Chroicocephalus ridibundus (black-headed gull): 134512566
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Entry
134512566 CDS
T10910
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
134512566 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crid03021
]
134512566 (POLR1B)
Enzymes [BR:
crid01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
134512566 (POLR1B)
Transcription machinery [BR:
crid03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
134512566 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
PBP_GOBP
Motif
Other DBs
NCBI-GeneID:
134512566
NCBI-ProteinID:
XP_063184083
LinkDB
All DBs
Position
3:complement(11995622..12015650)
Genome browser
AA seq
1124 aa
AA seq
DB search
MAARGDGDPHRLRPRPPGSGGGARRDLAAAHIESFNYAVSEGVYRAVQDLLPLEFALKDR
RVSLAVVGVSITPPAVPAGTVCQERRVFPAECRGVRSTYRGRIAADISWSVNDVPQGTIK
HPLGYIPIMVKSKFCNLYNLSPKELMQHHEEEEEMGGYFIINGLEKVIRMLIMPRRNFPL
AMTRHKWKNRGPGFTEYGVVMHCVKDEHTAINMNLHYLENGCVMVNFIFQKELFFLPLGF
ALKALVNFPDYQIFEELVKEKESDTFYVNCVTEMMRAVVDAGCLTQQNVLEYLGKSFRVK
LNLPEWYSNEQAADFILNKCICIHLTNRTEKFYLLCMMTRKLYAFAKGECMEDNPDSLMN
QEVLTPGQLFLMFLKERLESWLQSVKFVLEKRAEKADININADSLVKAFGLATDLTKPFE
YLLATGNLRSKTGLGMLQDSGLCVVGDKLNFIRYLSHFRCVHRGAAFSQMRTTTVRKLLP
ESWGFLCPVDTPDGEPCGLMNHMTAVCEIVTEIVPVRDIPPLLCSLGVTPIDATPSKPYA
ECYRVVLDGSVVGWVERELAPEIAETLRRFKITQEKRFPARAEVVLIPMTGKPSLYPGLF
IFTTPCRMVRPVKNLFYGRNEWIGTLEQVFMNVASLESEVVPGTTTHQELFPHSILSVVA
NLIPFSDHNQSPRNMYQCQMGKQTMGFPVYNYKDRSDNKLYHLHTPQSPLVRPSMYDHYS
MDSYPVGTNSIVAVISYSGYDMEDAMIVNKSSWERGFAYGSVIKMESIDLSLKASRAGDN
LVFGIRPGDPNVMEKLDADGLPFVGSILQPGDPFYSFMNLNTGETFTVYYPNKEVGIVDN
VRLCSNDRGTGKFKKACITVRVPRNPTVGDKFASRHGQKGILSQLWPIEDMPFTENGMVP
DILFNPHGFPSRMTIGMLIESMAGKSAALHGVSYDATPFTFTEKDSALKYFGKTLVSAGY
NFFGTEKMYSGISGLELEAEIFVGVVYYQRLRHMVSDKFQVRTTGPRDSVTNQPIQGRNV
EGGIRFGEMERDALLAHGTSFLLQDRLFNCSDGSIAYVCTSCGSMTSPVLEKPPHSSSVT
SNRRYSCSVCSEVDAIEAVPVPHVFRYFVAELAAMNIKTKLQVE
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgcggcgacggggacccgcaccggctgcggccgaggccgccgggcagcggc
ggcggggcccggcgcgacctggccgccgcccacatcgagtccttcaactacgccgtcagc
gagggcgtctaccgcgccgtgcaggatctgttgccgctggagttcgcgctgaaggacaga
cgagtgtcgctagcggtggtgggggtgtccatcaccccccccgccgtgccggccgggacg
gtgtgccaggagcggagggtgttccccgccgagtgccgcggcgttcgcagcacctaccgc
ggcaggatcgccgctgacatcagctggtcagtgaatgatgtgccacaagggactattaaa
catcccctggggtatattccaatcatggtgaagtccaagttctgcaacctctacaatctt
tctccaaaagagctaatgcagcaccatgaggaggaagaggaaatgggtggctactttata
attaatggcttagaaaaagttattaggatgctgattatgcccaggcgaaatttccctctt
gcaatgacaagacataaatggaaaaacagaggccctggtttcacagagtacggagtagtg
atgcactgcgttaaggatgagcacactgcaataaatatgaatcttcactacttggaaaac
ggttgcgtcatggtgaatttcatttttcagaaagagttgttcttccttcccttgggattt
gctctgaaggcattagttaatttcccagactaccagatttttgaagagttggtcaaagaa
aaggaaagtgacaccttttatgtgaactgtgttactgagatgatgagagcagtagtggat
gctggctgtctgacacagcaaaacgtccttgaatacctgggaaagagtttcagagtaaaa
cttaaccttcctgagtggtacagcaatgaacaggctgcagatttcattttgaacaagtgt
atctgcatacacctgacaaacagaactgaaaagttctacctgctgtgcatgatgacccgg
aagctgtatgcttttgccaaaggggagtgcatggaggataatccagacagtctgatgaat
caagaagtgcttaccccgggacaacttttccttatgttcttaaaggagaggcttgaaagc
tggttgcaatctgttaagttcgttttggagaaaagagcagaaaaggccgatatcaacata
aatgcagacagcttggtgaaggcgttcggcctggcaacagaccttaccaagccatttgaa
tatcttcttgcaactggtaacctgcgatctaaaaccggcctgggcatgttacaggacagc
ggcctgtgtgtggtgggagacaagctgaatttcattcgctacctttcccactttcgctgc
gtacacagaggggcagcgttttcccagatgagaactacaactgtccgcaagctgctgccc
gaatcctgggggttcctctgccctgtggacaccccggatggagaaccctgtggtctgatg
aaccacatgacagctgtgtgtgaaatagtgaccgagatagtgcctgtgagagatattcca
cctttgttgtgttccctgggtgtcacccccattgatgcgacgccaagcaagccttatgcg
gagtgttacagagttgtgttggatggctctgtggtgggctgggtagagcgggagctggct
cctgagattgcagaaaccctccgccgtttcaagataacacaagagaagagatttcctgca
cgggcagaagtggtccttatcccaatgacaggaaaacccagtctgtatcctgggttgttc
atttttactaccccttgtcggatggtgcggcctgtcaaaaacctgttctatggaaggaat
gaatggattggtactctggaacaggtcttcatgaacgtggcctcgctggagtcggaggtg
gtgcctggcacaacaactcaccaggagctcttccctcacagcattctgagcgtggtggcc
aacctcatccccttctctgaccacaaccaaagtccgcgaaacatgtaccagtgccagatg
ggaaagcaaaccatggggtttccggtttataactacaaggaccgctcagataacaagctg
taccaccttcacactccccagagccctctggtgcggcccagcatgtatgaccattacagt
atggacagctatccagtcggcaccaattcaattgtggctgtcatctcctacagcggctat
gacatggaagatgcaatgattgtaaacaaatcttcctgggagagagggtttgcctacgga
agcgttatcaagatggagagcattgacctttcccttaaagccagcagggcgggcgataac
ttagtatttggaatcaggcctggcgatccgaatgtgatggagaagttggatgccgacggg
ctgccttttgttggctctatcctacagcctggggaccccttctacagcttcatgaacctc
aacacgggagagaccttcactgtgtactatccgaataaggaagtcggcattgtagacaac
gtcaggttatgcagtaacgaccgtggcactgggaagttcaagaaggcttgcatcactgtc
agggttccccgaaatccaactgtcggagacaaatttgccagccgtcacggacagaaaggc
atcctgagccagctctggccaattgaggatatgccgttcacggagaacgggatggtccca
gacatcctcttcaaccctcacggctttccctcccgtatgaccatcgggatgttaatcgag
agcatggcggggaagtcagcggcgctgcacggtgtctcttacgacgccactcccttcacc
ttcacggagaaggactccgctttgaagtactttggcaagactttagtcagcgcaggttat
aacttcttcgggacggaaaagatgtacagcggcatcagcggcctggagctggaggcggag
atctttgtgggagtggtgtactaccagcgcctgcgccacatggtctcggacaagttccag
gtgaggacaacagggccccgagactctgtcaccaaccagcccatccaggggaggaacgtc
gaaggtgggattcgcttcggcgagatggagcgtgatgctttgctggctcacggcacgtct
ttcttgctgcaagaccgtctcttcaactgctccgatggctccatagcctacgtctgcacg
agctgcggcagcatgacatctcccgtgctggagaaaccaccgcactcctcctccgtgacc
agcaacaggaggtactcctgctccgtctgcagcgaggtggatgccatcgaggctgtccct
gtgccccacgtcttccgttactttgtggcggagctggcagccatgaacataaaaacaaag
ctccaggtggagtag
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