KEGG   Chroicocephalus ridibundus (black-headed gull): 134511879
Entry
134511879         CDS       T10910                                 
Symbol
PPP4R1
Name
(RefSeq) serine/threonine-protein phosphatase 4 regulatory subunit 1 isoform X1
  KO
K15424  serine/threonine-protein phosphatase 4 regulatory subunit 1
Organism
crid  Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:crid00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:crid01009]
    134511879 (PPP4R1)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:crid03400]
    134511879 (PPP4R1)
Protein phosphatases and associated proteins [BR:crid01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-4
    Regulatory subunits
     134511879 (PPP4R1)
DNA repair and recombination proteins [BR:crid03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Protein phosphatase 4
     134511879 (PPP4R1)
SSDB
Motif
Pfam: HEAT HEAT_2 HEAT_EF3_N TOR1L1_N Cnd1 WRNPLPNID Htt_N-HEAT_1
Other DBs
NCBI-GeneID: 134511879
NCBI-ProteinID: XP_063182607
LinkDB
Position
2:113339438..113408701
AA seq 961 aa
MTRSRARVGQAGLRRAFPRGSGGGGGAAQGVGVDDYSSESDVIIIPSALDFVSQDEMLTP
LGRLDKYAASENIFNRQMVARSLLDTLKEVSDDERDCIAVLERISRLADDSEPTVRAELM
EQVPHIAMFCQENRPSIPYAFSKYLLPIVVRYLADQNNQVRKTSQAALLVLLEQELIERY
DVETKVCPVLIDLTAPDSNDDVKTEAVAIMCKMASMVGKDITERLVLPRFCEMCCDCRMF
HVRKVCAANFGDICSVVGQQATEEMLLPRFFQLCSDNVWGVRKACAECFMAVSCATSQEV
RRTKLSTLFINLISDPSRWVRQAAFQSLGPFISTFANPSSSGQYFKEEDGKNPEDCGSAQ
ENSEQVRTTEDVTTEDEHNSTEDLSSHVDNDDFVTKLENAMEDQNTVSNNSQRESDFQTE
SSFRCTLSSESCGEMAEESERSSHCCTAGLREAGLNSQETSLSEQELYNSFHFWRTPLPE
IDIDFELQQTSEIILDREIQELTMPVSSNIPMATRKELEEMIENLEPHMDDPDVKAQVEV
LSAALRASSLDPQEETMASIGKGTDSQTELTNDQQNFKPILGDIVPLIGDTVENMDSTLH
YIHNDSDLSTNSSFSPEEERKSKVQDVVPQALLDQYLSMTDPSRAQTVDTEIAKHCAYSL
PGVALTLGRQNWHCLKDTYETLASDMQWKVRRTLAFSIHELAVILGDQLTAGDLVPVFNG
FLKDLDEVRIGVLKHLHDFLKLLHLDKRREYLYQLQEFLVTDNSRNWRFRAELAEQLILL
LDLYSARDIYDYLRPIAFSLCADKVSSVRWISYKLVSEMVKKLYMASTSTFVIDLMNELV
EKFCRCRKWSGRQTFVFICQTISEDDCLPMDQFAVHLLPHLLHLASDRVPNVRVLLAKTL
KQTLLEKEYFLNSANSHQEAVEQTIMALQMDDDNDVKYFASIHPASTKIADDAMSTASST
Y
NT seq 2886 nt   +upstreamnt  +downstreamnt
atgacacgcagccgggcacgcgtggggcaagccgggctccgccgagctttcccgcggggg
agcggcggcggcggcggcgccgcgcagggggttggtgtggatgactacagctcagagtct
gatgtgattattataccttcagccctggactttgtctcacaagatgaaatgttgacgcct
ttgggaagactggacaagtacgctgcaagtgagaacatatttaacaggcaaatggtggct
cgaagtttgctggacactttgaaggaagtcagtgatgatgagagagattgtattgctgtg
ctggagagaatcagcagattagctgatgattcagagccaacagtacgggcagaactgatg
gaacaggtgcctcatattgctatgttctgtcaagaaaacagaccttcaatcccatatgct
ttttccaaatacttactgcctattgtggtacgataccttgcagaccagaacaaccaggta
agaaaaacaagccaggcagcattgttagttctgttggagcaagaacttatagagagatat
gatgtggagaccaaagtatgccctgttctgatagatctgacagctccagacagcaatgat
gatgtgaagaccgaagccgtggctataatgtgcaaaatggcctccatggtgggaaaggac
atcacggaaagacttgttcttcctaggttttgcgagatgtgctgtgactgcagaatgttt
catgttcgtaaggtatgtgcagccaattttggagatatctgcagtgtggttgggcagcaa
gccactgaagaaatgctgctgccgaggtttttccagctctgctctgataacgtgtgggga
gttaggaaagcttgtgctgaatgcttcatggcagtttcttgtgcaacatcacaggaagtc
cggaggacaaaattgtcaaccctttttattaatttgattagtgatccttcacgatgggtc
cgtcaagcagcttttcagtctctggggcctttcatatcaacttttgctaatccatccagc
agtggccagtactttaaagaagaagatggtaaaaacccagaagattgtggttctgcacag
gaaaacagtgaacaagtcaggactacagaagatgtcacaacagaggatgagcacaacagc
acagaggatctgtcttcacatgtcgataatgatgattttgtaacaaaacttgaaaatgcc
atggaagatcaaaatacagtgtcaaataactcccagagggaaagtgatttccaaactgag
tcatccttccgttgcactttgtcttcagaatcttgtggggaaatggctgaggagagtgag
cgaagttctcattgctgtacagcaggtctgcgggaggctggtctgaattcacaagaaacc
tctctttcagagcaggaattgtataactctttccatttctggaggactccacttcctgaa
atagatattgacttcgagcttcagcagacttctgagataatactcgatagagaaattcag
gaactcactatgccagtgtcttcaaacattcctatggcaacaaggaaagaattggaagaa
atgatagaaaatttggaaccccatatggacgatccagatgttaaagcacaagtggaggtg
ttgtctgctgcactcagagcatccagtttggatcctcaagaagagacaatggccagtatc
ggcaagggaacagactcacagactgaattaaccaatgaccaacaaaattttaaacctata
ctgggtgatattgtgcctttaattggtgacactgttgagaatatggattctacacttcac
tatattcataatgattcagatttgagcaccaacagtagtttcagccctgaagaagaaaga
aaatccaaagtacaggatgttgtacctcaagccttgctggatcagtatttgtcaatgact
gatccatctcgcgcacaaacagttgataccgagattgccaagcactgtgcctacagcctg
ccaggtgtggcacttacattaggcagacagaattggcactgtttgaaagatacctatgag
acactggcatctgacatgcagtggaaggttcggcggacactagcgttttctatacatgaa
cttgctgtcatccttggagatcagcttacagctggagatttagttcctgtcttcaatggc
tttttaaaagatctagatgaagtcaggataggtgtgcttaaacacttgcatgactttctg
aagcttcttcatcttgacaaaaggcgagagtatctttatcagctccaggaattcctagtg
actgataacagccggaactggcgtttccgtgcagagcttgctgagcagctgatcttgctt
ctagatctctacagtgccagagacatttacgactacttgcgacctatcgctttcagcctt
tgtgcagacaaagtgtcttctgtccgttggatttcttacaagctggttagtgaaatggta
aaaaagctgtacatggcttcaacatcaacctttgtgatagacctcatgaatgaacttgtt
gaaaagttctgtagatgccgcaaatggtctggtcggcaaacttttgtctttatttgccag
actatcagtgaggatgactgcctgcccatggaccagtttgctgtgcatctgttaccacac
ttattacacttggcctctgacagggttccaaatgttcgagtcctgcttgcaaaaacattg
aagcaaactcttttagagaaagaatattttctaaattctgccaactctcatcaagaagct
gtggagcaaacaattatggcgcttcaaatggatgatgacaatgatgtcaaatactttgcg
agcatacaccctgccagtaccaaaattgcagatgatgccatgagcactgcttcatcaact
tattaa

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