Chroicocephalus ridibundus (black-headed gull): 134511659
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Entry
134511659 CDS
T10910
Symbol
RPP40
Name
(RefSeq) ribonuclease P protein subunit p40 isoform X1
KO
K14530
ribonucleases P/MRP protein subunit RPP40 [EC:
3.1.26.5
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
134511659 (RPP40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crid03009
]
134511659 (RPP40)
03016 Transfer RNA biogenesis [BR:
crid03016
]
134511659 (RPP40)
03029 Mitochondrial biogenesis [BR:
crid03029
]
134511659 (RPP40)
Enzymes [BR:
crid01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
134511659 (RPP40)
Ribosome biogenesis [BR:
crid03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
134511659 (RPP40)
Transfer RNA biogenesis [BR:
crid03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
134511659 (RPP40)
Mitochondrial biogenesis [BR:
crid03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
134511659 (RPP40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
134511659
NCBI-ProteinID:
XP_063182042
LinkDB
All DBs
Position
2:77147043..77167121
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AA seq
585 aa
AA seq
DB search
MLRDVMDDSLSAAIQCLSISLRGPDETGLYFGSGLLHSHGIYMFLSFRGVEGSWLLDALK
AAQCHQPLEDTLSPVRFVPPKCPCLLKPSPSRKHALGGATTLPLNPCGARLPLAEGLLKH
AHAVTASNCSSCTTKPVWVFLPDSRWAFSEHERTKCTEMPHGPGGEGMGEACHGCRPLAR
AAHAHTSTPSALRGSDLIAQLHPRPSLWSLPTALGGVVGGAVSPVAAAAEGDVDAGAAAA
AAPPGPAAPAGLREGPHAAPALAARRARAGPRLQLPLLKSSIADVGEYYLVRNLSVHELV
AHEFIDAFVKKGSCYALTYNTKIDQDNTAALLPNGKLILSVDKDTYEELGLQGRPSQYSG
KKVMRYIITIDLTDPGFHPDSKKHNRVLWALKEKKPLEFDFLLAWYNTGAEGSTLMSYFS
KNQIQALKPKITFSTLRDLQCPVLESNELQGKPDESCSTEELFEWLGAVWNQVSLDNKSS
SFLSTYCCPQPNTVVEKAFLCTITGFIIPEKIIHLLEQLCCYFGEPKLAYWLTLTVHGFA
DSPVSWRESEHGFHKGGENLYNFVIFRNLDYWLQMAVGTNDDCPP
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgctcagagatgtaatggacgacagcctttcagcagcaattcagtgtctcagtatatct
ctccggggtcccgatgaaactggactgtatttcggtagtggcctgttgcacagtcatggc
atttacatgtttctcagtttccgtggggtagaaggaagctggttgctcgatgccttgaag
gctgctcagtgccatcagccactcgaggacacgctttcacctgtccgttttgtccctccc
aagtgtccatgtctcctaaaaccatcccctagcaggaaacatgccctggggggggcaacg
acactccccctcaacccctgcggggcccggctcccgctcgcagagggactcctgaagcac
gcacatgcggtaactgcctccaactgcagctcctgcaccacaaaacccgtgtgggttttt
ctgcccgactcccgctgggctttttctgaacatgagaggaccaaatgcaccgagatgcca
cacggaccgggcggggagggaatgggcgaggcctgtcatggctgccgccccctcgccagg
gccgcgcacgcgcacacctccactccctccgcgctccgcggaagtgacctcatcgcgcag
ctccatccgcgcccctctctctggtcgctccccaccgctctgggcggcgtggttgggggc
gctgtctccccggtggcggcggcggcggagggggatgtcgatgccggtgccgccgctgcg
gcggctccaccaggccccgcggcacctgctggtctgcgagaagggccacacgcggcaccc
gcgctcgcggcacgccgcgcacgtgcgggaccacgcctacaactgccgctgctgaaaagt
agcattgcggatgttggagagtactacctggtgaggaatttatcggttcatgagttggtc
gctcacgaattcatcgatgcttttgtgaagaaaggttcatgctacgcgcttacctataac
acaaaaattgatcaagataatactgcagctctgctaccaaatggaaaactaattctatca
gtggataaggatacctatgaggaacttggactgcaaggtcgcccttctcagtattctggc
aaaaaagtaatgagatatattataactattgacttgactgatcccggctttcaccctgat
agcaagaaacataacagagtgctttgggccttgaaagaaaagaaacctttagaatttgac
ttcctattggcttggtataatacaggtgcagagggatcaacgttgatgtcatacttttca
aagaaccaaatacaggctctgaagccaaaaataacattcagcacattaagggacttgcag
tgtccagtgttagaaagtaatgaactccaagggaagccagacgagtcctgcagtacggag
gaactgtttgagtggctaggtgctgtctggaatcaagttagcttagacaacaaatcatct
agctttttatcaacgtattgctgtcctcagcccaacacagtggtggaaaaagcttttttg
tgcacaatcacaggctttataattcctgagaagataattcatttattggagcagctatgt
tgctattttggtgaaccaaaactggcatattggctgaccttaactgtgcatggctttgca
gacagccctgtttcttggagagaaagtgaacatggtttccacaagggaggagagaacttg
tacaactttgtaatttttagaaatctggactactggcttcagatggctgtaggaactaat
gacgattgtcctccataa
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