Chroicocephalus ridibundus (black-headed gull): 134512793
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Entry
134512793 CDS
T10910
Symbol
TRERF1
Name
(RefSeq) transcriptional-regulating factor 1 isoform X1
KO
K26583
transcriptional-regulating factor 1
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crid03036
]
134512793 (TRERF1)
Chromosome and associated proteins [BR:
crid03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
134512793 (TRERF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2_4
zf-C2H2
Myb_DNA-binding
zf-met
DUF7952
Myb_DNA-bind_7
zf-C2H2_2
Myb_DNA-bind_6
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
134512793
NCBI-ProteinID:
XP_063184610
LinkDB
All DBs
Position
3:complement(28037666..28139867)
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AA seq
1167 aa
AA seq
DB search
MGDQQLYKTNHTANSNENLYYQQHQMNSLPSLNHSYGTSVMDASQASPLSPQFPQDSRDS
IALPVGSKSLGSMDTSRQTSWTHSGSGNHVPVRNNLNNQSAMWSPLGQGESHDGYQYSYS
QPSENRSQKITSGVLHKLDSFTQVFANQNLRIQVNNMAQVLHTESSMVDNAGDSALRQLL
SQKPAVEQQPVTSTVQRYQPVPQQTHQNFASTQQKQQMQVMQHQQLYYDYQQHLSQMQMH
SAFQQGQTHVQQMQSQQLLPQQMQHLQQTQYYAQPQQGHQRLSLQEIQQQQQQPTRQQQQ
RQCPMQIAQYYQTQPVMQQLQQQQQQMQLPLPPYHREHDPKTMHEPHQYPQDPSHPVQLI
QLGAVPQYCYQDPHEQYRHLYPQSLLPQQDQQKQYPSESRAPSLNSHVGLTPPETTEDPA
RQEINSVGNAGPHRTLLPPSGVHLNNKSSQQDSPSAAWPQQVQLSDGRLQPLSPEQSGQN
RETLPERADAKNKLMCSICLKEFKSLPALNGHMRSHGGVRASPNFKQDEGEKPPQQPLPK
EVDSLAPIVMPVSVPVKLLSPEPSTQPSASSATVKDKPANSVSDDEMPVLVKMTCSPPCS
PKVANPCSSSEISKKPHQSAVKLEESFKPLQDKKKYRHRPEPLFIPPPSFNFSMSHSGAT
LYQSQLRSPRVLGDHLLDRTHELPPYTPPPMLSPVRQGSGLFSSVITSSHSTSHTQLPLT
PLTPTPRVLLCRSNSIDGSVIPVTPGPGEQTVEPRINIGSRFQADIPELQDRLLMEKDVH
KATLVWKPWPELENKVFQQRVEDLLNMSCSSVLPGGGTNSEYALHSLFEAKGDIMVALEK
LLLRKPLRLKCHPLANYHYAGSDKWTHQERRLFKEALSTYSKDFIFVQKMVKSKTVAQCV
EYYYTWKKILRLGRKHRTRLEKKREECLTSGEEEVLEEDEETEEDRKEEREMQKSPDPPA
IPLVGPIDLPSLQSLSLSSSSFICEMPNCGAVFSSRQALNGHARIHGGTNQVTKTRCTIP
GTKQKSGTQSGYCSIKSSPAHSTTSGETDPTTIFPCKECGKVFFKIKSRNAHMKTHRQQE
EQQRQKAQKAAVAAEMAATIARTTGPAGHSLIPLDHMNLVKHVENVGDIDDDVVQELGGV
MEENEVMDADLLLDDEDADLLQDDAEL
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccagcaattgtataaaactaaccatactgccaacagcaacgagaacttgtac
taccaacaacaccaaatgaactcccttccatctctaaatcatagctatgggacatctgtt
atggatgcctcccaagcatcccctctctccccccagtttccccaagattcaagagacagt
atagctttgcctgtaggttcaaaaagtcttgggtcaatggatacatctagacaaaccagt
tggacacattctggctcaggaaaccatgtcccagtgcggaacaatttgaataatcaaagc
gcaatgtggagccccctcgggcagggggagtcccacgacggataccaatattcttactct
caacccagtgaaaatcgatcacaaaaaattaccagtggggtcctgcataaattggactcc
tttacgcaagtatttgctaaccaaaatctgaggattcaagtcaacaacatggctcaggtt
ttgcacacggagtcttcgatggtggataatgctggtgacagcgcgctcaggcagctgctg
tcccagaagccagcggttgagcaacagcctgtaacttccactgtacaaagatatcaacca
gtgccacagcaaacacaccagaattttgcaagcacacagcaaaagcaacaaatgcaagtc
atgcagcaccaacagttgtactacgactaccagcagcatttatcacaaatgcagatgcat
tccgcgtttcagcaaggacagacgcacgtccaacaaatgcagtcccagcagctcttaccg
cagcagatgcagcacttgcagcagactcaatactacgctcagccgcagcagggacatcag
cggctctcgctacaggagatccagcagcagcagcaacagccaactcggcagcagcagcag
cggcagtgtccaatgcaaatagctcagtattaccaaacgcaacctgtcatgcagcagtta
cagcaacagcagcaacagatgcaattgccgcttcctccgtatcacagggaacacgatcca
aagactatgcatgaaccgcaccagtaccctcaggatccaagtcatcctgtgcagcttatc
cagttgggagcagtgcctcagtattgctaccaagacccacacgaacagtacaggcacttg
tacccgcagagtttactgccgcagcaagatcagcagaagcaatacccgagtgagagcaga
gcaccatctctgaactcccacgttggcctcactccaccagagaccacggaggatcccgca
cggcaggagatcaattctgtaggtaatgctggccctcatcgaactcttttgcccccctcg
ggagttcatctgaacaacaaaagctctcagcaagactctcccagcgccgcgtggcctcag
caggtgcaactgtcagatggcagactgcagccgctctccccagaacaaagtggccagaac
agagaaacacttcctgagagagctgatgcgaagaacaagctaatgtgttcaatatgcttg
aaggagtttaagagtttgcctgctctgaatggtcacatgaggtcacacggaggagtaaga
gcatctccgaacttcaaacaggatgaaggagagaaaccaccacagcagccgctgcctaaa
gaggtggatagcctcgcgcccatcgtcatgccagtgtctgtccctgtaaagcttctgtca
cctgagcccagcacgcagccctctgccagctctgccacagtcaaagacaagcctgccaac
tctgtgtcagatgatgagatgcccgttctcgtgaagatgacttgctctccaccgtgcagt
ccaaaagtggccaacccctgctcatcctctgaaattagcaaaaaacctcatcaaagtgct
gtaaaattggaagaaagcttcaaaccattgcaggacaagaagaagtatcgacacagaccc
gaacctctcttcatacctcctccttccttcaacttcagcatgtctcactccggtgccacc
ctgtaccagagtcagcttcgctctccccgtgtcctcggagatcatctgctagaccggaca
catgagctcccaccctacactccaccaccaatgcttagtccagttcggcaaggatctggt
ctcttcagtagtgttatcacatcatctcatagcacctcacatactcagctgccacttact
ccactgacacctactccacgggtgctcctgtgtcggtctaacagtattgatggaagtgtc
attccggtgacgccggggcctggagaacagactgttgaacctcgaatcaatattgggtcc
aggtttcaggctgatattcctgagctgcaggacagattgctaatggagaaagatgtgcat
aaggctactttggtgtggaaaccgtggccggaactggagaacaaagtcttccaacaaaga
gtggaagaccttctaaatatgagctgttccagtgtgttacctggtggaggaactaactca
gaatacgctttgcactctctctttgaagctaaaggagatattatggttgctcttgagaag
ctgctgttgagaaagccactgagattgaagtgtcaccctttggcaaattaccactacgcc
ggctccgacaaatggacgcatcaagaaaggaggctgttcaaagaggcattatccacctac
agtaaagatttcatatttgtacagaaaatggttaagtctaagacagttgcacagtgtgtg
gaatactactatacctggaagaaaatcttgcgtttgggacggaaacacagaacacgttta
gagaaaaaaagagaggaatgcctgacaagtggagaagaggaagtgttagaggaagatgag
gagacagaagaagacagaaaggaagaaagggaaatgcagaagtctcctgacccaccagct
atccctcttgttggacctatagatctgccttcccttcagagtctttcactttcttcgtcc
tccttcatctgtgaaatgccaaactgtggcgctgtgttcagttcccgacaagcgctaaat
ggccatgctcgcattcatggaggtacgaatcaggtgacaaaaacacgatgcaccattcca
ggcactaagcagaaatctggtacgcagagcgggtactgctccatcaagagttcacctgcc
catagcacaacaagcggtgagaccgacccgacgacaatctttccttgcaaggagtgtggc
aaggtatttttcaaaatcaaaagccgcaatgctcatatgaaaactcacagacaacaagaa
gaacagcagaggcagaaggctcagaaagctgctgtggcagcggaaatggcagccactatt
gcaagaactactgggccagctgggcatagtttgatccctctggatcacatgaatttggtt
aaacatgtggaaaatgtcggtgacattgacgacgatgttgttcaggagctgggtggtgtc
atggaagagaatgaagtcatggatgctgaccttttattggatgatgaagatgcagatcta
ctgcaggatgatgctgagttgtaa
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integrated database retrieval system
