Chroicocephalus ridibundus (black-headed gull): 134512565
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Entry
134512565 CDS
T10910
Symbol
PEX6
Name
(RefSeq) peroxisome biogenesis factor 6 isoform X1
KO
K13339
peroxin-6
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
134512565 (PEX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crid04131
]
134512565 (PEX6)
Membrane trafficking [BR:
crid04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
134512565 (PEX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_16
AAA_lid_3
AAA_5
AAA_22
Mg_chelatase
nSTAND3
AAA_25
RuvB_N
Vps4_C
TsaE
DUF815
NPHP3_N
RNA_helicase
AAA_33
bpMoxR
PEX6_4th
TIP49
Parvo_NS1
AAA_28
IstB_IS21
AAA_14
AAA_24
Motif
Other DBs
NCBI-GeneID:
134512565
NCBI-ProteinID:
XP_063184081
LinkDB
All DBs
Position
3:11968360..11985230
Genome browser
AA seq
983 aa
AA seq
DB search
MAVAVLRPLEAPPAELAPVTALLLAPPPLCSALRGRGGSGEGLVLAVRPAGRGGAQAVLL
SAVALEAGGRRGAELWLRGALVRRLGLAAGRRVAVWPVRRPPPLAWVLLGAAGRAGRPAG
GAVLVRRGEALPGAGPGPGPLVLEARPALQGLLGNGTRTALAPPPPPPQREPAAGSAPCR
PRPAAPPLVSSFAAAGPGGEAAAVGLRAAPGGGAGGGAEVWVSRRGLLALGLFQGEWVRV
GAEGAARRHLAALLARPPAWEYPRAARRGPPDGAALLAPALAFNLGCDPAAAANLRLQRY
ERAGAADGKGSRSVLSVPPFAKELHLEIVCSPAYSARGGYDRLLYKHFKTPRLVQEGDIL
CVPTFGYAEFLEVNADKFLRWPELYFKARKILGMGEGEQSEGYLVDTQNTSVYLAGSTNS
AVPSAPAYNSHEFWSSLSPAGLSDVVKQLCDALRPHLNSPASALSAAGSVLLSGPSGSGK
LMAVRAVCSCLNLHLFKVDCVSLCSDTSGATEEKVQMAFTQAQQYHPCVLLLKDIEVLGR
DRDRLGEDARVIATLRQLLLDRDPSLSHAVLVIATTCKPQDVPTDVQTAFLHEVKIEAPS
EEQRRSMLSMLTAGLPLGKEVSLSKLARRTAGFVLGDFCALLSHSSRAACTRIQALSFPG
GLSEEVERDFCTAGFPVLEEDFSVALDQLHDAHSQAVRAPKIPSVSWQDVGGLQEVKKEI
LDTIQLPLEHPELLSLGLCRSGLLLYGPPGTGKTLLAKAVATTCAMTFLSVKGPELINMY
VGQSEENVRNVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLH
STREVFVIGATNRPDLLDPALLRPGRFDKLVYVGINEDRESQLQVLSAVTRKFKLDPSVN
LTTILEKCPAQLTGADIYALCSDAMMCAVKRKVEWIEEGLDTESSALILTMEDFLQAAAR
LQPSVSEQELLRYRLIQQKFAAC
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggtgctgcggccgctggaggccccgccggcggagctggcgccggtcacc
gcgctgctgctggctccgccgccgctctgctcggcgctgcgcgggcgaggcggcagcggt
gagggcctggtgctggcggtgcggccggcggggcgcggcggggcgcaggccgtgctgctg
agcgccgtggcgctggaggcggggggccggcggggcgccgagctgtggctgcgcggggcc
ttggtgcggcggctggggctagcggccggccggcgggtggccgtttggccggtgcgccgc
ccgccgccgctggcctgggtgctgctgggggcggcggggcgggcggggcggccggcgggc
ggcgcggtgctggtgcggcggggggaggcgctgccgggagcggggccggggccgggtccg
ctggtgctggaggcccggccggcgctccaggggttgctaggcaacggcacgcgcaccgcc
ctcgcgcccccgccgccgccgccccagcgcgagcccgccgccggcagcgccccctgccgg
ccgcgccccgccgctccccccctcgtctccagtttcgccgccgccgggcccggcggggag
gcggctgccgtggggctgcgggcggcccccggcggcggggcgggcggcggggcggaggtg
tgggtgagccggcgggggctgctggcgctggggctgttccagggggagtgggtgcgggtg
ggcgccgagggggcggcccgacgccacctggcggccctgctggcccggccgccggcctgg
gagtacccgcgggccgcccgccgcgggccgcccgacggcgccgccctgctggcccccgca
ctggccttcaacctgggctgcgaccccgccgccgccgccaacctccgcctgcagaggtac
gaacgggccggcgctgcagatggaaagggcagccggtccgtgctctccgtgccccccttc
gccaaggagctgcacctagagatcgtctgctcaccagcctacagcgcacgggggggctac
gaccgcctcctctacaagcacttcaaaacgccccggcttgtccaggagggagacatccta
tgtgttccaacatttggatatgccgagtttttagaagtaaatgcagacaaattcctaagg
tggccagagctttacttcaaagcgaggaaaatcttaggcatgggggaaggcgagcagtct
gaaggttacctggtggacacccagaacacctctgtctatctggcgggctcaacaaacagc
gctgtcccatctgccccagcctataacagccacgagttctggagcagtttgtctcctgct
ggactttctgatgttgtgaagcagctctgtgacgctcttcggcctcatctgaacagtccg
gcaagtgcactgagcgcggctggcagcgttctcctctcagggccaagcggcagcgggaaa
ctgatggctgtcagagctgtgtgtagctgcctcaacctccacctgttcaaggttgattgc
gttagtttgtgcagtgacaccagtggagccacagaggagaaagtacagatggccttcacc
caggcccagcaatatcatccgtgtgtgctcctgctgaaagacatcgaggtgcttggcaga
gaccgggacaggctaggagaggacgccagggtcatcgctactctgagacagctgctcctg
gacagagacccatcactgagccatgctgtcctggtgattgccacaacctgcaaaccccag
gatgttcctacagacgtgcagactgctttccttcacgaggtgaaaattgaagccccttca
gaagagcagaggaggtcaatgctgagcatgctgactgctggtctgcctctgggcaaagaa
gtgagcctgtccaagctggcccgcaggactgcaggttttgtgctgggagatttctgtgcc
ttgttgtcccacagcagccgggctgcttgtacccgcatccaggccttgagttttccaggc
ggactgagcgaggaagtggagagagatttttgcactgctgggttcccggtgcttgaggag
gattttagcgttgcgctggaccagctgcacgatgcccattcacaggcagtgagagccccg
aagataccgtccgtctcctggcaggatgttggtgggctccaggaggtgaagaaggaaatc
ctggacactatccagttgcccctggagcacccggagctgctgtcactgggtctgtgccgc
tctggtctgctgctgtatgggcctccagggacagggaagaccttgctggcaaaagccgtg
gcaaccacgtgcgccatgacgttccttagcgtgaaagggccagagctgatcaacatgtac
gttgggcaaagcgaggagaatgtgcgtaacgtatttgccagagccagggcagctgctcca
tgcattatcttctttgatgaactggattccctggcccccagtcgtgggcggagcggagat
tcagggggcgtcatggacagagttgtctcgcagctcctggctgagcttgatggccttcat
tccaccagagaggtatttgtcattggagctacgaacaggcctgacctcctggacccagct
ctgctccggccgggcaggttcgacaagctggtctatgtgggcataaacgaagaccgggag
tcgcagctgcaggtgctgagcgccgtcaccaggaagtttaaactggatccttccgtgaat
ctcaccaccatcctagaaaaatgcccggctcagctgacaggagcagacatctatgccctg
tgctcggatgccatgatgtgcgctgtcaaacgcaaggtggaatggatcgaggaagggctg
gacaccgagagctctgctctgatcctgaccatggaagacttcctgcaggctgctgcgagg
ttgcagccgtcagtctctgagcaggagttgctcaggtacagactcatccagcagaagttt
gctgcctgctaa
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