPDWDMKSRDKVNAQD
SLNDSTDNKKDSEVTYDLTNRKESQTFSEQVDKTGIEKQETQDKTTNDLDFELSSDSESD
GGLDTKKSSTSVSDSENEEKRSWKKSTQPLQDENLQKESCTDVSEKKDGLLNHSGDMQSL
PSENIHDKTDLEAQEESEQESLCDLGNGCADKKEAETESQNSEQSGITMGESLDQSMEEE
EEEDDTDDDDHLIYLEEILVRVHTDYYTKYDKYLKKEIEEIPDIRKIVPELKSKVLADVT
IIFSGLYPTNFPIEKTREHYHATALGAKIVKNLVLSADDPDKATHLIAARTGTEKVRQAQ
DCKDLHVVNPDWLWSCLERWDKVEEQLFPLKDDYIKTHRENSPATFPDTHNTFQTALFHP
TPIHPKSQPGPEVRLYDPNTGKLIRKGAQTSGQSMYIQSPAPPITLPVHGEHSSFRVVQP
HQQQMFEEDDLPAGENDEQPGPSKRKRQPSMSETMPLYTLCKEDLESMDKEVDDILGEGS
DESDSEKKKPEEDGEKPLISATGTLGMKTEQRPGSSSSSSSSSSERSLTGSVPRGHKRKL
DEDDAASESSKESSNEDEEGSSSEADEMAAALEAELNDFM
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atggaggggccggcggagaggggcggcgggcccggcgcggagggcccggcggggttgatc
acggagatccgggcgccgggcccgcggccgctgcggctgctggagtggaaggtgtcggtg
gggacggcggtgcagatcgggtcggtgctggcgctgtgcgccccgctgccgccggtcccg
cgccccaccgctggcccctctgccccgccgcccgccgccagcggcgccagcacccggccg
cagcgggccggccccgagcgcaagctgaaagcggagcggcccggcgtggtgcgggagctg
tgtgcgcggcccggacaggtcatcgcgcccgggggtgtcttggtgagactggaaggatgc
agccatcctgttgttatgaaaggcttgtgtgcagaatgtggccaggacttgactcagata
cgaagcaagaatggaaagcagaatgtgccattatccacggcaactgtgtctatggttcac
agtgtcccagaactgaaagttagttctgagcaagctgagcagctaggaagagaagaccaa
cagcgactacatcgaaatcgaaaactggtgctgatggtagatttggaccagacattgatc
catactacagaacagcactgccaacaaatgtctaataagggaatatttcatttccagtta
ggtcgaggtgagcctatgttgcatactcgtttgcgtcctcattgtaaggaattcctggaa
aaaattgccaagctgtatgaattacatgtttttacttttggcagcagactgtatgcacat
acaattgcaggatttttggaccctgaaaagaagcttttttcccatcggatattgtcaagg
gatgaatgtattgatccattttctaaaactgggaatcttagagatctcttcccatgtggg
gattccatggtttgcatcattgatgatagagaggatgtttggaagtttgcacccaatttg
ataactgtgaagaaatatgtatactttcaggggataggagatattaatgcacctcctgga
tcaagagaaattcaaatgaagaagaaagtaaaccactctacaaaaccagaggcacttgtt
tcagcagtgacatcagtaaaggatgctgaagaaatacggaatgttacatgtgtagaagaa
caaagcaatggtctcaagaaagctacaaaggacacttgcactgcaaatggaagtacttct
gtaagcagtgaaacacctgactgggatatgaagtctcgtgataaagttaatgcccaggac
tccttaaatgatagcactgataacaaaaaggacagtgaggtaacttacgatttgacaaat
agaaaagaatctcagactttttcagaacaagttgataaaacggggatagagaagcaggaa
acccaggacaagacaacaaatgacttggactttgaactgtctagtgacagtgaaagtgat
ggtggattggataccaaaaagtcatccacttctgtatcagatagtgagaatgaggaaaag
agaagctggaagaaatccacgcaacctctgcaggatgagaatttgcagaaagagagttgt
actgatgtcagtgaaaaaaaggatggtctgctgaatcattctggggacatgcaatctcta
cctagtgaaaatattcatgacaaaactgatcttgaagcacaagaagaaagtgaacaggaa
agcctttgtgatttaggaaacgggtgtgcagacaagaaagaagctgaaacagagtctcag
aatagtgaacagtctggaattacaatgggtgaatccttggaccagagtatggaggaagaa
gaggaggaggatgatacagatgatgacgaccatttaatataccttgaagagatccttgtg
cgggttcacactgattattacacaaagtatgataaatatctgaaaaaagagattgaggaa
attccagacatcagaaaaatagtaccagaactaaaaagtaaagtgttggcagatgtaacc
ataatatttagtggactctacccaacaaacttccccattgagaaaacacgggaacactat
catgccacagcacttggagctaaaattgtgaagaatctggtgctgagtgctgatgatcct
gacaaagcaacacatctcattgcagcaaggacaggcacagaaaaagtacggcaagctcag
gactgcaaggacctccatgttgtaaaccctgattggctgtggagctgcctggagcgctgg
gataaggttgaggaacagctctttcccttgaaggatgactacatcaaaacacacagagag
aatagccctgccacgtttcctgatacacacaacacatttcagacagctctttttcaccca
acacccatccatccaaagtctcagcctggtcctgaagttcgactttatgatcctaacact
ggaaagctaatcaggaaaggcgctcagacctctggccagtcgatgtacatccagtctcca
gctcctcccatcaccttaccagtccacggcgaacactcgtccttcagagttgttcaacca
catcagcagcagatgtttgaagaagacgacttaccagcgggtgaaaatgatgagcagcct
ggtccatctaagcggaaacgccagcccagtatgtctgagacaatgcccctgtacacccta
tgtaaagaggatttagaaagtatggataaagaggtggatgacatcttaggagaaggcagt
gatgaaagtgatagtgaaaaaaaaaagccagaagaggatggtgaaaaacctctgattagt
gcaacagggactctaggaatgaaaacagagcagagacccggatcctcatcatcgtcatca
tcatcttcaagtgaaagaagcttaacaggcagtgtgcccaggggtcacaagcgcaagctg
gatgaagatgatgctgccagtgaatccagtaaagaatctagcaatgaagatgaggaagga
agcagttctgaagcggatgaaatggcagcagcacttgaagctgaattgaacgacttcatg
tga
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