Chroicocephalus ridibundus (black-headed gull): 134513099
Help
Entry
134513099 CDS
T10910
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PNLDC1 isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03018
RNA degradation
Brite
Enzymes [BR:
crid01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
134513099 (PNLDC1)
Messenger RNA biogenesis [BR:
crid03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
134513099 (PNLDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134513099
NCBI-ProteinID:
XP_063185284
LinkDB
All DBs
Position
3:complement(55145304..55159666)
Genome browser
AA seq
531 aa
AA seq
DB search
MEVGAAGFERRLPRLRGRVRRAAFLALDMEFTGLHSISPQNNQPSLFDSPAERYLKARQS
VQRFTVTQLGLAVFSNENSNKYVVHSYNFFLFPSTLGLTDVEFTLSASSIQFLSHYGFDY
SKFLKDGIPYMNEVQEKILSQHLLAGSSKVSSALDRDVLKKAIDEVTCWIVAAEEEETMI
LQDLNGYQMFEVQLVLRKALQNVWTQPLGDKKVMVRKVSPQHRQLLENSPYDYCRKELIL
LSARGFTNLFQTLVKAKKPLVGHNMLMDLMHLHDKFYKPLPESYEEFKRNIHNLFPVLID
TKTVTKSIWKKCPLPRVVNLLEVYEVLCSNLNPKDSTCPVIALASDCSRYAEKKSPHEAG
YDAFLCGSVLLKSAHLLLCRSTDDAVEADPSFSQYLTVLAEYLNKVNFIRGGVSSINFSG
KDTPCEYPPALVVHVRGWPGLNERQIYEEFKPLCLFDVRRLSKNQFIMLSNKFKHVRLVL
RDYKHHPHLRVSVYRHWRHSPRVNCLLQVSGIVALWSLLAFVLGGAPCCSL
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgggggcggcgggcttcgagcggcgcctgccgcgcctgcggggccgcgtccgc
cgcgccgccttcctggccctcgatatggagtttactggcttacattccatttccccacaa
aataaccagcccagcctgttcgattccccagcggagcggtacctgaaggccaggcagagc
gtccagcgcttcactgttacgcagctcgggctggcagtattttcaaacgaaaattcaaac
aagtatgtggtgcattcgtacaacttttttctctttccctcaacgttgggacttacggat
gttgaattcaccctctctgcatctagcattcagttcctgtctcattatggctttgactat
agtaagttcctcaaagatggaatcccgtacatgaatgaggtacaggagaagatccttagc
cagcatctcttagcgggtagctcaaaagttagcagtgccctggacagggatgtgctgaag
aaggctattgatgaagtgacctgttggatagtagcagcagaggaagaggagactatgatt
ctgcaggacctgaatggctatcagatgtttgaagttcaactggttctgagaaaggccctc
caaaatgtttggacacagcctctgggagacaagaaggtaatggtgaggaaagtgagtcca
cagcatcgtcagcttctggagaactctccttatgactactgccggaaggagctcattctc
ctgtctgcccggggtttcaccaacctcttccagacacttgttaaagccaagaagcccctg
gtgggacacaacatgcttatggaccttatgcatcttcacgacaagttctacaagcccctt
ccagaaagctatgaggagtttaaaaggaacattcacaacctgtttcctgtcctcatagac
accaagactgtaacaaaatccatctggaagaaatgtccacttcctcgagtagttaatctt
ttggaggtgtatgaggttttgtgcagcaacctaaatcccaaagattcaacgtgcccagtg
atagctcttgcaagtgactgctcaagatatgccgagaagaaatctcctcacgaggcaggc
tatgatgcatttctctgtggttcagttcttctgaagtcagctcatttgctactgtgcaga
tccacagatgatgcagtggaggccgatccttctttctctcagtatctcaccgtgttagcc
gagtatctgaacaaagtgaatttcatccgaggtggtgtttcaagcattaatttttctggg
aaagacactccatgcgaatatccccctgccttggttgtccatgtccgaggctggccaggg
ctgaatgaaaggcagatttacgaagagtttaaaccgctttgtctctttgatgtcagacgg
ctttcaaagaaccagttcattatgctctccaacaaatttaagcacgtcaggctggtcctg
cgagattataagcatcaccctcatctgcgggtttccgtctatcgccactggaggcactct
ccacgagtgaactgcctgctgcaagtctctggtattgtggcactgtggtctctcctggcc
tttgtgctcggaggagctccttgctgttcgttgtaa
DBGET
integrated database retrieval system
