KEGG   Chroicocephalus ridibundus (black-headed gull): 134512621
Entry
134512621         CDS       T10910                                 
Symbol
WDR43
Name
(RefSeq) WD repeat-containing protein 43 isoform X1
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
crid  Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:crid00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    134512621 (WDR43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:crid03009]
    134512621 (WDR43)
Ribosome biogenesis [BR:crid03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    134512621 (WDR43)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Utp12 Beta-prop_WDR5 WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 ANAPC4_WD40 Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_SPT8 WDR90_beta-prop_4th Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_Aladin EIF3I Beta-prop_IFT140_1st Beta-prop_CAF1B_HIR1 Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_DCAF4 Beta-prop_ACSF4 Beta-prop_WDR41 Beta-prop_RIG_1st UTP15_C DUF6235 WD40_like
Other DBs
NCBI-GeneID: 134512621
NCBI-ProteinID: XP_063184199
LinkDB
Position
3:15736174..15760451
AA seq 661 aa
MAAAACGGEAAATAALCAFSPCDRRFFAISGPDGRLRVWETASSRLQQEYVPSAHLSAAC
TCLAWAPPGGRPPPSKDGPQRKKRKSEVAEVDKQLDIMAIGTAVGSVLLYSTVKGELQSK
LDGGHDNKVNCVRWHQDNCCLYSCSDDKHIVEWNTQTCKVKCKWKGDNSSVTSLCISPDG
KMLLSAGRTIKLWDLETKEVYRHFTGHATSVSSLMFTTVKPMNENKPFDGITGLYFLSGA
IHDRLLSVWQIRSDRKEKNAVMSFTVTDEPTFIDLTVSEVKEEPVKLAVVCRDGQLHLFE
HILNGYCKKPLTSNCTIQIATPGNDGDSTPKPVPILAAAFCSDKQSLLLVYGNLLQPIIE
KVSLNTPESHVCLIRDVQKALSLRTDVAVTKVKTPVVNSDTKVLVPGVPGHSTAVKTPSS
GKEKKKNKRKPGETEESIEERLEALDIDVSKVKTPGGLPQTDSFAVLLVQGLESNDAEIL
NRVLNTRKENVIKNTVARMPIHAVIPLLHELTKRLQGNPYSASLMVRWLKSVFTLHASYL
STLPDLIPQLGMLYQLMESRVKTLQKLSRLHGRLFILVTQVAASETVQDVTEVNQTAKLV
YEDESSEEEGSDDEMIADKDSDENWDEDEEKEEQSDEQDMTVEKEINGDSDLEPENESEE
E
NT seq 1986 nt   +upstreamnt  +downstreamnt
atggcggcggcagcgtgtggcggggaggcggcggcgacggcggccctttgcgccttctcc
ccctgcgaccgccgttttttcgccatctccggcccggatgggcggctgcgggtgtgggag
acggcgagcagccggttgcagcaggagtacgtgccctccgcccacctcagcgctgcctgt
acttgcctggcctgggccccgccggggggccgcccgccccccagcaaggatggtccacag
aggaaaaaacggaagtctgaagttgcagaagtggacaagcagttagatatcatggctatt
ggtacagcagttggtagtgttttgttgtacagcacagtcaaaggggaattacagagcaag
ctagatggtggtcatgacaataaagtaaactgtgtgagatggcatcaagacaactgctgc
ttgtatagctgttcagacgacaaacacattgtggaatggaacacgcagacctgcaaagta
aagtgcaagtggaaaggtgacaatagcagtgttacctctctatgcataagtccagatggg
aaaatgctgctgtcagccggtagaactataaaactgtgggacctggagaccaaagaagtc
tacagacatttcacaggccatgctacatcagtgtcatcattaatgtttaccacagtgaaa
cctatgaatgaaaataagccctttgatggaattacagggctttatttcttgtctggagct
atacatgaccgattactgagtgtatggcagatcaggtcagataggaaagaaaagaatgct
gtgatgtctttcacagtaacagatgaaccaacttttattgacctgactgtatcagaagtc
aaagaagagcctgtgaagttagcagttgtgtgcagagatgggcagttgcatttatttgaa
catatcttaaatggttattgcaaaaaacccttaacgtcaaactgtactatccagatagca
acgcctggaaatgatggggactccacaccaaaaccagtccctattctagcagctgcgttt
tgctcagacaaacagtctctgctgcttgtgtatggaaacctcttgcagcccatcatagag
aaagtgtctttgaacacccctgaatcccatgtatgcttgataagggacgtccagaaagcg
ttgtcacttagaacagatgttgctgtaaccaaggtaaagacgcctgtagtgaactcggac
accaaagttctagtacctggcgttccaggacatagtacagctgtcaaaactccatcctca
ggaaaggaaaaaaagaaaaacaagaggaaaccaggagagacagaggaaagcattgaagag
cgcctagaggcattggatattgatgtgagcaaagtaaaaactccaggtggccttccacaa
actgatagcttcgcggtacttttggttcaaggcttggaaagcaacgatgcagaaatctta
aatagagtgcttaacacaagaaaggaaaatgtaataaagaacacagtagccagaatgcct
atacatgctgtcattccactgctgcatgagcttacgaagagattgcagggcaacccatac
agtgcctcactaatggttcgatggctgaagtctgtttttactctacacgcatcctacctt
tccacattgccagaccttattcctcagctgggaatgctataccagctaatggagagcaga
gtaaaaactttgcaaaagctttcccgtcttcatggaagactcttcattcttgtcacccag
gttgcagcgtcggaaacagttcaggatgtaactgaggttaatcagactgcaaagcttgta
tatgaggatgaatcgtcggaggaggaaggctcagatgatgagatgattgcagataaagac
tctgatgaaaactgggatgaagatgaagaaaaagaggagcaatctgatgaacaagacatg
actgttgaaaaagaaatcaatggggattctgatttggaaccagaaaacgaaagcgaagaa
gaataa

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