Chroicocephalus ridibundus (black-headed gull): 134511988
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Entry
134511988 CDS
T10910
Name
(RefSeq) lipoxygenase homology domain-containing protein 1-like
KO
K19538
retinitis pigmentosa 1
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
crid03037
]
134511988
04812 Cytoskeleton proteins [BR:
crid04812
]
134511988
Cilium and associated proteins [BR:
crid03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
134511988
Cytoskeleton proteins [BR:
crid04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
134511988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLAT
DUF7755
ATS3
Motif
Other DBs
NCBI-GeneID:
134511988
NCBI-ProteinID:
XP_063182948
LinkDB
All DBs
Position
2:126606190..126750006
Genome browser
AA seq
2096 aa
AA seq
DB search
MFESVRNPRMYLKIKDGQCNGTGTGDEYCHFKIEKNLETGSVSLESVQNKGIYVGLLPDG
QTKPVINTGERNILFYPQVIKFGREEPMGTSAAASQETKDFRESQLQPAKAQKPVSQSLS
TFPPSKEMRNPQGGECPLPSDDEWKVSMLTGNAGTEANVVLWICGDRGVAGPITLGKDNR
KQLFLPRQEDEFQVKIKSIGNIYKIRIELDGLLNEQSEWNLQRVTLQHLKSKKTLNFPAN
TWLSKNCDDRDFVCELPVVEAGKPIYPVVLYHVYVYTGDLEQADTDSAVYLCIYGKRGDS
GLRLLHKSGIPVTFQRGMINAFEVEAVSLGKLQKVLLRCEANAKSQYWYCDKVIVREAES
NSEYVFHCERWLPFMSQGVIHSEIELYPQEGDWKITVVTGDFETAGTTATVSLYAYGENK
ASGPIVLGSGKHQLFNPNSEDTFKINLRDLGQLYKIRIGHDNTGNDPSWYLEEVRLERVV
PLSDEEICLPVECWLAEDKGEGDTWTEVAIRNPTKDLLPLLVYEVHVYTGAKLGAETDAN
VYINLIGTRGDAGKRKLHRSKNNNIKFRHGQMDIFCIKAVSLGDLEKVLISHDGAGPGNG
WFLDKIVIKHKEGKEAQEVVFPCNRWLGEYQDDGKTERELTANKDGSSKKAFLKAQQWRV
QVKTDGDSPEPQECKRTLVIYGSKGKSHELLLSPQTPGYVCFLPRATDEFIVETGDLGDV
YKIRVSCDEVPGFEGWHLKSFHLEELHTKQELNFDCKCWLSLNRGDKELVKEFPAVNKDQ
KTLPVYKYVVSVHIGDRWGAETFANVYITLYGKRGDTGVRKLHTSLVKGRKFHRNKVDSF
LVEAVSLSHLQKVVIGHDGEGYGAGMYLKMVTVKESQDSDKEWVFPLWNWLDTHLGLCET
VCEIVTVGRRLTSSPKLPEIDMKSSGLWIMDITGSDLSNEDHPICLSFIFYGNLSHKKLP
LQVTGKAIQIKDELANIGSIYKVQVTGPHRELEQPWHLDLLHMKHTGTNEEMYLAFDCWF
NPNEDKCVELPALYADQEPLPVVEYAIHMHTGDLKKADATGEAYLCIQGEKSDSGKRWLN
SRNSLITFARGQVDVFKIKAVYLGKLNQVLVGFKSLKKDEWFLEKIVIKEVLYPFSAHVF
VHNDWINKHSKKDFVEVAIPLKETSVTSLLTKNFDTKSRGRWQMWVHCMQVPEDVPDIQV
VVFGRKGKSPAQKVQNLNNNPFLLTVGDIGDITKVSFVLSGPCLGRGIKLHKLQLKDLDT
KQELGFHTEAQCLFGEDGSETVTELAAVRPDKPPLREVLYSISVHTGTLPASGTDADVFI
TVFGEHGDSCKRRLRHSNLERGQVCISEMRAVDLGQLSKVLVEHHNVGYGAGWYLDQIVI
RESGKTDGQYAFLCQQWLDSGVGDAQTERMLKLLGKVRKEILTGKIYGTWDVLVTTGDIS
SSSINPKMSLTVCGEKGTCTSVIFPKGSLKKKETYETSVELNKKFNTIFKVRLEIEEAGE
GETWHCREVTLQHRESKNVLEFPFYRDFADEEGGRVAELPVLTAGSPFPAVKSYVLYITT
GAPPGSGTDADVYVMLQGLLGDTGRRKLIRKGDDNFTKGKVDVFQVEAVDVGTLQRMVVE
KGKGSDWLLEKIIVKEPAASGTETLFMAQTWLKDSRDRKRSASVTLNATEIQERRSPSAW
PLGKEQMNSEGRWRIYFTKHKEETKTDFEKLSENISKLVMVFYGSNGKSNPVSMENKVEH
QAKNQITYDIHLPFDLGTLYKVRLGLQSLENSISQLSLRHFKMQNTSTLDTFSLTINKSL
PLSLNGDRWIEFPVEWPLKEALSVVTYHLTVFSRNILSERNLLHMAACIYGTHGDTGDRS
LLWSLQNVQQGEDNESFVVTVDAVELGELDKVVLLISSKTDCKVDIKKLHLKEAVKEHPI
YVFEVNEAFSVNANKPEIEREIPVSFIMRGDKQKNDIDNNLHKEGSQTRSLTEYTIKVYT
GDQRGAGTDANVHIILFGNEDKSEVFQLSQSLEHQDPFERGKVDTFKIKTKKLGSLHSIE
IGHDGKGFASGWFLEKVEITDASRNSVYCFSCNRWLAEDESDGRTVVLLYPQLLDF
NT seq
6291 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaagtgtgagaaacccaagaatgtatctgaagatcaaagatggccagtgtaat
ggaacaggcacaggtgatgaatactgtcactttaaaattgagaagaatttggaaactgga
tctgtaagtctagaatcagtgcaaaataaagggatatatgttggtctcctgccagatggc
cagactaagccagtcattaacactggagagagaaacattttattctacccacaggtcatc
aaatttggccgggaagagcctatgggaacatctgcagcagccagtcaagagacgaaagac
ttcagggaatctcaactccaaccagcaaaagcccagaagccagtatctcaaagcctttca
acgtttccaccctcaaaggaaatgagaaatccccaaggtggtgagtgtccccttccttca
gatgatgaatggaaagtgtcaatgctgacaggaaatgcaggaactgaagcaaatgtcgtt
ctctggatatgtggagacagaggagtagctggaccgataactcttggcaaggacaacaga
aagcagctgtttcttcccaggcaggaggatgaatttcaggttaaaataaaaagcattggg
aatatctacaagataagaattgaacttgatgggttactgaatgaacaatcagagtggaac
ttacaaagggtgacactgcaacatctaaagagcaagaaaacactgaattttccagcaaac
acatggttatcaaaaaattgtgatgatagagattttgtctgtgaacttccagtagtagaa
gctggaaaacctatctatccagttgttttataccatgtttatgtctacactggtgatttg
gagcaagctgacacagattctgcagtttacctgtgtatctatggaaaaagaggagattct
ggtctaagacttctgcataaatctggtataccagtgacatttcagagaggaatgatcaat
gcttttgaagtggaagctgtatctcttggaaaactgcagaaggtgctgttgcgctgtgag
gctaatgccaagtcccagtattggtactgtgataaagtcattgtcagagaagctgagagc
aactcggaatatgttttccattgtgaaaggtggcttccatttatgtcccaaggtgtaatt
cattcagaaattgagctgtaccctcaagaaggagactggaagattactgtagtcactggg
gattttgaaacagctggcacaacagcaacagtatccctttacgcttatggagaaaacaaa
gcttctggtcctattgttctgggatctgggaaacaccagctgtttaatcccaacagtgaa
gatacatttaagattaatctcagagatctcgggcagctatataaaatccgcattggccac
gataacactggaaatgatcccagttggtacctagaggaagtcagacttgaaagagtagtc
cctctttctgatgaagagatttgtctacccgtagagtgctggcttgcagaagacaagggt
gaaggtgatacgtggacagaagtggcaataagaaatcccacaaaggatcttttgccattg
ttggtgtatgaggtccatgtatacacgggtgctaaacttggtgccgaaacagatgctaat
gtttatatcaacctcattggaacaagaggagatgctggcaaaaggaagctccatagatct
aagaataataatataaaatttcgacatggacagatggatattttctgcataaaggctgtc
tcactgggagacttggagaaagttctgattagccatgatggagctggtccaggcaatgga
tggttcctggataagattgtcatcaaacataaagaaggaaaggaagctcaggaggttgta
tttccttgtaatagatggttaggtgaatatcaagatgatgggaaaactgagagggagcta
actgccaataaggatggcagttcaaagaaggcgttccttaaagcacaacagtggagagtg
caggttaaaacagatggagattccccagagccccaagagtgtaaaaggacccttgtgatt
tatggctcaaagggtaaaagtcatgagcttctgctttctccacaaaccccaggatatgtg
tgctttctacccagagcaacagatgaattcattgttgagactggagatctgggagatgta
tacaagattcgggtcagctgtgatgaagtgccaggctttgagggttggcatttgaagtct
tttcacttagaagaactacatacaaaacaagaactgaactttgactgtaagtgctggctc
tctcttaacagaggagacaaggagctggtgaaagaattcccagcagtcaataaggaccag
aaaactttaccagtctataagtatgttgtctctgtacacattggtgaccgctggggagca
gaaacttttgcaaatgtttatatcactctctatggcaaaagaggggacacaggtgtgagg
aaacttcatacatctttagtaaaaggaagaaaatttcacaggaataaggtggattcattt
ttggttgaagctgtttctctgagtcatttgcaaaaagtggtcataggacatgatggagaa
ggctatggggctgggatgtacctcaagatggtaacagtcaaggaatcacaagactcagac
aaagaatgggtcttcccattgtggaactggcttgatactcatctgggattatgtgagact
gtgtgtgagattgtgacagttggtagaagattgacttctagtcctaaactgcctgaaatc
gacatgaagtcgtcaggtctctggataatggacatcactggatctgacttgagcaatgaa
gaccatccaatatgcctttcttttatcttctacggcaacctgagtcacaaaaagttgccg
cttcaagttacaggaaaagcaattcagatcaaagatgaactggcaaatattgggtccata
tacaaagttcaggtaactggcccacatcgtgagctagaacagccatggcacttagattta
ctgcatatgaagcacacaggcacaaacgaagagatgtatttagcttttgactgctggttc
aaccctaatgaagacaaatgtgtggaactgccagctctctatgcagatcaggagcctttg
cctgttgtagaatatgcaatccatatgcacacgggagacttgaagaaagcagatgccact
ggtgaggcctatctttgtatacaaggagaaaagagtgactcgggaaaacgatggcttaac
tcaagaaacagcctgatcacttttgctagaggacaggtggatgtgttcaaaatcaaagca
gtataccttggcaagttgaaccaagttcttgttggatttaagagtctaaaaaaagatgag
tggttcttggaaaaaattgttataaaagaagtcctctaccctttttctgcacatgttttt
gttcacaacgactggatcaataaacactccaagaaagattttgtagaagtggcaattcca
ctcaaagaaacatccgtgacatctcttctcacaaaaaattttgatactaaaagcagagga
cgatggcaaatgtgggtgcactgtatgcaagtaccagaagatgttcctgatattcaagtt
gtcgtatttggaagaaaagggaaatcccctgcacagaaagttcagaatctgaacaataat
ccatttttactgactgttggtgatattggagatataacgaaagtttcctttgtgttatct
ggtccgtgcttgggaagaggaattaaacttcacaagcttcagctaaaagacctggacact
aagcaagagttgggctttcacactgaagcccaatgtctgtttggagaagatggatctgag
actgtgacagagctagcagcggtcaggccagacaagccaccactcagggaagttctttac
tcgatcagtgttcatacgggaacattgcctgcgtcagggactgatgcagatgtatttatc
acagtatttggagagcacggagattcctgcaaaaggagactaagacactcaaatttggaa
aggggacaggtttgtatctctgaaatgagagcagtggaccttggacagttaagcaaagtg
cttgttgagcaccataatgtgggttacggagctggatggtacctggaccaaattgtcatc
cgtgaatcaggcaagaccgatggccaatacgcatttctttgccagcaatggttagatagt
ggagttggtgatgcacagacagaacgaatgttgaaacttcttggaaaagtcaggaaagag
atattgacaggaaagatttatgggacttgggatgtccttgtgacaactggtgatatttct
tctagttccataaatcctaaaatgtctctaactgtatgtggtgaaaaaggtacctgtact
tcagtcatattccccaaaggatcccttaaaaaaaaggagacttatgagacttcagttgaa
ctaaataagaaattcaatactatattcaaagttcgcctagaaattgaagaagctggagaa
ggagagacttggcattgtcgtgaggtaacgcttcagcaccgagaaagcaaaaatgttcta
gaatttccattttatcgcgactttgcagatgaagaaggaggaagagtggctgagcttccg
gttctcacagctggctctccttttccagcagtgaaaagctatgttctctatatcactacg
ggagcaccccctgggtcaggaacagatgcagatgtgtatgtcatgctgcaaggccttttg
ggagatactggcagaagaaagttaatcagaaaaggggatgataatttcactaaaggaaag
gtggatgtttttcaagtggaagcagtagatgttgggactctgcagaggatggtggttgaa
aaagggaaaggctctgactggcttctagagaagattattgtgaaagagccagcagcttca
gggacagaaacattgtttatggctcaaacatggctaaaagacagccgcgacagaaaaaga
tctgcctcggtaactctgaatgccacagaaatacaggagaggaggagcccttctgcctgg
cctttaggaaaagagcaaatgaattcagaaggcagatggaggatttacttcacaaaacat
aaagaagaaacaaaaacagactttgaaaagttgtcagaaaatatatccaagttggttatg
gttttttatggaagcaacggcaagtcaaatccagtttccatggaaaacaaagtggaacat
caggctaagaaccaaataacatatgatatacatttaccatttgatttgggaacgctttat
aaagtgagacttggtctccagagtttggaaaatagcatatcccagttgtctcttcgtcac
ttcaaaatgcagaacacatcaaccctggatacctttagtcttaccataaataaatcactt
cctctttctcttaatggagacagatggattgaattccctgtagagtggccattaaaagaa
gcactttctgtggttacatatcatctaacagtattttctagaaatattttgagcgagaga
aatttattgcatatggctgcgtgtatatatggtactcatggtgacacaggggacagatcc
cttctctggtcgttgcagaatgtccagcagggagaggacaatgagtcatttgtagttact
gtggatgccgttgaattgggagaactggacaaagttgttcttttgatcagcagtaaaaca
gactgcaaagtggacattaaaaaattgcatttgaaagaagctgtaaaggagcatcctatc
tatgtatttgaagtgaatgaagcattttctgtgaatgcaaataagccagaaatagagaga
gaaatcccagtatcttttattatgagaggagacaaacaaaagaatgacatagataacaac
ttacataaagaaggaagtcaaacaagaagtctgacagagtatactattaaagtatacaca
ggtgaccaaaggggagcagggactgatgccaatgtgcatattatcttatttgggaatgag
gacaaatcggaggtatttcaactctctcagtcactggagcatcaagacccctttgaaaga
ggaaaggttgatacattcaagattaagacaaaaaaattaggcagcctacattcaattgaa
attggtcacgatgggaaaggatttgcaagtggctggtttctggaaaaagtagaaatcaca
gatgcatctaggaattcagtgtattgcttcagctgtaacaggtggcttgctgaggatgaa
agtgatggtcgcactgtagtgctactttatccacagctgcttgatttctga
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integrated database retrieval system
