Chroicocephalus ridibundus (black-headed gull): 134512726
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Entry
134512726 CDS
T10910
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03013
Nucleocytoplasmic transport
crid05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134512726 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
134512726 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crid03019
]
134512726 (NUP98)
03036 Chromosome and associated proteins [BR:
crid03036
]
134512726 (NUP98)
Messenger RNA biogenesis [BR:
crid03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134512726 (NUP98)
Chromosome and associated proteins [BR:
crid03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
134512726 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
134512726
NCBI-ProteinID:
XP_063184455
LinkDB
All DBs
Position
1:complement(11673858..11711793)
Genome browser
AA seq
1814 aa
AA seq
DB search
MFNKSFGTPFGGSTGFGTTSTFGQNAGFGTTSGGAFGTSAFGSNNNTGGLFGSTQTKPGG
LFGSTTFNQPATSSTSTGFGFGTSTGTSNSLFGTTSTGGGLFSSQNNAFAQNKPAGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPTSFTAAPTGTTIKFNPPTGTDTMVKSGVST
NINTKHQCITAMKEYESKSLEELRLEDYQANRKGPSNPVGAGAAAGLFGSSTATSSTATG
LFGSSTTNTGFSYGQNKTAFGTSTTGFGTGTTGGLFGQQSQTTSLFNKPFGQATTTQNTG
FFGNTNTLGQPNTSTMGLFGVTQPSQPGGLFGTAANTNAGTGFGTGTGLFGQANTGFGVG
GSTLFGNKPAGFGTTTTSAPSFGTTTGGGLFGNKPTLTLGTNTNTSNFGFGANTAGNSLF
GNKPATGTLGTGLGTGFGTALGAGQTSLFGNTQPKLGGTLGTGAFGAPGFNTSTATLGFG
APQPAVALTDPNASAAQQAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAA
QKALTTPTHYKLTPRPATRVRPKALQSAGSAKSHLFDGLDDDEPSLSNGAFMPKKSIKKL
VLKNLNSSNLFSPVNRENEDLASPSEYPENGDRFFLSVPPDENHRQDGEREEEDDQHEVT
RFYTNPIAKPIPQTPENAVHKHQNSVDDTIVALNMRVALRNGLEGSSEDASFHDDSLQDE
REEEPETVHHLHPAGIVLTRAGYYTIPSMEELARFTNDRNECIVTDFTIGRKGYGSIYFE
GEVNLTNLNLDDIVHIRRKEVIVYPDDERKPPIGEGLNRRAEVTLDGVWPTDKTSRCLIK
SPERLAEMNYEGRLESVSRKQGARFKEYRPETGSWVFKVAHFSKYGLQDSDEEEEEHPSK
VDTKKLKTTPVLPPGHLPPQQMTLNGKPPPPSQSPEVEQLGRVVELDSDMADITQEPLQE
PVVEDNMIEEPEAVPASTHIASTLGINPHVLQIMKASLLADEDDLDLILDHHPGKQPAKM
DTSQEICSPRLPISKSQGQKRYSVGGLLQSKFANIIFQPPSAAQQDFKGPRTLSSPPSAA
LWSATSPLASAFSVPSSVPEVQMKTVGVRRQQGLVPLEKSITYRKGKLLMDMALFMGRSF
RVGWGPNWTLVNCGDQLSGSTEIEELQCESVEYGFLPTPVAPKSLSESSFKVRVEKLSLE
QRKMDRDKQLYLIPLEIKLKHSTVHMDEQCPLLAPNPGVSAIHDYADWVRKASEDPAVTE
TVVKHWGLTWTLCEAIWGNLKELEASLEEPSEYTLALERRKAFSRWLSETAAGRIEEEVS
LSRHGNHIEAVFSCLTGKRIGEACRLAQQSGDHRLALLLSQLAGSQPVRDLLTMQLVDWH
RLQADCFIQEERLRIFALLAGKPVWQLSERISINVCSLLDWKRCMAVHLWYLLPPTASVS
KALAMYESAFQNTPECEKYACCPLPPYLEDSGCVIEEDDNAGRPLRDVCFHLLKLYSDRC
YELDQLLDPRSVTSDPLDYRLSWHLWEVLRALNYTHLFRQGQGVLNASYAAQLESEGLWE
WAVFVLLHEPDTHVREKAVRELINRHCVLSETPESWAKETFLTQRLCVPPEWIHEAKAVR
ARMEGDKHKEALFLFKAGHWNQCHKLVVRHLASDAIINENYKYLKGFLEDLAPPERSALI
QDWEMAGLVYLDYIRVIEMLDRIQQLDCSTYELERLHTKVTSLCKRIEQIQCHNAKDHLA
QSDMAKRIANLLRVVLSLQHAPEPVSDSTPDLQRVPLRLLAPHVGRLSMPEDYALEELRS
LTQSYLRELTVVTH
NT seq
5445 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcctttggaactccgtttggaggcagcactggctttgggacaacttca
acttttggacaaaatgccggctttggtactacaagtggaggagcgtttggaacatcagcc
tttgggtcaaacaataatactggaggcctctttgggagtacgcagacaaaaccaggagga
ttgtttggttcgactacgtttaatcagccagccacctcctccacaagcactggctttggg
tttggaacctcgactgggacatcaaatagcctgtttggaactaccagcactggtgggggc
ctcttctcatcccagaataatgcctttgcgcagaataagccagctgggtttggaaacttt
ggaactagtaccagcagtggaggtctctttggaaccactaacactacttccaatcctttt
ggaagtacctctggctctctttttggcccaactagttttactgccgctccaactggcaca
actattaaatttaatccaccaaccggtacagatactatggtaaaatctggagtcagcact
aacatcaataccaagcaccaatgtatcacagctatgaaagaatatgaaagcaaatctctc
gaggagctccgtttagaagactaccaggcaaataggaaagggccctcgaatcctgtggga
gcaggagcagcagcaggcttgtttgggtcttcaacggctacgtcaagtacagccacagga
ctgtttggctcttctactactaacactggcttttcatacggacagaataaaactgctttt
ggaaccagtacgactggctttggaacaggcacaacaggggggctttttggtcagcaatct
caaactaccagtctgtttaataaaccatttggtcaagccacaacgacgcagaacactggc
ttttttgggaataccaatactctagggcagccgaacaccagcacaatgggtctctttggg
gtaacccagccctcgcagcccggaggcctttttggaacagctgccaatacaaatgctggt
actggatttggaaccggaactggtctttttggacaagctaacacaggatttggtgttggc
ggttcgaccctgtttggtaacaagcctgctggatttggaaccaccacgaccagtgctccc
tcgtttggtacaaccactggcggcgggctctttggtaacaaaccaaccctgactttagga
accaatacaaacacttccaattttggttttggtgccaacactgctggaaatagtttgttt
ggaaataagccagcaactgggactctgggaactggacttggaacagggtttggaacggct
ctcggggcaggacagacatctttatttggaaacacccagcctaaacttggtggaacacta
ggaacgggagcatttggagcaccaggattcaatacatcaacagctactctgggctttgga
gctccacagcctgctgtagctctgacagacccaaatgcatcagctgcccagcaagctgtc
cttcagcagcatctcaatagcttgacttactcaccctttggagattctccgctcttcaga
aaccccatgtcagacccaaagaagaaagaagagaggctgaaaccaactaacccagcagct
cagaaggccttaacgacacccacccactacaagctgactccgcgtccagcgactagagtg
cgaccgaaagctttgcagtcagctggctctgcgaaatcccatctctttgatggtcttgat
gacgacgagccatccctatccaatggtgcattcatgccaaagaagagcatcaaaaagttg
gttttgaagaatctcaacagtagcaatctgttctcacctgttaatcgtgaaaatgaagac
ctggcgtccccatcagagtatccagagaatggagatcggttctttttgtcggtacctccc
gatgaaaaccacaggcaagatggtgagcgggaggaggaggatgatcagcatgaagtgact
cggttttacactaaccccattgccaagcccatcccacagaccccagagaatgctgtgcac
aaacaccagaacagtgtggatgacactattgtggctctgaatatgcgtgtggccttgcga
aatggtctggaaggcagcagtgaagatgcctcatttcatgatgattcccttcaggatgag
cgcgaagaggagcctgaaacagtgcatcatctgcatcctgcaggaattgttctcacgcga
gctggctattacaccatcccctccatggaggagctagcgcgattcaccaatgacaggaat
gaatgtattgtgacagacttcaccataggccgcaaaggttatggatcgatttactttgaa
ggagaagtaaatctaactaacttaaatctggatgacattgtacatatccgtagaaaagaa
gttattgtttaccctgacgatgaaagaaaaccacctattggtgaaggtttaaatagacga
gctgaagttaccttagatggagtctggcctacagataaaacatctcgttgcctgataaaa
agccctgaacgcctggcagagatgaattacgaaggcagactggagtccgtctcccggaag
cagggcgctcgattcaaggaataccgcccagagaccggatcttgggtgtttaaggtggca
cacttctccaagtatggcttgcaagattcagatgaggaagaggaggagcatccttcaaaa
gtggacacaaagaagttaaaaacgacacctgtgctgcccccagggcacctgccgccccag
caaatgaccctaaacggcaagccaccacctccatcccagagcccagaagtggagcagctg
ggcagggttgtggaactggacagtgatatggcagacatcacccaggagcctctccaggag
cccgtggtggaggataacatgatagaagagcctgaggcagtgcctgcttcgactcacatc
gcctcaaccctgggtattaacccccacgtcttgcagattatgaaagcttccttgcttgcc
gatgaagatgacctagatttgatcctggatcatcatcctgggaagcaacctgcaaaaatg
gatacttctcaagagatctgttctccgaggctcccaatttcaaaatcacaaggacagaaa
agatactcagttggtgggctgctgcagtcaaaatttgctaacataattttccagccacca
agtgctgctcagcaagatttcaagggaccgaggactttgagcagtcccccttctgctgcc
ctttggtcggcgacttctccgttagcgtctgcattctctgtgccatcatcagtccctgag
gtacagatgaaaacagttggtgtccgcaggcagcaagggcttgtacctctggagaagtcc
atcacctacagaaaagggaagctgctgatggatatggccctcttcatgggacgctcgttc
cgcgttggttggggacccaactggacacttgtcaattgtggagatcagttgagtggatca
actgaaatagaagagcttcagtgtgagtctgtggaatacggattcctgccaactcctgtt
gctccaaaatcactctcagaatcctctttcaaggttcgcgtggagaagctgagcttagag
cagcggaagatggacagagacaaacagctgtatctcatccccctggagataaagctgaaa
cacagcactgtccatatggatgagcagtgtcctctgctggcgcccaacccaggagtttcc
gctattcacgactatgctgactgggttaggaaggcatccgaggatcctgctgtgacagaa
actgttgtgaagcactggggcttgacgtggactttatgtgaagcgatttgggggaacttg
aaggagttggaggccagcttggaggaacccagcgaatacaccctcgccctggagcgcagg
aaagccttctctcgctggctctcggagaccgctgcgggacgaattgaggaggaagtctct
ctgtcccgacacggcaatcacatagaggctgtcttcagctgccttactgggaagagaatt
ggtgaagcttgcaggctggcacagcagtcaggtgaccacaggctggctctgctgttgtcc
cagctggccggcagccagcccgtccgggacctcctcaccatgcagctggtggactggcac
aggctgcaggcggactgcttcatccaggaggagaggttgcggatctttgccctgcttgca
ggaaagcctgtgtggcagttatcggagagaataagtatcaatgtgtgctccctgctggac
tggaagcgttgcatggctgtgcacctctggtacctgcttcctccaacagcttctgtgtcc
aaggcgcttgccatgtacgagtcagcgtttcagaacacaccagagtgtgaaaaatacgcc
tgctgtcctctgcctccttacctagaagattctggctgtgtaattgaagaagacgataat
gcaggaagacctctgagagacgtctgtttccatttgttaaagctctacagtgacaggtgt
tatgagcttgaccagctgctggatcccaggagtgtaacatctgaccctctggactaccgt
ctcagttggcacctgtgggaagtgctcagagccctgaattacacccacctcttcaggcag
ggccagggagtgctgaacgccagctacgctgcccagctcgaaagcgaagggctctgggaa
tgggctgtttttgtgctgctgcatgagcctgacacgcacgtacgggagaaggcagtgcgg
gagctcatcaaccgccactgtgttctctctgagacacccgagtcttgggccaaggagact
tttctgacgcagaggctctgcgtccccccagagtggattcatgaagcaaaggcggttcga
gcaaggatggagggcgacaagcacaaagaagccctcttcttgttcaaggctgggcactgg
aaccagtgtcacaagctggttgtcaggcacttagcatcagatgctattattaatgaaaac
tacaagtacctaaaaggattcctggaagatcttgcccctcccgagcgtagtgcactcatc
caggactgggagatggcggggctggtctacctggattacatccgcgttattgagatgctc
gatcggattcaacagctggattgttccacctacgagctggagcggttacacaccaaagtg
acgtcgctgtgcaagaggatagagcagatccagtgccacaacgcaaaggaccacctggct
cagtcagatatggccaagcgcatcgccaacctgctgcgggtggtcctcagcctgcagcac
gccccggagcccgtctccgactccacgccggacctgcagcgtgtccctcttcgcctgctc
gctccccacgtcgggcggctctctatgcccgaggactatgccttggaggagctccgcagc
ctcacccagtcttaccttcgggagctgacagtagtgactcattga
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