Chroicocephalus ridibundus (black-headed gull): 134511600
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Entry
134511600 CDS
T10910
Symbol
NHLRC1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134511600 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crid04121
]
134511600 (NHLRC1)
Enzymes [BR:
crid01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134511600 (NHLRC1)
Ubiquitin system [BR:
crid04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134511600 (NHLRC1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_11
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
134511600
NCBI-ProteinID:
XP_063181894
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Position
2:71523149..71524821
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AA seq
397 aa
AA seq
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MAAGMAAAAAAKEGEEDEAELSLLECRVCFERYGPGGQRRPRNLPCGHVLCRGCLGALGG
PEGRRLECPFCRRACGPAETSDCLPLLQLLEVLGPAGGSLPSALGRGGGAAGPAPAGLGL
RLSLGGWGSLVNPTGVAACRRSGRLVVAHDGKKRIHVFGPSGSCLQRFGERGDAGNDIKY
PLDVTVTSDGHVVVTDGGDRSVKAFDFEGRGVLAVQEGFCLPWGLDATPESEVILTDSEA
GALYRLAADFQKGKLKKCQMIRSQLVSPRGVAVSQTSGAIVVIEHLKAQGPSNSSTRVKI
FSAEMDLVGQMDSFGLNLIFPSKIYTMAVAFDKEGRVVVTDVCSQAVICLGKPEEFPIFN
PLISHGLSYPVGLAYMANNSLAVLDSGDHSVKIYSST
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggggatggcggcggcggcggcggcgaaggagggggaggaggacgaggcggag
ctgagcctgctggagtgccgggtgtgcttcgagcggtacggccccggcgggcagcggcgg
ccgcggaacctgccctgcggccacgtcctctgccggggctgcctgggggccctgggcggc
cccgagggccggcggctggagtgtcccttctgccggcgggcctgcggcccggccgagacc
agcgactgcctgccgctgctgcagctgctggaggtgctgggccccgccggcggcagcctt
ccctcggccttggggaggggcggaggggcggccgggccggcccccgccggcctggggctc
cggctgtccctggggggttgggggtcgctggtcaaccccaccggggtggcggcctgccgc
aggtcggggcggctggtggtggcacatgacggcaagaagaggatccacgtctttgggccc
agcggatcctgcctgcagcggtttggggagcggggggacgcaggcaacgatatcaagtac
ccgcttgacgtgacggtcacctcagatgggcacgtggtggtcaccgatggcggggaccgc
tccgtgaaggcctttgattttgaggggaggggggtcctggccgtccaggaaggtttctgt
ttgccatggggcttggatgccacccccgagagtgaagtcatcctgaccgactcggaggca
ggggctctctaccgcttggcagccgacttccagaaggggaaattaaagaagtgtcagatg
atccggtcgcagctcgtcagcccgaggggggttgcagtctcccagacctcgggtgccatc
gtggtaatcgagcacctgaaagctcaaggaccgagcaacagcagcacccgagtgaagata
ttcagtgcagagatggatctcgtcggccagatggatagctttgggctcaacctcattttc
ccctccaaaatatatactatggctgtggcctttgacaaagagggtcgcgttgtagtcacg
gatgtctgtagccaggctgtaatatgcttagggaaacctgaggagtttcccatctttaac
cctctaattagccatgggctttcttatcccgtaggactggcttacatggcaaacaattct
cttgctgtcttagacagtggcgatcattcagtaaaaatatatagctccacctga
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