Chroicocephalus ridibundus (black-headed gull): 134512032
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Entry
134512032 CDS
T10910
Symbol
VCPIP1
Name
(RefSeq) deubiquitinating protein VCPIP1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
crid01002
]
134512032 (VCPIP1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crid04121
]
134512032 (VCPIP1)
Enzymes [BR:
crid01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
134512032 (VCPIP1)
Peptidases and inhibitors [BR:
crid01002
]
Cysteine peptidases
Family C64
134512032 (VCPIP1)
Ubiquitin system [BR:
crid04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
134512032 (VCPIP1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
Motif
Other DBs
NCBI-GeneID:
134512032
NCBI-ProteinID:
XP_063183057
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All DBs
Position
2:complement(131576762..131593653)
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AA seq
1221 aa
AA seq
DB search
MSQPQQQQQPPPPPPPSPQQQPQPPPPAAAKKRDRRIFSGTCPDPKCQARLFFPAHGPQS
GGSIECTDCGQRHEQRQLLAVEEVTDPDLVLHNLLRNALLGVSGAGPPRRNTELVKVMGL
SNYHCKLLAPILARYGMDKQTGKAKLLTEMNQGDIFDCSLLGDRAFLIEPEHVETIGYGK
DRSGSLIYLHDTLEDIKKANNSQECLIPVHVDGDGHCLVHAVSRALVGRELFWHALRENL
KKHFEENLSHYKALFHDFIDAAEWEDIINECDPLFVPPEGVPMGLRNIHIFGLANVLHRP
IILLDSLSGMRSSGDYSATFLPGLVPLEKCMGKDGMLNKPICIAWSSSGRNHYIPLVGIK
GAALPKLPRKLLPKAWGVPQDLIKKYIKLEEDGGCVIGGDRSLQDKYLMRLVAAMEEVFM
SKHGIHPSLVADVHQYFYRRTGVIGVQPEEVTAAAKKAVMDNRLHRCLICGALSEHHVPP
EWLAPGGKLYNLAKSTHGQLRPDKNYSFPLNSLVCSYNPAKDVLVPDYNLSSLTACNWCH
GNLVRRVREDGSVSYLDGDRTNTRSTGGKCGCGFKHYWEGKEYDNLPEAFPITLEWGGRV
VRETVYWFQYESDTSLNSNVYDVAMKLVTKHFPGEFGSEILVQKVVNTILHQTAKKNPDD
YTPVNIDGAHAQRADDVQQGQELESQLPTKIILTGQKTKTLHKEELNMSKAERTIQQNIA
DQASVMQKRKSEKLKQEHKGQPRTASPGAVREGPSSAPATPTKTPYSPTSTKEKKIRITT
NDGRQSMLTLKCTTTFLELQESIAREFNIPPYLQCIRYGFPPKELLPPKEGMENEPVPLQ
HGDRIAIEILKGKEEGRQSASAHSARPVKHEDVAVTSKISSKELQEQVDKEMYSLCLLAT
LMGEDVWSYAKGLPQLFQQGGVFYSIMKKTTGLADGKHCTFPHLPGKNFVYNAAEDRLEL
CVDAAGHFPIGPDVEELVKEALSQVRAEATSRSREASPSHGMLKLGSGGVVKKKSEQLHN
ITAFQGKGHSLGTASSSQQHDQRARETPLLRKHSTETDFSPSAKIEPSVFTAASGNSELI
RIAPGVVTMRDSRQLDPTLIEAQRKKLQEMVSSIQASMDRHLRDQNTEQSASVDLSPRKV
EAASSTAKTGSFQAGLPESFSAPGGTEHLNTESTDGNVVNSVGTTFPARSKAQKGNSVEE
LEEMDSQDAGITNTTEPMDHS
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagccgcagcagcagcaacagccgccgccgccgccgccaccgtcgcctcagcag
cagccgcagccgccgccaccggcagccgccaagaagcgggaccggcgcatcttctccggc
acctgccccgaccccaaatgccaggcgcggctcttcttcccggcccacgggccgcagagc
ggcggcagcatcgagtgcacggactgcgggcagcgccacgagcagcggcagctgctggcc
gtggaggaggtgaccgaccccgacctggtgctgcacaacctgctgcggaacgcgctgctg
ggcgtcagcggcgccggccccccccgcaggaacaccgagctcgtcaaagtcatgggcctc
tccaactaccactgcaagctcctggcccccatcctggcccgctacggtatggataagcag
actggcaaagccaagctcctcacggagatgaaccagggagacatctttgactgctccctc
ttgggtgaccgcgccttcctcattgagcccgagcacgttgaaaccatcggttatgggaag
gaccgctccggcagcctcatctacctgcacgacaccttggaagacatcaagaaggccaac
aacagtcaggagtgcctcattcctgtccatgtggatggagatggccactgcctcgtccac
gcggtctcacgggcgcttgttggcagagaactgttctggcatgctctgcgagagaatcta
aagaagcattttgaggagaatctgagtcactacaaggcgcttttccatgactttattgat
gcagcagagtgggaggacattatcaatgaatgtgaccctttgtttgttcctccagaaggt
gtgccaatgggccttaggaatattcacatctttgggctggccaacgtgcttcaccggcct
atcatcctgttagattcattaagtggaatgcgaagctctggagattattcagcgacgttc
ctccctggtctggtacccctagaaaaatgcatgggaaaagatggcatgttgaacaagcca
atctgcattgcgtggagtagctcaggacgtaaccattatattcctctagttggaataaaa
ggtgctgctttacctaaactgcctaggaagctacttcctaaagcctggggagttcctcaa
gacctcatcaaaaagtacatcaagttagaggaggacggtggttgtgtcattggaggagac
agaagtttgcaagataagtacttgatgaggctcgttgctgcgatggaggaggttttcatg
agtaaacacggtatccaccccagtcttgtagctgatgtacatcagtatttctacagaagg
actggtgtaataggagtccagcctgaagaagtcaccgcagctgccaaaaaagcagtgatg
gacaaccgccttcacaggtgcctcatctgcggggccctttctgagcatcatgttcctcca
gagtggctggctcctggggggaaactctacaacctggcaaaaagtacccatggccaacta
aggcctgacaaaaattacagttttcccctgaacagtttggtgtgttcttacaaccccgca
aaggatgtgctggtaccagactataacctgagtagtttgactgcttgtaactggtgtcat
ggtaacctggtgcgtcgtgtcagagaagatggatctgtttcgtatttggacggagacaga
actaataccaggtctacaggtggtaaatgtggctgtggattcaagcactactgggaaggt
aaagaatatgataatctccctgaagcttttcctattactctggagtggggtggaagagtg
gtgagagagacagtgtactggttccagtatgaaagcgacacatctctgaacagcaatgtg
tatgatgtcgccatgaaacttgttaccaagcacttccctggtgaatttggtagtgagatt
cttgttcagaaagttgtcaacacaatattgcatcaaactgccaaaaagaaccctgatgat
tatacccctgtaaatatcgatggtgctcacgcccaaagagctgatgatgtgcagcaagga
caagagttagagtcacaacttccaaccaaaattattttgactggacagaagacaaaaact
ttgcacaaggaggaactgaatatgagcaaagctgaaagaactattcagcagaacattgca
gaccaggcttctgtaatgcaaaaacggaaaagtgaaaaattgaaacaagagcataaaggc
caacctaggactgcttctcccggggctgttcgagaggggccatcatctgcacctgctaca
ccaacaaaaaccccgtattctccaacatctacaaaagaaaagaaaattcgaataacgaca
aatgatgggaggcagtcaatgcttaccctaaagtgcactaccaccttcttggaactacag
gaaagcatagcaagagaatttaatattcctccgtatttgcaatgcattcgctatggcttt
cctcctaaagagcttctgcctcccaaagaaggcatggaaaatgagcccgttcctttgcag
catggtgacaggattgcgatagaaatcctgaaaggtaaggaggaaggcaggcagtctgct
tcagcacactctgcccgtcccgtgaagcatgaagatgttgctgtgactagtaaaatctca
tcgaaggaactgcaagagcaagttgataaggagatgtattctctctgtcttctagcaaca
ttaatgggagaagatgtttggtcttacgcaaaggggcttccccaattgtttcagcagggt
ggagtgttctacagcataatgaagaaaaccacaggtttggctgatggcaagcactgtact
tttccacatctgcctggtaaaaactttgtgtacaatgcagcagaagacagattagagctg
tgtgtggatgctgctgggcactttcctattggtcctgatgttgaagagttggttaaagag
gccttaagtcaagtgcgagcagaagctacttcaagaagccgggaagcaagtccttcacat
ggaatgctgaagctgggtagcggtggagtagtgaaaaagaaatctgaacaactacataac
ataactgcgtttcaaggaaagggccattccctaggaactgcatccagtagtcaacagcat
gatcaaagagccagggaaacaccacttttaagaaagcatagcacagaaacggacttcagt
ccttctgctaaaattgagccttctgtattcacagctgcctctggtaacagtgagcttatc
cgaattgcgccgggagttgtgacaatgagagacagcaggcagcttgaccccactttgatt
gaggcacagagaaaaaagttgcaggaaatggtctcttctattcaggcttccatggataga
catttgcgggatcagaatacagagcagtcagcatcagttgatctatctccaagaaaagta
gaggcagcgagttcaactgctaaaactgggagctttcaggctggcttgcccgaatcgttc
tctgcaccaggtggtactgaacacttgaataccgaatcaactgatggtaatgtggtgaat
tctgtgggaacaacattccctgcaaggtctaaagcacaaaagggaaattctgttgaggag
cttgaggagatggatagtcaagatgcaggaatcactaatacaactgagccaatggatcac
tcttga
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