Chroicocephalus ridibundus (black-headed gull): 134512153
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Entry
134512153 CDS
T10910
Symbol
POP1
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
134512153 (POP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crid03009
]
134512153 (POP1)
03016 Transfer RNA biogenesis [BR:
crid03016
]
134512153 (POP1)
03029 Mitochondrial biogenesis [BR:
crid03029
]
134512153 (POP1)
Enzymes [BR:
crid01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
134512153 (POP1)
Ribosome biogenesis [BR:
crid03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
134512153 (POP1)
Transfer RNA biogenesis [BR:
crid03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
134512153 (POP1)
Mitochondrial biogenesis [BR:
crid03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
134512153 (POP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POP1_C
POP1_N
POPLD
Motif
Other DBs
NCBI-GeneID:
134512153
NCBI-ProteinID:
XP_063183327
LinkDB
All DBs
Position
2:144995084..145018880
Genome browser
AA seq
1010 aa
AA seq
DB search
MSGAKEKKRAKKMRNQPASVTLPAEPGPFPDGGSRACLPPGDIHCEQQYQQQKFSNQSSG
PSYRKDQYFPKGQNRGERGRGRGGWQGGRQSVSEEIPKYITVSAFAQARAAEINAMLKAV
AQKSSNSLVFQTLPRHMRRRAMSHNIKRLPRRLQEIAKKEAEKAVHQKKEQSKTKCRKAR
RRHINLVAEFNRRQRKNIWLETHIWHAKRFHMVKKWGYCLGDSPTEKCYRACYRAMTNHC
LLQDLSYYCCLELTGKENELLKQLARICSIDTGLTFEEACCLSGRFEGSLNLYQADRYPE
DMLGPVTFIWKPRGVSENRQLWIWMHPALKQDILRELKAIFQCTEPQDIYIPEPVTTSIQ
EEKQMDVVLSLGKKRKKEDKEGERAVPVKKIIGDGTRDPFQSYSWISQTTGIVISDRTME
ILRYRLIGPLSHSILTGTLKAASLQTEMADSETELNNWWVENCKDSEKVSLHQRQSAIFE
LLEGISSPSELPPGTILGLTVGDPRVNLPKKKTKAMPDFEKYQDNDKVRQLYLEGVPVDC
AHSFIWDQDICKNVTENKISEQDLNHMRAQLLVPGSHLDLGPRESKIPILLVQQPGKMAG
EDLPGWGSGWDIYLPKGWGMAFWIPFIYQGVRVGGLQEALKHSEYQRTPHTPNDFPDCQA
GKQFAKELETSLLEKFKRRPPAKRANYVKLGTLSPFICPWGQLTKNWEGRMKASGESVHS
PHAECCATEDHRFCDPKAEVVKEASSETGEIEETVGITSSEAVLKTDGVTGAQDFGERDE
SMTTSDFIVLRSEKLLKQLSAWCYPTAGKDRRVRLISRLGQKEMTQDVFLPILMSYPRAL
VWVKLTLLRKGNPELHAMICIPTEDDLLHLSKDKLFCGPQEPTHHDIFKHKVQKLKEEKK
KKKKDNTKGLESDPLSVPDKETTEEHEDLILGLWSDVLPDVTSHCSRTLLGYVSRGDFSL
AVGCGEALGFVSLTGLLYMLHNQPADKKGLVLLRTPASLQYRFARLNIEV
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtgcgaaggagaagaagcgggccaagaagatgaggaaccagccggccagcgtc
acgcttcccgctgagccggggcccttccccgacggcgggagcagagcctgcctgccccca
ggagacattcattgtgagcagcagtatcagcagcagaaattttcaaaccagtcatctggg
ccttcttacaggaaagaccagtattttccaaaagggcaaaatagaggagagagagggaga
ggaagaggaggatggcaaggaggacgccagagtgtttctgaggaaataccaaaatacata
acagtgtctgcctttgctcaagctcgtgctgctgagatcaatgccatgttgaaagcagtt
gcgcagaagtcttcaaactctttggttttccagactctacctaggcacatgcgaaggcga
gctatgagtcacaatattaaacgactacccaggcggctccaagagattgccaagaaagag
gcagagaaagctgtacatcagaaaaaagaacagtcgaagactaaatgccgcaaagctaga
aggcgccacataaatttggtagcagagtttaatcgtaggcaaagaaagaatatttggctg
gaaacgcatatttggcacgcaaagagatttcatatggtaaagaaatggggatattgttta
ggagatagccctacggagaagtgctacagggcttgttaccgagccatgacaaaccactgc
cttcttcaggacttatcatattattgttgcctggagttgactggtaaagagaatgaactt
ctgaagcaacttgctcgaatatgtagcattgacacaggattaacatttgaagaggcttgt
tgtctgtctggaagattcgagggttccctgaatctttaccaagcagatcgctatcctgag
gatatgcttggtcccgttacatttatttggaaacccaggggtgtctctgaaaacagacag
ttatggatctggatgcatccagctctcaaacaggacatactgagagagttaaaagcaatt
tttcagtgtacagagcctcaagacatctatattcctgagcctgttacaacatcaattcaa
gaggaaaaacaaatggatgttgttctcagccttggcaagaaaaggaagaaggaggataaa
gaaggagaaagagctgtgccagtgaaaaaaataattggtgatggcactagagatccattc
cagtcctactcttggatctcgcagactactggcattgtgatcagtgatagaactatggag
attctcagataccgtctgattggcccattatcacactccatccttacagggaccttgaaa
gctgcttctctccaaacagagatggcagattcagagacagaactgaataactggtgggta
gaaaactgcaaggactctgaaaaagtatctcttcatcaacgtcaaagcgcaatctttgag
ctattagaagggataagttcgccatcagaattgccaccaggtacaatactgggcctcact
gttggagatcctcgagtgaatttgccaaaaaagaagacaaaagccatgccagactttgaa
aaataccaagataatgataaagttaggcagctgtacctggagggtgtgcctgtagactgt
gctcacagctttatctgggaccaggacatctgtaagaacgtcactgaaaataaaatctca
gagcaggatttaaaccatatgagagctcagttactggtacctggatcacaccttgatttg
ggccctcgtgaatctaagattcccatactgttggtgcagcagccagggaaaatggctgga
gaagatctaccaggatgggggagcggctgggatatctatctcccaaagggctggggcatg
gccttctggattccttttatatatcaaggtgtacgagttggtggcttgcaagaggcttta
aagcattctgagtatcaaagaacacctcacactccaaatgatttcccagactgccaggca
ggaaagcagtttgccaaagaactggaaaccagtcttcttgaaaaattcaaacgacgtcca
cctgcaaaaagggcaaattatgtcaagctgggcactctgtcccctttcatctgtccttgg
ggacagctgacgaagaactgggaagggagaatgaaagcttcaggagaatctgtacattcc
ccacacgctgagtgctgtgcaactgaagaccaccgcttttgtgaccccaaagcagaagtg
gtcaaagaagcttcctctgagactggtgagatagaggagactgttggaataacaagctct
gaagctgtcctaaagacagatggtgttacaggcgcccaagactttggtgagagagatgaa
tctatgacaacaagtgactttattgttctcaggagtgagaaactactaaagcagttatca
gcctggtgctatcccactgctggaaaagatcggcgagtccgccttatttctcgactggga
cagaaggaaatgactcaagatgtctttttgccaatcttgatgagctacccaagggctctt
gtatgggtcaagttgaccctcttgagaaaggggaacccagagttacatgccatgatttgc
atcccaacagaagatgacttgctgcatctaagcaaagacaaactcttctgtggtcctcag
gaacccacacatcatgacatattcaagcataaggtacagaagctaaaagaggagaaaaag
aagaagaaaaaggataacacaaagggtctagaaagtgaccccctgagcgttccagataaa
gaaacaactgaggaacatgaagacctcattcttggtctttggtcagatgttctcccagat
gttacttcccactgttcgagaactctcttgggatatgtcagtcgaggggatttttcgttg
gctgtgggctgtggagaagcactgggttttgttagcttgacggggttactttatatgtta
cacaaccagccagcagataaaaaagggcttgttttgttaagaactccagcatctttacag
tacagatttgcaagacttaatattgaggtttaa
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