Chroicocephalus ridibundus (black-headed gull): 134511599
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Entry
134511599 CDS
T10910
Symbol
KDM1B
Name
(RefSeq) lysine-specific histone demethylase 2 isoform X1
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crid03036
]
134511599 (KDM1B)
Chromosome and associated proteins [BR:
crid03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
134511599 (KDM1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
zf-CW
Thi4
SWIRM
DAO
Pyr_redox_2
Pyr_redox
HI0933_like
FAD_binding_3
Pyr_redox_3
FAD_binding_2
Lycopene_cycl
FAD_oxidored
2-Hacid_dh_C
GIDA
NAD_binding_9
AlaDh_PNT_C
NAD_binding_7
KARI_N
ThiF
Atrophin-1
Shikimate_DH
zf-RING_2
YjeF_N
Attractin
Motif
Other DBs
NCBI-GeneID:
134511599
NCBI-ProteinID:
XP_063181892
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All DBs
Position
2:complement(71482687..71510598)
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AA seq
829 aa
AA seq
DB search
MLFCRSNNTMSTGRVRTKKKACSSDQSPDNLPLRSSGRQVKKKAAEAADDDDEASEKKYR
KCEKAGCTATCPVCFASAAERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYEKYT
AWKRIWTSNGKSEPSPKAFMADQQLPYWVQCTKPDCGKWRQLTKEIQLTPQIAKTYRCGM
KLNNSTKTEGSDQCSMPEDLRVAEVSDHWWYSMLILPPLLKDSVAAPFLAAYYPDCVGMS
PSCTSTNRLPGESNLVKLEHLKSVPNLTVAGMNKYFQPFYQPNECGKALCVRPDVMELDE
LYEFPEYSRDPTMYLALRNLILALWYTNCKEALTPQKCIHHIIVRGLVRIRCVREMERIL
YFMTRKGLINTGILSVSPDQYLLPKEYHNKSVIIVGAGAAGLAAARQLHNFGIKVIVLEA
KDRIGGRVWDDKTFKGVTVGRGAQIVNGCVNNPMALMCEQLGIKMHKLGEKCDLIQEGGR
ITDPTIDKRMDFHFNAILDVVSEWRKDKTQHHDVPLGEKIQEIYKAFIQESGIQFSELEE
KVLQFHLSNLEYACGSNLSQVSARSWDHNEFFAQFAGDHTLLTVGYSTVIDKLAEGLDIR
LNLPVQSIDYSGEEVQITTADGTVWTTQKVLVTVPLALLQKNAIQFNPPLSEKKIKAINS
LGAGVIEKIALQFPYRFWDSKIQGADFFGHVPPNSSQRGLFSVFYDMDPEGKQSILMSVV
TGDAVATIKNLDDKQVLQQCMTVLRELFKEQEVPEPVKFFVTRWSKDPWLQMAYSFVKTG
GSGEAYDIIAEDIQGKVFFAGEATNRHFPQTVTGAYLSGVREASKIAAY
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgttgttttgcagatctaataatacaatgtcaactggaagggtacgaacgaaaaaaaag
gcatgttcttcagaccagtctccagataaccttcctctgaggagttctggaagacaggtg
aagaagaaagcggctgaagcagcagatgatgatgatgaagcgtcagagaagaaatataga
aagtgtgaaaaagctggatgcactgcaacatgtcccgtttgctttgccagtgcagctgaa
agatgcgcaaaaaatgggtatacgtctagatggtatcatctttcctgtggggaacacttc
tgcaatgaatgttttgaccactattaccgaagccataaagatggttatgagaaatatact
gcctggaaaaggatttggacaagtaatggtaaaagtgagcccagtccaaaagccttcatg
gctgatcaacagcttccttactgggtgcagtgcacaaagccagactgtggtaaatggcgt
cagctgacaaaggaaatccagctgacaccacaaattgcaaaaacctacagatgtggtatg
aaactgaacaattccaccaagactgagggctcagaccagtgttccatgcctgaggacttg
agagtggctgaagtttcagaccattggtggtactccatgctcatactccctcctttgctg
aaagacagtgtggcagctccctttctagctgcatattatccagactgcgtgggcatgagt
ccatcctgtaccagcactaatcggttacctggtgaatccaaccttgtgaagttagagcac
ttaaagagcgtgcctaatttgactgttgcaggcatgaacaaatatttccagcctttttac
cagcccaatgaatgtgggaaagcactttgtgtgaggccagatgtcatggaactggatgag
ctctatgagttcccagaatattcacgagaccctaccatgtacttggctttgagaaacctg
attttggctctgtggtacacaaactgcaaggaggctcttacccctcaaaaatgtatccat
cacatcattgttcgggggcttgtgcgtatacggtgtgtacgggaaatggagaggatactt
tattttatgacaaggaaagggctaattaatacagggattttatcagtcagtcctgaccag
tatcttcttcctaaagaataccacaataaatctgtcattattgttggggctggtgcagca
ggattagcagcagcccgacaactgcacaactttggaattaaggtcattgtcttagaagct
aaagacagaattggtggccgagtgtgggatgataagacattcaaaggagtcactgttgga
agaggtgcacaaatcgtcaatggatgtgtcaacaacccaatggcactaatgtgtgagcaa
cttggcattaaaatgcacaaactaggggagaaatgtgacttgatccaggaaggtggaagg
ataacagatcccactattgataaacgtatggactttcatttcaatgccatcctagatgtc
gtctctgagtggagaaaagataagacccaacatcatgacgttcctcttggtgaaaaaata
caagagatctataaagcctttattcaggagtctggcatccagttcagtgagctggaagaa
aaagtactacagttccacctcagtaatttggagtatgcctgtggcagcaatctctctcag
gtgtctgcacgctcatgggaccacaatgagttttttgcccagtttgctggagatcacact
cttctaactgtgggatattctactgtgatcgataaattggcagaagggctggacatccgg
ctgaatttgccagtacagagtattgactattctggtgaagaagttcagatcactactgca
gatggaacagtatggacaacacaaaaggtattagtgactgtaccgctagcccttcttcag
aaaaatgccattcagtttaatcctccactgtcagaaaaaaaaattaaagccattaatagt
ttgggagcaggagtcattgagaaaattgccttgcagtttccttatagattttgggacagt
aaaattcaaggagctgatttttttggtcacgttccacccaattccagccaacgtgggctc
tttagtgttttctatgacatggatccagagggcaaacaaagcattttaatgtcagtggtc
actggagatgctgtagcaaccattaagaatttagatgataaacaagtactgcaacagtgt
atgactgtacttcgagagctgtttaaggagcaggaggttcctgaaccagtgaagtttttt
gttacccgatggagcaaagacccttggctccagatggcatatagttttgtaaaaacaggg
ggcagtggtgaagcttatgacattatagctgaagacatacaaggaaaagtttttttcgct
ggtgaagccacaaataggcactttcctcagaccgttacaggagcttacttgagtggggtt
cgagaagcaagcaaaatagcagcatattaa
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