Chroicocephalus ridibundus (black-headed gull): 134512832
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Entry
134512832 CDS
T10910
Symbol
SIX2
Name
(RefSeq) homeobox protein SIX2
KO
K19472
homeobox protein SIX2
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crid03000
]
134512832 (SIX2)
Transcription factors [BR:
crid03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
134512832 (SIX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
Phage_mat-A
YdaS_toxin
HTH_TSHZ3
HTH_72
Motif
Other DBs
NCBI-GeneID:
134512832
NCBI-ProteinID:
XP_063184696
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All DBs
Position
3:complement(31357123..31361875)
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AA seq
287 aa
AA seq
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MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSAHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENNENSNSNSHNPLSASMNGNKTVLGSSEDEKTPSGTPDHTSSSPALLLSSNP
GLQPLHGLGHPQGPSAIPVPSADPMHHHNLQDSILNPMSSNLVDLGS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgctcccgacttttggcttcacccaagagcaagtggcctgcgtctgcgaggtg
ctccagcaaggcggcaacatcgagcggctggggcggttcctctggtccctccctgcctgc
gagcacctccacaagaacgagagcgtcctgaaggccaaggcggtggtggccttccaccgg
ggcaacttccgcgagctctacaagatcctggagagccaccagttctcggcgcacaaccac
cccaagctacagcagctctggctgaaggcgcactacatcgaggcggagaagctgcggggg
cgacccctaggggcggtgggcaagtaccgggtgcgccgcaagttcccgctgccccgctcc
atctgggacggcgaggagaccagctactgcttcaaggagaagagccgcagcgtcctccgc
gagtggtacgcccacaacccctacccgtccccacgcgagaagcgggagctggccgaggcc
accggcctcaccaccacccaggtcagcaactggttcaagaaccgccggcagcgggaccgc
gcggccgaggccaaggaaagggaaaacaacgagaattccaactccaacagccacaacccg
ctttcggcgtcaatgaacgggaataagacagttttggggagctcagaggacgagaagacg
ccgtcagggaccccggatcacacctcctccagccccgcgctgctgctcagctccaacccc
gggctgcagcccctgcacggcctgggccacccccagggccccagtgccatccccgtgccc
agtgccgaccccatgcaccaccacaacttgcaggactccatcctcaaccccatgtcatcc
aacctggtcgatctgggctcttaa
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