Chroicocephalus ridibundus (black-headed gull): 134511616
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Entry
134511616 CDS
T10910
Symbol
NUP153
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup153
KO
K14296
nuclear pore complex protein Nup153
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03013
Nucleocytoplasmic transport
crid03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134511616 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
134511616 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crid03019
]
134511616 (NUP153)
Messenger RNA biogenesis [BR:
crid03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134511616 (NUP153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
134511616
NCBI-ProteinID:
XP_063181922
LinkDB
All DBs
Position
2:complement(73339805..73385099)
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AA seq
1457 aa
AA seq
DB search
MASGGGDGGGGGGGGGGKIRTRRYHLGTAKPPYARSKQQGIISRVTESVKNIVPGWLQKY
FNRSEDECVDTNESTNQEESPVNYHHDYANEDTTVIDGRVTPESARINLEEPSTSRSALN
FSDVLTRPSLHRSHLNCTMLDSTVPHCQPSTSSSLGIGSPGLSLVKEIKDSTSQHDDDNI
STTSGFSSRASDKDITVSKNTSAPLLWSTEAERSHSLSQHPATSSKKPAFNLSAFGSPSP
SLGNTSVFKTSQLGDSPFYPGKTTYGGAAAAARETKARIAPYQPPVRRQMKAKQASVQSY
GVTSSTARRILQSLEKMSSPLADAKRIPSSVSSPVSSPVDRSVLNITSFQSRRKQMESQH
PPVQKLVTPKAISLSVSRTQYFKPSLTPATDSSKIQQRVDIKHKGTREKSFPAEQQVKPS
ESNLTYPKFGTPASNGLSSGGVGVGGGKMRRERGVHYVSKPGQEQQEVEEPVLPKVPLPI
STASLPSFNFSFLASSSVSSSPSTVSTAVMNKVQPASNVGSPVFRFSSPIVKSTEAEVLP
PLSQIGFTFSVPVVKSAELSGSSDTPVTSLLTLDTTTVNSTSNKKEEKEEYDGLSKPAKV
LKEGSVLDILKSPGFMSVKTHSSTSAQPVTSTVVYTRPAISSFSAGKDTSKQASSFWQSD
THDPCLQNKTTDGKCVTCQAAKVSTVESTKQTISSSQCVTSKAAVPAAGTLGFEDKFKTA
PNTWDCDTCLVQNKPEATKCIACETPKPGTGVMPALTLPVVTDSSVTVTSSSSSTDTTVT
LGFGDKFKKPKGSWDCAVCLVSNKAEDSKCVACQSEKPGSSVPVTSSSVSTFSASSGGFL
DLDKFKKPEGSWDCEVCLVQNKAEATKCVACESAKPGTKAELKGFGTPTGSTNAAMPSFT
FGVQSSSSESSHTLGSTGNFKFGEQGSFKFGVASEPASSNTVTGGFKFPTSSGDFKFGVS
SSDSKSEDSKKEGKSNSFTFGLPSTSSQAPSTFQFGTASLGQQEKKEEQVLGGFGFGTSS
TSSVTTNENKTGVSSGFTFGTVAEKEVASPALAFKKSDEKKDETLPTKGGFSFGSVESAP
ASQFVLGRTEEKQDSVTSAAPLAFGKKADDEELKAQPIFSAGTAEHTKEESTAKPMFNFS
FVKPSEKETEQAKPSFTFGAQTSTSDQGAAKPSFSFLSSSSSSTVVPTTSANSSSVFGSA
ISSSNPQPVPAPFVFGQPSNTVSSSVFGNSAEPAASQSFGFSQENKPATTSSSTGTALAS
FIFGSGASSTNAANSGFTFGATTTSSSTGSSSSFLFGPGPPAPAAGPAFGASQPPAFGQS
QGSSQPSAPSFGSLSTTLFSAGAQPAPPAFGSVTSSTQPSMFGQQATQQPGFGSGTPSAG
SVFQFGSNTSNFNFPNNPSVFTFGADPPAPAQPSGSSGFSFSQPPAFTVGTNGKNVFSAS
GSSVSGRKIKTAVRRRK
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggaggcggcgacggtggtggcgggggggggggtggcggcgggaagatccgg
acccggcggtaccaccttggcaccgcgaagcctccctatgcccggagcaagcagcaggga
atcattagcagagttacagaatcagtgaaaaacattgtaccgggatggttacagaagtat
ttcaatagaagtgaagatgaatgtgtagatacaaatgaatctacaaaccaggaagagagt
ccagtaaactatcaccatgattatgcaaatgaagataccacagtgattgatgggagagtc
acgcctgaatcagcaagaattaatttagaagaaccatccacgagtaggtctgcattgaac
ttctcagatgtgttaacaaggccctctcttcatcggagccatttgaactgtaccatgttg
gattccaccgtaccacattgtcagccctctacgtcatcttcacttggcattggcagtcct
ggactgtctcttgtaaaagaaataaaagattctacctctcagcatgatgatgataacatc
tcaacaaccagtggcttctcctctagagcatctgataaagatatcacagtttcaaaaaat
acttcagcaccactgctctggtccacagaggctgaaagatctcattccctctcgcagcat
cctgcaactagctctaaaaaacctgcattcaatttatctgcttttggatctccctctcct
tcacttggaaacacttctgtctttaagacaagccagcttggggattctccattttaccct
ggaaagaccacttatggcggtgcagctgcagcagcaagggagacgaaagcgcgaattgct
ccttatcagcccccagtaagaagacaaatgaaagctaaacaagcaagtgtgcaatcctat
ggtgtgacaagttccacagcgcgacgcatcttgcagtcattggagaagatgtcaagtcct
ttggcggatgctaaaaggattccgtcttctgtttctagtccagtgtcttctcctgtggac
aggagcgtgctgaatattactagcttccaatccagacgaaaacagatggaatcgcagcat
ccacctgtccagaaactcgtgacaccaaaggcaatctctctgtcagtgagtcggacccaa
tattttaaaccatctctgactccagctactgattccagcaaaattcaacagagggtagac
ataaagcacaagggcacaagagagaagagttttcctgcagaacagcaagtaaaaccatct
gaaagcaatttgacctaccctaaattcggtactcctgcatccaatggtctgtcttcagga
ggagtgggtgttggcggcggcaagatgagaagggaaagaggagtgcactatgtatcaaaa
cctggacaagaacaacaggaggtggaggaaccagtactaccgaaagtacccctacccatc
agtactgcatcgctgccttcgttcaactttagttttcttgccagtagttctgtctcatca
tcaccaagcactgtttcaacagcagtgatgaacaaggtacaaccagcaagtaatgttggc
agtcctgtgttcagattttcatctccaattgtgaaatctactgaggcggaagtgctacct
ccgttgtctcagattgggtttacatttagtgttcctgttgtaaaatcagcagagctttct
ggatccagtgatacaccagtgacgtccttactcactctagataccaccactgtaaacagc
accagcaataagaaggaagaaaaagaagaatatgacggcctctccaaacctgcaaaggtc
ttaaaggaaggaagtgtgttagacattctaaaaagccctggcttcatgtctgtgaaaaca
cactcctctacatctgcacagcctgttacaagcacagtggtctatacgaggcctgcaata
agtagtttttctgcaggcaaagacacctcgaaacaagcatcctcattttggcagtctgac
acacatgacccatgtctgcaaaacaaaaccacagatggcaaatgtgtaacatgtcaagct
gctaaagtgtcaacagttgagagtacgaaacagacgataagctcgagtcaatgtgtcacc
tcaaaggcagcagtccctgcagctgggacgttgggctttgaagacaaatttaaaacagca
cccaacacatgggactgtgacacctgtctggtccagaacaaacctgaagctacgaaatgt
atagcctgtgagacaccaaagcctggaacaggagtaatgcccgctctgacgttgccagtg
gtcacagacagctccgtgacagtgacatcctcctccagcagcactgacacaacagtcact
ctggggtttggagacaaatttaagaagccaaaaggctcttgggactgtgcagtgtgcctt
gtatcaaataaggcagaagacagcaaatgtgtagcttgtcagtctgagaaaccagggagt
tcagtgcctgtgaccagtagcagtgtttctacattttctgcttcttcaggaggatttctg
gatttagacaaattcaagaagcctgaaggaagctgggattgtgaggtctgcttggtccaa
aacaaagcagaagccacaaaatgtgtagcctgtgaaagtgcaaagccaggcacaaaagca
gagctcaaaggttttggtactcctactgggtccacaaatgctgcaatgccatcatttaca
tttggtgtccagtcgtcctcctctgaatcttctcatacattaggtagcacaggaaatttt
aaattcggagaacaaggaagcttcaagttcggcgttgcatctgaacctgcatcctccaac
actgtgactgggggttttaagtttcctactagttcaggggacttcaaatttggagtttct
tcctcagactctaaatcagaagacagtaaaaaagaaggtaaaagtaacagttttaccttt
ggacttccatctacaagcagtcaggctccttcaacatttcagtttgggacagcgagcctg
ggacagcaggaaaagaaagaggaacaagttttgggaggctttggttttggcacgagttct
acttcttccgtaactaccaatgagaataaaaccggagtcagcagcggcttcacttttgga
actgtggcagaaaaggaggtagcatcaccggctcttgcatttaagaagtcagatgagaaa
aaggatgaaactcttccaacaaagggaggcttctcttttggcagtgtggagtctgcgcct
gcctcacagtttgttttgggaaggacagaagagaaacaggactcggtcacttctgcggct
ccattggcgtttggaaagaaagctgacgatgaagagttaaaggcacaacctatcttttca
gctgggacggctgagcataccaaagaggagagcacagcaaaacctatgttcaattttagt
ttcgtcaaaccatcagagaaggaaacagagcaggcaaagccgtcttttacatttggggca
caaaccagtacttcagatcaaggagcagcaaagccatccttcagcttcttgagctcaagt
tcctccagcacagttgtacccaccacgtcagccaacagcagcagtgtgtttggcagcgcc
atctcttcctcaaatcctcagccagttcccgctccctttgtgtttggacaacccagcaac
actgtgagcagctctgtttttggcaattctgcagaacctgcagcatctcagtcatttggc
ttctctcaagaaaacaaaccagcaaccacatcttccagcaccggcacggctcttgcttca
tttatttttggttcgggagccagcagtaccaatgcagcgaattcaggctttacctttgga
gccacaaccacgtcaagttcaacagggtcgtcctcttcgtttctgtttggccctgggcct
ccagcgcctgctgccggcccagcgtttggcgccagtcagccaccagcatttggccagagc
caagggtccagccagccaagcgctccaagttttggatcgctgtcgacaacgctgttttcg
gctggcgctcagcctgctcctcctgccttcggctcggtgacgagcagcactcagccctcc
atgttcggacagcaagcgacccaacagccagggtttggctctggtacgcccagtgctggt
tctgtattccagtttggaagtaatacgtctaacttcaactttccaaataaccccagcgta
tttacttttggtgcagatcctcctgcaccggcacagccttctggctcttcgggattttcg
ttcagccagcctccagcatttacagtggggactaatggaaaaaatgttttctctgcctct
ggatcttcagtttctggtcggaagataaagactgcagttagacgtagaaaataa
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