Chroicocephalus ridibundus (black-headed gull): 134512945
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Entry
134512945 CDS
T10910
Symbol
SPAST
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crid04131
]
134512945 (SPAST)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
crid04812
]
134512945 (SPAST)
Enzymes [BR:
crid01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
134512945 (SPAST)
Membrane trafficking [BR:
crid04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
134512945 (SPAST)
Cytoskeleton proteins [BR:
crid04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
134512945 (SPAST)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
Vps4_C
AAA_22
AAA_5
TIP49
AAA_16
Mg_chelatase
AAA_14
MIT
IstB_IS21
AAA_24
DUF815
NPHP3_N
nSTAND3
AAA_2
Motif
Other DBs
NCBI-GeneID:
134512945
NCBI-ProteinID:
XP_063184934
LinkDB
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Position
3:complement(40062808..40104346)
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AA seq
613 aa
AA seq
DB search
MNSPGGRGKKKGSAGSSSAPPAAGASASSPPGPAPPVPPAGAAAAASPHKRNLYYFSYPL
FAAFALLRFVAFQLGLLFAWLCERLSRGALMAAKGSRAGAGDAPEPGGAPETVRACHKRA
FECISMALRIDEDERAGQKEQAVEWYKKGIEELEKGIAVLVIGQGEQCERARRLQSKMMT
NLAMAKDRLQLLEKLQAVLQISKPQTEVYNDSTNLACRNGHLQSESGAVPKKKDPLTHTS
NSLPRSKTVAKTGSTGLSGHHRTPSYSGISSSSVSRPAPNPAASTHKAAPKNSRTNKPST
PTTAPRKKKDLKIFRNVDSNLANLILNEIVDSGPAVKFDDIAGQELAKQALQEIVILPSL
RPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLV
RALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSSGEDRILVM
GATNRPQELDDAVLRRFTKRVYVSLPNEETRLVLLKNLLSKQGSPLTQKELAQLARMTDG
YSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIKLSDFTESLKKIKRSLSPQTLEA
YIRWNKDFGDTTV
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaattctccgggcggcagagggaaaaagaagggctcagccggctccagctccgcgccc
ccggccgccggggcctcagcctcctcgccgcccgggccggccccccccgtgccgccggcg
ggggcggcggcagcggcctccccccacaagcggaacctgtactacttctcgtacccgctc
ttcgccgccttcgccctgctccgcttcgtcgccttccagctcgggctgctcttcgcctgg
ctctgcgagcgcctctcccgcggcgccctcatggccgccaagggcagcagggccggggcc
ggcgacgcgcccgagcccggcggggcgcccgagacggtgcgggcctgtcacaagcgggcc
ttcgagtgcatctccatggcgctgcgcatcgacgaggacgagagagcaggacaaaaggaa
caagctgttgaatggtataagaaaggaattgaagaactggaaaaaggaatagctgtctta
gtaattggtcaaggtgagcagtgtgaacgggctcgacgtctgcagtctaaaatgatgaca
aatttggcaatggccaaggatcgcttgcagcttttagagaagctgcaggcagttttgcaa
atttccaagccgcaaacggaggtctataatgacagtactaacctggcatgccgcaatgga
catctccagtcagaaagtggagcggttccaaaaaagaaggatcccttaacgcacacaagc
aattcccttcctcgttcaaaaactgttgcaaaaactggatccacaggcctttcaggtcac
catagaactcctagctacagtgggatatcatcatcttctgtgtctagaccagcacctaat
cctgcagcttcaactcacaaggctgctcctaaaaatagcagaacaaataaaccttctact
cctaccactgctcctcgaaaaaagaaagacttgaagatatttagaaatgtggacagtaat
cttgctaatcttatcctgaatgaaattgttgatagtggtccagctgtcaaatttgatgat
atcgcagggcaggagctggctaaacaagctttgcaagaaattgttatccttccttcgctt
agacctgagttatttacaggacttagagctcctgcacgtggattattgctgtttggccca
ccaggaaatgggaagacaatgttggccaaagcagttgctgcagaatcaaatgctactttc
tttaatataagtgcagcgagcctaacttcaaaatacgtgggtgaaggggagaaactggtg
cgtgctctatttgcagtagccagagaacttcagccttctataatttttattgatgaagtt
gatagccttttgtgtgaaagacgagaaggtgaacatgatgctagtaggcgtctaaaaaca
gaatttttaatagaatttgatggtgtgcagtcttctggagaggacagaatacttgtgatg
ggagcaacaaacaggccacaggagcttgatgatgctgttctcagacgattcaccaaacgg
gtatatgtgtcgttaccaaatgaggaaacaagattggttttgctaaaaaatcttctaagc
aagcaaggaagtccattgacccaaaaagagttggcacaactagctagaatgacagatgga
tactctggaagtgatttaaccgcattagcaaaggatgcagcgctgggccctattcgagaa
ttaaaaccagaacaggtgaagaacatgtctgccagtgagatgagaaatatcaaactgtca
gatttcactgagtctttgaagaagataaagcgcagtttgagccctcagaccctggaagca
tatattcgctggaacaaggacttcggagataccacggtgtga
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