Chroicocephalus ridibundus (black-headed gull): 134512498
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Entry
134512498 CDS
T10910
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04517
IgSF CAM signaling
crid04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
134512498 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
134512498 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
crid04812
]
134512498 (SPTBN1)
Cytoskeleton proteins [BR:
crid04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
134512498 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
134512498 (SPTBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SLATT_6
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
134512498
NCBI-ProteinID:
XP_063183966
LinkDB
All DBs
Position
3:complement(9589291..9726319)
Genome browser
AA seq
2362 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELETENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSVVRLLSKHKAFEDEMSGRSGHFQQAIKEGEDMIAEEHFGSEKIRERIK
DIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIASYRPTIDSLHEQAKALPQEHAGSPDVQGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEKWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHESIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLEKIEKEGMQLIAEKPETEGVVKEKLTGLHQMWEELESTTQTKAQRLFDAN
KAELFTQSCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQ
SQARALSQEGKSTDEVDGKRLIVEKKFLELLEPLNERKANLLASKEIHQFNRDVEDEILW
VGERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSKNIITESSPNAE
AIQQRLADLQQLWNLLIEETEKRHKRLEESHRAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYA
GLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEILGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVR
QLQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVR
DLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARK
HYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLS
SREIGQSVDEVEKLIKRHEAFEKSAATWDERFAALERLTTLELLEVRRQQEEEERKRQPP
TPEPSPKVAEDADSQQQWDGTKGEQVSQNGLPSDQESPRVAETAETNEMVNGAAEQRTSS
KESSPVPSPTSDRKAKTAIQAQTAATLPAKTQEIPSAQMEGFLHRKHEWETHSKKASSRS
WHNVYCVINNQEMGFYKDSKAAASGIPYHNEIPVSLKEAVCEIAVDYKKKKHVFKLRLTD
GNEYLFQAKDDEEMNTWIQAITSAISSDKIEVSPTTQSTPASSRAQTLPASVTITSESSP
GKREKDKEKDKEKRFSLFGKKK
NT seq
7089 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaacagtagcgacagattatgacaatattgaaatccaacagcagtacagtgat
gtcaacaaccgctgggacgttgacgactgggacaacgaaaatagttctgctcgtctgttt
gaacgatcccgcatcaaggccctagctgatgagcgcgaggcagttcagaagaagactttc
acaaagtgggttaattcccacttggcacgcgtatcatgcagaattacagacctgtacact
gaccttcgcgatggaaggatgctcatcaaacttctggaagttctttcaggagagagactt
cctaaaccaactaagggaaggatgcgcatccattgcctggagaatgttgataaagccctc
caattcctgaaagagcaaagagtgcatctagaaaacatgggatctcatgatattgtggat
gggaatcacagactgacgcttggccttatttggactattatcctgagattccagatccaa
gatatcagtgttgaaactgaggacaacaaggagaagaaatctgctaaagatgctttgctt
ttgtggtgccagatgaagacagctggttaccccaatgtcaacattcacaactttaccaca
agctggagggacgggatggctttcaatgcactaatacataagcacaggcctgacctgatt
gattttgacaagctgaagaaatcaaatgcacactacaatctgcagaatgcttttaacctt
gcagagcaacaccttggtctcactaagctcctggaccctgaggatatcagtgttgatcat
cctgatgaaaagtcaatcatcacctatgtggtgacatattaccactacttctccaagatg
aaagctttagctgttgaaggaaaacgtattggaaaggtgcttgacaatgccattgaaacg
gagaagatgattgaaaaatacgaatcgctggcttctgaccttcttgagtggatcgagcaa
accattatcatccttaacaatcgcaaatttgccaactcgctagttggtgtgcaacagcag
ctacaggcattcaacacttatcgcacagtagagaaaccacccaaatttacagaaaaagga
aacctagaggtgctgctttttaccatccaaagcaaaatgagagccaacaatcagaaagta
tacatgccaagggagggcaaactcatctctgacattaacaaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcactgcgaaatgagctcatcagacaagagaaactg
gaacaacttgcacgcagatttgatcgcaaggcagctatgagagaaacttggctgagtgaa
aatcaacgtctcgtttctcaggataattttggctttgaccttccagcagtggaggccgca
acaaagaagcatgaggccattgaaacagatattgcagcatatgaagaacgagtccaggcc
gtggttgcggttgcaaaggagcttgagactgaaaattaccatgatatcaagcgcattact
gcaagaaaggacaatgttatacgcctatgggagtacctcctggagctgctcagggcacgg
agacagcggctggagatgaatcttggtctgcaaaagattttccaggaaatgctgtatatt
atggactggatggatgagatgaaggtgcttctgctgtctcaagactatggcaaacatttg
ttaggagttgaagacctgttgcagaaacatgctctggtggaagctgacattgctattcaa
gctgagagagtgagaggagtcaatgcatctgctcagaagtttgccaccgatggagaaggt
tacaaaccatgtgacccgcaagttatcagggaccgtgtcgctcacatggagttctgttac
caagagctctgccagctcgcagccgagcgccgggcccgcttggaggagtcccggcgcctc
tggaaattcttctgggaaatggctgaagaagagggttggatcagggagaaggaacagatc
ctgtcatctgatgactatgggaaggacctaaccagtgtcgtacgtctcttgagtaaacat
aaggcatttgaagacgaaatgagtggtcgtagtggccactttcagcaggcaataaaagaa
ggtgaagacatgattgcggaagagcattttgggtctgagaaaatcagagaaagaattaag
gatatccgggagcagtgggctaacttggaacagttatctgccattaggaagaagcgtctg
gaggaagcctctctccttcaccagttccaggctgacgctgacgacattgatgcatggatg
ttggacatcctcaaaattgtctccagcaatgatgttggccatgatgaatattccactcaa
tccttggtcaagaaacacaaagacgtggctgaagagattgcaagctaccggccaactatt
gactcgcttcatgaacaagcaaaggccctaccacaggaacacgccggatctccagatgtg
caaggcagattgtccggaatagaggaaagatacaaagaggttgctgagctgactcggctg
cgtaaacaggccttgcaggatacccttgctctttataagatgttcagcgaggcagatgct
tgtgagctttggattgacgaaaaggagaagtggctgaataatatgcagattccagagaag
ctggaggacctggaagtgatccagcacaggtttgaaagcttagaaccagaaatgaacaat
caggcatcccgtgttgcagtagtgaaccaaattgctagacagctaatgcacagcggccat
ccaagtgagaaggagataaaagcacagcaagataaactcaacacaagatggagccagttc
agagaactggtagataggaagaaggatgctctgctctctgctctgagtatccagaactac
catcttgagtgtaatgaaaccaaatcttggatcagggaaaagaccaaagtgattgaatcc
acgcaagatttgggtaatgatctagctggagtgatggccctgcagaggaagctgacgggc
atggaacgtgatctggtagccattgaagccaagctaagcgacctgcaaaaagaggcagaa
aagctggaatcagagcatcctgaccaggcacaagccatcctttcacggctcgcagaaatc
aacgatgtatgggaagaaatgaagaccaccctcaagaatcgggaagagtccctcggagag
gcaagcaaactgcagcagttcctgagagatctggatgacttccagtcttggctatccaga
acgcagactgcaattgcatccgaagatatgccaaacacactgacggaggctgagaagctg
ctcactcaacatgagagtattaagaatgaaatcaacaattatgaggaagattatcagaaa
atgagggacatgggtgagatggtgacacaagggcaaactgacgctcagtacatgttctta
cgccagcgcctacaggctttggacactggatggaatgagcttcacaaaatgtgggagaac
aggcaaaatctcctttcccagtcgcatgcctaccagctatttctcagagataccaagcaa
gcagaagcatttcttaataaccaggagtatgttttggcacacacagaaatgcccactacc
ttggaaggagcagaagccgctattaaaaaacaggaggatttcatgaccacaatggatgcc
aatgaagaaaagatcaatgcagttgtagagactggccggaggctagttagcgacgggaac
attaactctgataaaatccaggagaaagtggactctattgatgacagacataggaagaac
cgtgaagcagccagtgaacttctgatgagactgaaagataaccgggatcttcaaaagttt
cttcaggattgtcaagagctctcgctctggatcaatgaaaagatgctcacagcccaggat
atgtcctatgatgaggcaaggaacctgcatagcaagtggctgaagcatcaggcatttatg
gcagaacttgcatccaacaaagaatggctagagaagattgaaaaggagggaatgcagctc
attgcagagaaaccggagactgaaggtgtagtgaaagaaaagctgacaggtctccatcaa
atgtgggaagagcttgaatccactacccagacgaaagctcagcgtctctttgatgcaaac
aaggcggagctttttacccagagctgtgctgatttggataagtggctgaatggtttggag
agtcaaattcagtcggatgactacggaaaagatctcaccagcgtcaacatcctgttgaag
aagcagcagatgctagagaatcaaatggatgttcgtaagaaggagatagaggagctgcaa
agccaggcaagggctttaagtcaagaagggaagagtacagatgaagtagatggcaaacgc
cttattgtagaaaagaaatttttggaattattggaacctttgaatgaaagaaaggcgaac
ctgctggcctccaaagagatccaccagttcaatcgggatgtggaagatgaaattttgtgg
gtcggagaaaggatgcctatagctacatctactgatcatggacacaacctccagactgtg
cagctactgataaagaaaaatcagacccttcagaaagaaatccagggacatcagcctcgt
atcgatgacatttttgagaggagcaaaaacattatcacagagagtagccctaatgctgaa
gcaattcagcagagacttgcagacttgcagcagctgtggaatctcctaatcgaggagaca
gagaaacgccacaagcgcctagaggagtctcacagagcacagcagtattactttgatgct
gccgaggctgaggcatggatgagcgagcaagagctctacatgatgtcagaagagaaagcc
aaggatgaacagagtgcagtgtccatgctgaagaaacaccagattttggaacaagctgta
gaagactatgctgaaactgtgcatcagctttcaaagaccagcagaactttagtggcagat
aatcacccagaaagcgagcgtatcagcatgcgccagtccaaagtggataagctgtatgca
ggcctgaaggatcttgctgaagagaggcggggcaagctggatgagagacacaggctgttc
cagcttaaccgcgaggtggatgatctggagcaatggattgctgaaagggaggtggtggca
ggatcccacgagctgggacaggattacgaacatgtaacaatgctacaggagcgattccga
gaatttgcccgagacactggaaacatcggacaggagcgtgttgatactgttaaccacatg
gcagatgaactcatcaactctggacattcagatgctgcaacaattgcagagtggaaggat
ggactcaatgaggcctgggctgatctcctagagctcattgacacgagaacacaaattcta
gcagcctcttatgaactgcacaaattttaccacgatgccaaggagatcttgggacgtatt
caagacaaacataagaaactacctgaagagcttggtagagaccaaaacacagtggaaaca
ctacagagaatgcacacaacgtttgagcatgatatccaggcgcttggcacccaggtgaga
cagctgcaggaggatgccgcgcgccttcaggctgcctatgccggagacaaagccgatgac
atccagaaaagggaaaacgaggtcctagaagcatggaaggcactgttggatgcctgcgag
ggacgcagggtgagactggtggatacaggagacaaattccgtttcttcagcatggttcgt
gatctcatgctttggatggaagatgttatccgacagatagaagcccaagaaaagccaagg
gatgtttcatctgttgaactactaatgaacaatcaccagggtatcaaagcagaaatcgat
gcccgaaacgacagctttactacctgcattgagcttggcaaatctcttctggcaagaaaa
cactatgcatcagaggagatcaaggagaagctgctgcagctgacagaaaaaagaaaagaa
atgattgacaaatgggaagacagatgggagtggctgagactgattttggaggtacaccag
ttttcaagagatgcaagtgtcgcggaggcctggctgctgggacaggagccctacctgtcc
agtcgtgaaataggtcaaagtgttgacgaagtggaaaaattaattaagcggcatgaagca
tttgaaaaatccgcagctacttgggatgagagatttgcagcactggagagactgaccacg
ttggaactgctggaagtacgtcgacagcaagaggaagaggagaggaagagacagccgccc
actccagagccaagcccaaaggttgcagaggatgccgactcccagcagcaatgggatggg
acaaaaggagaacaggtttcccaaaacggtttgccatcagaccaggaatctccacgggtg
gcagaaactgcagaaacaaacgaaatggtcaatggagctgcagaacagaggacaagttca
aaagagtctagtcctgttccttctccaacgtcagaccgcaaagccaagaccgccattcag
gcacagactgctgctaccctaccagccaaaacacaagagattccttcagctcagatggag
ggcttcttacatcgcaaacacgaatgggagacacacagcaagaaagcctcgagcagatca
tggcataacgtgtattgtgtcataaacaaccaagagatgggtttctacaaggattcgaag
gctgctgcttctggcatcccctaccacaatgagattcctgtcagcttgaaagaagcagtc
tgtgaaatagcggtcgattataaaaagaaaaagcatgtgttcaagctaagattgactgat
ggcaacgaatacctcttccaagccaaagacgatgaggagatgaacacgtggattcaggcc
atcacgtcagctatctcttctgataaaatcgaagtgtccccgaccacccagagcactcca
gcctccagccgtgcccagaccctgcctgccagcgtcacaataaccagtgagtccagccct
ggcaagcgggagaaagacaaagagaaagacaaagagaaaagattcagcctttttggtaaa
aagaagtga
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integrated database retrieval system
