Chroicocephalus ridibundus (black-headed gull): 134511976
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Entry
134511976 CDS
T10910
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134511976 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
crid01009
]
134511976 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crid04131
]
134511976 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
crid03029
]
134511976 (RB1CC1)
Protein phosphatases and associated proteins [BR:
crid01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134511976 (RB1CC1)
Membrane trafficking [BR:
crid04131
]
Autophagy
Autophagosome formation proteins
ULK complex
134511976 (RB1CC1)
Mitochondrial biogenesis [BR:
crid03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
134511976 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
134511976
NCBI-ProteinID:
XP_063182929
LinkDB
All DBs
Position
2:complement(125802283..125879956)
Genome browser
AA seq
1594 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVADLKHAIQTKYKIAIQHQVLVVNGGECMAPDRRVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTYSYQKLLFKFENVYSSYLQ
SIDDIKLKLTHLGSAVSIMAKIPLLECLTRHSYRECLGRLDSSAEHGGAESEETEDGKLV
SSDISKVNSKSMLASFCKSVEHSALEGTDSENVKGDKESGENATVQDNETSVELKDDDQP
SFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIQPFLAECRQTIAKLDNQNMKAI
KGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHANQLMI
MLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTELLER
VKVVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALIKDGKHLYEAEKAKRESFGKLF
RKSFLRNRLFRGLDSWPPSFCTRKPRRFDSELPDISLSDLQFLQSFCPSEVQPLLRVPIL
CDFEPLHQHVRALHNLVKAAQSLDEMSQTITDLLNEQKASNSQASPQSATTPRMESTTAT
AIATSSRTPPSLSLQGPLCPPVCPPAPLEELSPDSIDAHTFDFETIAHPNLEQALKQGSL
DLDSLAESPESDFMSAVNEFVIEENPVSPNVISDPQSPEMMVESLYSSVINAIDNRRMQD
TNTCVKDVSVENASLSACVEKCKVIAQDSKVHLRGIKEDLCHFRTLVQREQCDFSNSLKC
TSLEIVNTIEKVKLSLEKTLKDKHQKELQSLKSEYETKINKLVEDGEENKKKIKKLKGDL
LGLEEVLQNKNDEFAMVKNEKEAVVCLQNEKDQKLLELECQMETQNCEIKELRQSREIVL
EDLKKLHVENNEKLQLLRAELESLEQSHLKELENNLQARHLQEFEKVLAEHKDCLDKLKK
ENQHRLEQMQESHAVVVQEKQQQVEELQLKLSDLSDLRCKLEVELALKEAETDEMKLLLE
ESRNQQQETLKSQIDKETESLKREIDKLNNKIQINNDEYQVGLSELRTLMTIEKDQCISE
LVDRYEEESNLLRTELNKVTLLHQKTSEAEKRLSEQITELQSKLELEANALEKEKTEKLS
LCEQQEKYEAIIHKLKEEKELLVSNQEQDRQLLIQKLNCEKEDAVQTACKEFELQREAAE
KGLLEKIQQLEMQVNRSPPAESSAESSLVAELQEKLQEEKMKFLEQLEEQEKRKNEEMQN
IRTSLTAEQQTNFNTVLAREKMKKENIINDLSDKLKMLTQQQEKDKDLIETLSEDRARLL
EEKKKLEEEVNKLRSSNFSPSTYSVAASEVCGACAADIPTDTDRLVSDIGAEGRLDSTME
TSMMAVHENVHMSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRD
FQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGECASGASRRPWVLGKVM
EKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgaagctatatgtgtttctggtcaacaccggaactacccttacctttgacacagaactt
gctgtacaaaacgtggctgatctgaaacatgcaattcaaacgaaatataagattgccatt
cagcaccaagtactggttgtcaatggaggagagtgtatggcaccagacagaagagtgtgt
agttacagtgctggaacagataccaacccaatttttttattcaacaaagaaatgatttta
tgtgaacgtccaccagctatccccaaaaccacgttttcagcagagaatgagatggaattg
aaagtagaagaatctctcatgatgcctgcagtgtttcatacggtagcatcacggacacaa
cttgctgtggaaatgtatgaggttgccaagaaactttgctccttttgtgaaggtcttgta
catgatgaacatcttcagcatcaaggctgggctgccataatggccaacttggaagattgt
acatactcttaccaaaagctacttttcaagtttgaaaatgtatattcaagctatttgcag
tccatagatgatatcaagttgaaacttacacacttgggttctgctgtttctatcatggcc
aagataccgctgctggagtgcctaacgagacatagttacagagagtgtttaggaagactg
gattcctcagctgagcatggaggggcagaaagtgaagaaactgaggatgggaaattggtt
tcttctgatatatctaaagtgaacagtaaatcaatgttagcctcattttgcaagtcagtt
gaacattcagctttggaaggcacagattctgaaaatgtaaaaggtgataaggaatctggt
gaaaatgctactgtccaggacaatgaaacatcagtagaattgaaagatgatgatcagcct
tccttcaacgtgtctttgttagactggataaatgttcaagatagacctaatgacgttgaa
tcgctggtcagaaaatgttttgattctatgagccggcttgatccaaggatcatccaaccc
tttctggcagaatgtcgacaaactatcgccaaactagataatcagaacatgaaggctatt
aaaggccttgaggataggctctatgcattggaccagatgatagcaagctgcagcagactg
gtgaatgaacaaaaagaacttgctcagggatttttggctaatcagaagagagctgagaac
ttgaaagatccttctgtgctgcctgatttgtgtttgagtcatgcaaatcagctgatgatt
atgttaactaatcacagaaaactgttagatattaaacagaagtgtaccactgccaaacag
gagcttgcaaataatctacaagtcagattgaagtggtgttgttttgtaatgcttcatgct
gaccaagatggagagaaactacaagcattgcttcgtcttgtaacagagctcctagaaagg
gtcaaggttgtagaggctctcagtactgttcctcaaatgtactgtctagctgttgttgag
gttgtgagaagaaaaatgttcataaaacactacagggagtgggcgggtgctttgataaaa
gatgggaaacacctgtatgaagctgaaaaggcaaaaagggaatcttttggtaaactgttc
aggaagtcttttctaaggaatcgtttgtttagaggacttgattcctggcctccatccttt
tgtacacgaaaacctcgcagatttgacagtgagcttccagatatctcattaagtgacttg
cagtttttgcagtctttttgtccgtcagaagtacagccactactcagggttcccatactt
tgtgactttgaacctcttcaccagcatgtacgtgctctacataacctggtaaaggcagca
cagagtttggatgaaatgtcacaaaccattacagacctgctgaatgaacaaaaggcctcc
aatagtcaagcatcgccacaatctgctaccacaccaaggatggaaagtacaacagcaacc
gcaattgctacctcttcaagaactcctccatcactcagtcttcagggtcccctctgtccg
cctgtgtgtcccccagctccattagaagagctgtctccagacagcattgatgctcataca
tttgattttgaaactatcgcccatccaaacttggagcaagctcttaagcaaggatcatta
gacttggattcattagcagaaagtccagaatctgactttatgtcagcagtaaatgaattt
gtaatagaagaaaatccagtgtctcctaatgtaataagtgatccacaaagtccagaaatg
atggtggaatctctttattcttcagttatcaatgcaatagacaataggcgtatgcaagat
acaaatacttgtgtaaaggacgtttcagtagaaaatgcatctctcagtgcttgcgtggag
aagtgtaaggttattgcccaagactcaaaggtacacttaagaggtataaaagaagatctt
tgccactttagaacacttgtacaaagagaacaatgtgacttttctaattctttaaaatgc
acttcattagaaatagtaaataccattgagaaggtaaaactttcacttgaaaaaacacta
aaagataaacatcaaaaagaattacagtctttgaaaagtgaatatgaaactaaaataaat
aaattagtggaggatggtgaagaaaataagaagaaaattaaaaagttaaaaggtgactta
ttaggccttgaggaagttcttcagaataagaatgatgaatttgcaatggtgaaaaatgag
aaagaagctgtagtttgccttcagaatgaaaaagaccagaaattacttgaattggaatgc
caaatggagacacaaaattgtgaaattaaggaactgagacagtcacgtgagatagtcctt
gaagacttgaaaaaacttcatgttgaaaacaatgaaaaactacaacttctgagggcagaa
cttgagagtttagagcaaagccatttaaaagaactggaaaacaacctacaggccaggcat
ttacaggaatttgagaaggtgctagctgagcacaaggactgtttagacaaattaaaaaaa
gagaaccagcatagacttgaacaaatgcaggaatctcatgcggtagttgtgcaagagaaa
caacaacaagtagaagagttgcaactcaagctttcagatctctctgatttgaggtgcaaa
ttagaagttgaacttgccctgaaggaggcagaaactgatgaaatgaagcttcttttggaa
gaaagcagaaaccagcaacaagagaccttaaaatctcagattgataaggaaacagaaagc
ttaaaaagggagatagataaattaaacaataaaatacaaattaacaatgatgaatatcaa
gtgggcttatcggaactaaggactctgatgacaattgagaaagatcagtgcatttctgag
ctggtagacagatatgaagaagagtcaaacctgcttagaaccgaactaaataaagtaacg
cttcttcatcaaaaaacttctgaggccgaaaaaagactttcagagcaaataacagagcta
caaagtaagttagagttggaagcgaatgccctagaaaaagaaaaaacagaaaaattgtct
ctctgtgagcagcaggaaaaatatgaagctattatccataagcttaaggaagagaaagaa
ctgttagtatctaaccaagaacaagacaggcagttgctcattcagaagctcaattgtgaa
aaagaggatgcagtacaaactgcttgtaaagagtttgaattacagagggaagctgctgaa
aaagggcttttggaaaaaatacaacaacttgagatgcaagtaaatcggagtcctcctgct
gaatcatctgctgaatcaagcttggttgctgaacttcaagagaagcttcaagaagaaaaa
atgaagttcttggagcaacttgaagaacaagagaaaagaaagaatgaagaaatgcagaac
atcagaacatcgctcactgcagaacagcagaccaactttaacactgttctggcaagagag
aaaatgaaaaaagaaaacataattaatgatcttagtgacaaattaaaaatgctaacgcaa
cagcaagaaaaagataaggatttgattgaaacactttctgaagatcgagctcgcttactt
gaagagaagaagaagcttgaagaagaagttaataaactgaggagtagtaatttttctcca
tcaacctactcagtggcagcttcagaagtttgtggagcctgcgcagctgatattcccact
gacacagacaggctggtttctgacattggagctgaagggagactggactccacgatggaa
accagtatgatggctgtgcatgaaaatgtccatatgtctgaagaaaaacagaggataatg
ttgctagaaagaactttgcagttgaaagaggaggaaaataagagattaaatcaaagattg
atgtcccagagcatgtcatcagtatcctcaagacattctgaaaaaatagcaattagagac
tttcaggttggcgatttggttctcatcatcttggatgaaaggcatgacaactatgtattg
tttactgttagtccaaccttgtatttcttgcattcagaatctcttgctgcactggatctc
aaaccaggtgagtgtgcttcaggtgcatctaggagaccttgggtgctaggaaaagtgatg
gaaaaagaatattgccaggcaaaaaaggcacaaaacagatttaaagttcctttgggtaca
aaattctacagggtgaaagcagtaccatggaacaagaaagtataa
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integrated database retrieval system
