Chroicocephalus ridibundus (black-headed gull): 134512338
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Entry
134512338 CDS
T10910
Symbol
SCRIB
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
134512338 (SCRIB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_14
LRR_8
LRR_4
PDZ_2
LRR_13
LRR_LRWD1
LRR_9
Motif
Other DBs
NCBI-GeneID:
134512338
NCBI-ProteinID:
XP_063183811
LinkDB
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Position
2:169905215..170023298
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AA seq
1991 aa
AA seq
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MLRCMPPLWRCNRHVEALDRRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLL
NLRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKSLEIADFSGNPLSR
LPEGFTQLRSLGHLALNDVSLQSLPNDIGNLANLVTLELRENLLKTLPTSLSFLVKLEQL
DLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENKLEQLPNEV
SGLVALTDLLLSQNLLECIPDGIGQLKQLSILKVDQNRLTEVTESIGDCENLSELILTEN
MLTALPKSLGKLAKLTNLNVDRNRLTSLPAEIGGCANLNVLSLRDNRLALLPPELANTTE
LHVLDVAGNRLQNLPFALTNLNLKALWLAENQSQPMLKFQTEDDEKTGEKVLTCYLLPQQ
PSPSLENLLQNSVDESWTDTNLNRVSVIQFLDEPKADDEEESGAERRGLQRRATPHPSEL
KVMKKVIEVRRNEVHAAKPDADLNSPNSEEKRLSAMSNRSEDSHLSNSTASADFRGEEQG
EEGERSWTNGQVLEMQELEKEAKPRAEEEHKEAADHEEEDAEVEYNEPTVHFAEDTLIRS
EDEDEDEERPFPVEKQRLIRKDTPHYKKHFKITKLPKPEAVVALLQGLNSDGVPKEEEEL
GGCNNNTESADQEEAWDEDDRKNGALSAQPSVKGVSFDQANNLLIEPARIEEEELTLTIV
RQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVSLHCAE
HHVAVEALRGSGSSVSMTVLRERMVEPENAITVTPLRPEDDYSPRERRGGLRFPERPEGA
PPTERYSTCLMRNEKGLGFSIAGGKGSTPYRAGDMGIFISRIAEGGAAHRDGILHVGDRV
ISINGVDMTEARHDQAVALLTASSPTIVLLVEREGAEQLGEGDSPGVPRARMHSPPPPPS
HGESPPEETPSLQRNHLSKGLEDQYPIEEIHLVKAGGPLGLSIVGGSDHSSHPFGIHEPG
VFISKVIPRGLASRSGLRVGDRILEVNSIDLRHATHQEAVNALLSNSQELTMLVRRDPPP
PGMQEICIEKAPGEKLGISIRGGAKGHAGNPFDPTDEGIFISKVSSSGAAARDGRLKVGM
RILEVNHQSLLGMTHTEAVQILRSVGDALLVLVCDGFDPKAAAAIEMSPGIIANPFAAGI
GRKNSLESISSIDRDLSPEELEILQKEMEMVREATQWEREEMEKVEWMRREREAATQQLE
EEAENATSEPLRLDYRTLAALPSSGLQRVNRTLVQYNKASSRMEGDCALLSLPVAQDSRD
SCPDTAASPIIGSVAGPPQDPAPPDQCASGAEKPQLDKQDPTGGPLSQDQMPKTPEQECM
IDSQPILFSENPFVVANRKGKAAGKACLGGPPLGYGRGGVLKTNLYSKAPAGESGTGNSR
RETPYSPSNQQTPAAPRPAHLPGRETRFASINFITSQDDSKSQTKPGVIQPLSRVRQNAA
PHNSEDGDSPNPFQQPELCFNIQNSQKPPSPPSPDEIPINVKQAYKTFAAVPLSHPLLET
QELPGQTSSENPKTAPEVAAHSPGGLHSPEQRSFRERQKYFEIEVKQQQMDKPPKRVSLV
GEDDLKKMKEEEARKLQQKRTLLLEEEAEEDEMVKQVPEMSMQSSVIIEGVEYKIERLNG
RSSQSPATRTSEVNENSSSQRNSLEEGIKPEQRTNSVSGLSPLYLGAGDPVAPVRTAKAE
RRHQERLRMQSPELLSGQEKELSPAERRALEAEKRAMWRAARSSALEDSIKQYEQDLARK
LYQSRQWAPAPGARPAQMSSPRQSHASRLPGSGSQSRMKSLEQDALKAQMVIAKSKEGKK
RSTLEQLAESPSPVPTPSPTPLEDCSPRNVTSPGRLSMSEKKFDYREFAAIPSSKPVYEI
QSPDAADDLRYTDDRNNSVPQEQDGQPEEEEMLVTRDSSTPTSSALEEMALYSSKRKLRH
SRRSLEAAVPT
NT seq
5976 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggtgcatgccgccgctctggcgctgcaaccggcacgtggaggcgctggaccgg
cggcactgctcgctgcaggccgtgcccgaggagatctaccgctacagccggtcgctggag
gagctgctgctggacgccaaccagctgcgggagctgcccaagcctttctttaggcttctg
aacctgcgcaagctgggtctgagtgacaatgaaatccagagacttccccccgaggttgcc
aacttcatgcagctggtggaactggacatctcccgtaatgacattccagaaattcctgaa
agcatcaaattctgcaaatccctggaaatcgcagactttagtgggaatcctctctccagg
cttccagagggcttcacgcagcttcggagcctgggccatttggccttgaatgatgtgtcc
ctgcagagcctccccaatgacattgggaatttggcaaacctggtgactttggagctacgt
gagaacctgctaaagactctccccacttcgctctccttccttgtcaagttagaacagttg
gatcttggtggcaatgacctggaagtactgccagatactctgggagcgctaccaaacctg
cgtgagctttggttagaccggaaccagctttcagccctgcctccagagctgggcaacctc
cgccgcttggtctgcctggatgtgtcagagaacaagctggagcagttgcccaatgaggtc
agtgggctagtagcactgacggacttgctcctgtcacagaacctgttggaatgcattccg
gatgggattggtcagctgaagcagctctccatcctcaaggtggaccagaatcggctgaca
gaggtgacagagtcaattggggactgtgaaaatctgtcagaactcatcttgacagagaac
atgctgacagctttgccaaagtcccttggcaagctggccaagctgacgaacctgaatgtg
gatcggaaccggctaacatcccttccagctgagattggaggctgtgccaatctgaatgtg
ctgtccttgcgagacaatcgcctggcgctcctgccaccagagctggccaacaccacagag
cttcatgtcctggatgtggccgggaacagactgcagaacttgccatttgctttgacaaat
cttaacctgaaagccctgtggctggcagaaaatcagtcccagcccatgctgaaattccaa
acggaggatgatgaaaagacaggagaaaaagttctcacttgttacctgcttccccagcag
ccctctcccagcctagagaatcttttgcagaacagtgtggatgagagctggacagacacc
aatttaaacagggtcagtgtgattcagttcctggatgaacccaaagcggacgatgaagag
gagtctggagctgagagacggggcttacagcgcagagcaacccctcatcccagtgaactg
aaggttatgaagaaagtgattgaagttcggcgcaatgaggtacacgctgcaaagcctgat
gcagacctgaactctcctaactcagaagagaagaggctgagcgccatgtcaaatcgcagc
gaggactcccacctttccaacagcactgcctctgctgactttaggggagaggagcaggga
gaggagggagagaggagctggacaaatgggcaggtgctggagatgcaggagctggagaag
gaggcaaagcccagagctgaagaggagcataaggaagctgctgaccatgaagaggaagat
gcagaggtggaatacaatgagcccactgtacactttgctgaggacacactaatacggagt
gaggatgaggatgaagacgaagagcgaccgttcccagtggagaaacagaggcttatccgc
aaggacacgccccattataagaaacactttaagataactaaactgccgaagccagaggca
gtggtggcactcctgcagggcttgaacagtgatggagttcccaaagaggaagaggagtta
ggaggctgcaataacaacacagagtccgcagatcaggaggaagcatgggatgaggatgac
agaaaaaacggagctttatctgctcagccatcggtgaagggggtgtcgtttgatcaagcc
aataatctgctgattgaacctgctcgcattgaggaggaagagttgactctgactatcgtg
cggcagacgggggggctgggcatcagcatcgcagggggcaagggctccaccccctataag
ggcgacgatgagggcatctttatttcccgtgtgtcagaagagggtcctgcagctcgtgca
ggggttcgtgttggggacaagcttctggaggtgaacggcgtgtccctgcactgtgctgag
catcacgtggcagtggaagctctgcgtggatcgggaagctctgtctccatgactgttctg
cgggagcggatggtggagccggagaacgccatcactgtcacaccgctgcgccctgaggat
gactacagccctcgtgagaggcgaggtggtctacgctttccagagcgacccgagggggca
cctcccacagagagatattccacctgcctcatgcgcaacgagaagggcctgggcttcagc
atcgctggtggcaaaggctccacaccctaccgggctggtgacatggggatctttatctca
cggattgcagagggtggcgcagcccatcgggacgggatcctgcacgtaggagatcgggtc
atctcgatcaatggggtagacatgacagaagccaggcatgatcaggcagtagcgctgctt
accgcatcctcccccaccatcgtgctgctggtagagagagagggtgcagagcagctcggc
gagggagactcgccaggcgtgccacgggcacgcatgcactccccaccgccacctcccagc
catggggagagcccgccggaggagacgccttccctgcagaggaaccatctgtctaaaggc
ctggaggatcaatatcccattgaggaaattcaccttgtaaaagcaggtggtcctctggga
ctcagcattgtaggaggcagtgaccattcaagccatccgtttgggattcatgaaccgggt
gtcttcatttcaaaggtcattccccgtggactggcgtctcgcagtgggctccgtgtaggg
gacaggatcctggaggtcaatagtattgacctgcgccatgccacccaccaggaagcagtg
aatgccctgctctccaacagccaggagctgactatgttagtaaggcgagatccgccacca
cctggtatgcaggaaatatgcattgaaaaggctccaggagaaaagctgggcatcagcatc
cggggtggagcaaaaggtcatgctggaaatccctttgatcccaccgatgaaggcatcttc
atttctaaggtgagctcctctggggctgcggcccgggatggccgtctgaaggtgggaatg
cggatcttggaggtgaaccaccagagtttgctgggaatgacgcacacggaagcagtgcag
atactccgcagtgtgggcgacgcgctccttgtgctggtgtgcgatggcttcgaccccaag
gctgcagctgccattgagatgtccccaggaattattgcaaacccttttgctgctggtatc
gggcgcaagaatagcctggaaagtatctcttctattgatcgggatttaagccctgaggaa
ctggagatcctacagaaggagatggaaatggtgagagaagcaactcagtgggagagagaa
gaaatggagaaagtggagtggatgcgtagggagcgggaggcagccacacagcagcttgag
gaggaggcagagaatgccaccagcgaacctttgagactggactatcggaccctggctgct
ttgcccagcagtggcttacagagagtcaatcgcactcttgttcagtataataaggccagc
tccagaatggagggcgactgcgctctgctgtctctgccggtggcacaggacagccgggat
tcatgccccgatacagccgccagccccatcatcggaagcgtggctggccctcctcaggac
cctgctccacctgaccagtgcgccagcggggcagaaaagccccagttggacaagcaggat
cccacgggtggccccttgtcccaggaccagatgccaaagacgccagagcaagagtgcatg
atcgactcccagcccatcctcttcagtgagaacccctttgtggtggcaaaccgcaagggg
aaggcagcaggcaaggcctgcctgggggggccgcccctgggctatggcagggggggagtg
ctgaagaccaacctttactccaaggctcctgcgggcgagtctgggacaggaaattccagg
cgtgaaaccccctattctcctagtaatcagcagacgcccgcagcccctcggcctgctcac
ctgccaggcagggagacccgctttgcttccattaacttcatcacatcgcaggatgacagt
aaatcacagaccaagccaggcgtcattcagcctctttcccgagtgcgacaaaatgctgcc
ccacataattcggaggacggggacagccccaatcccttccagcaacctgagctgtgcttc
aatatccagaactctcaaaagccaccttcaccaccctctcctgatgagatccccatcaac
gtcaagcaagcatacaagacctttgcagcagtgcccttgtcacaccctctgcttgagaca
caggaattgcctggtcagaccagctcagagaatcccaaaactgctccagaggtggcagcg
cacagccccggaggactgcacagccctgagcagaggtccttccgcgagaggcaaaagtat
ttcgaaattgaggtgaagcagcagcagatggataagccccccaagcgagtctccttggta
ggagaggatgacctgaagaaaatgaaagaagaggaagctcgaaaactgcagcagaaacgt
acccttctgttggaggaagaggcagaagaggatgagatggtaaaacaggtgcctgagatg
agcatgcagtccagtgtcatcattgaaggagtcgagtacaagattgagagactaaatgga
aggagcagccagtctccagcaactcggacctctgaggtgaatgagaacagcagctcacag
aggaattcactggaagagggaatcaagcctgaacagagaaccaactctgtgtctgggttg
agtccattatatcttggagcaggggatccagtggcacctgtgcggacagccaaagctgaa
cggcgacaccaggagcgattgcgaatgcagagtcctgagcttctgagtggccaagagaag
gagctttctccagcagaacgtcgtgctctggaggcagagaaacgagcaatgtggagggca
gcacgatcctcagctcttgaagacagtattaaacagtacgagcaggatctggccaggaag
ctgtaccagtcccgacagtgggcacctgctcccggggccaggccagctcagatgtctagt
ccaaggcagagtcacgcctcaagactccctgggtcaggaagccaatccaggatgaaatca
cttgaacaggatgctcttaaagcccaaatggttattgccaagtccaaggaggggaaaaaa
cgcagcacactggagcagctggcagagtcaccttcgcctgttcctactccatcaccgaca
ccactggaagattgcagtcccagaaacgtcacttcaccaggaaggctgtccatgtctgaa
aagaagtttgactaccgggaatttgctgctattccttcctccaaacctgtttacgaaatc
cagtcccctgatgcagctgatgacctcagatacacagatgacagaaataactcagttccc
caggagcaggatgggcagcccgaggaagaggaaatgttagtaacacgtgattcatcaaca
cctacttcatccgcgcttgaagagatggccctgtacagcagcaaacgcaagctccggcac
agccggcgcagtttggaggctgccgtccctacgtag
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