Chroicocephalus ridibundus (black-headed gull): 134513291
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Entry
134513291 CDS
T10910
Symbol
COL10A1
Name
(RefSeq) collagen alpha-1(X) chain
KO
K19479
collagen type X alpha
Organism
crid Chroicocephalus ridibundus (black-headed gull)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
134513291
NCBI-ProteinID:
XP_063185819
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Position
3:75493643..75501042
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AA seq
676 aa
AA seq
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MHLQISLLLLFCLNIVHGSDGYFSERYQKQSSIKGPHFLPFNVKSQGVQIRGEQGPPGPP
GPIGPRGQPGPAGKPGFGSPGPQGPPGPPGPPGFSAVGKPGMPGLPGKPGDRGLNGEKGE
AGPVGLPGARGPQGPPGTPGPAGLSVPGKPGPQGPPGAQGPRGLPGEKGEPGIPGINGQK
GENGFGVPGRPGNRGLPGPQGPRGLPGPAGIGKPGENGLPGQPGMKGDRGLPGAPGAAGI
PGPQGPPGEPGEAGIGKPGPMGPPGAAGIPGAKGHPGPAGLPGSPGLPGFGKPGLPGMKG
HRGPEGPPGLPGPKGDQGPAGVSGEPGPVGPPGNMGPQGLKGLPGENGLPGPKGDMGPAG
PPGFPGAKGERGLPGLEGKPGYPGEQGLAGPKGHPGFPGPKGDTGHAGPPGLPGPMGPQG
VKGVPGINGEPGPRGPSGIPGIRGPIGPPGLPGAPGAKGEPGAPGLPGPAGIATKGLSGP
MGPPGPPGPKGNNGEPGLPGPPGPPGPPGQAVIPQMPESYVKAGESRELSGMSYMKGVNQ
ALTGMPVSAFSVILSKAYPGATVPIKFDKILYNRQQHYDPRTGIFTCRVPGLYYFSYHVH
AKGTNVWVALYKNGSPLMYTYDEYKKGYLDQASGSAVIDLMENDQVWLQLPNSESNGLYS
SDYVHSSFSGFLFAHN
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgcatttacaaatatccttactgctgctgttttgtctgaacattgtccacggcagcgat
ggatacttttctgagagataccagaaacaatccagcatcaaggggccacattttctacca
ttcaatgtaaagagtcaaggtgtgcagataaggggtgaacaaggaccccctggtcctcct
ggccctattggaccacgaggacaaccaggacctgcaggaaaaccaggctttggaagtcct
ggtccccaaggaccccctggtccgccaggaccacctggattctctgctgttggaaagcca
ggcatgccgggtctaccaggaaagccaggagatagaggactaaatggtgagaaaggagaa
gctggacctgttgggctcccaggagcaagagggccacaaggaccccctggcactcccggc
cccgcaggactgtctgttcccggcaagccgggaccgcaaggccctccaggagctcaaggg
ccgaggggcctccccggtgagaagggagagcccggtatccctggtataaacggacaaaag
ggagaaaatggattcggtgttccaggccgcccgggtaacaggggtcttccaggcccgcag
ggaccccggggccttcctggtcctgctgggatagggaagcctggtgaaaatggtcttcca
ggtcagcctggtatgaaaggtgacagaggcttaccaggtgcacccggagcagctggtatc
ccaggcccccagggtcccccaggagaacctggagaagctggcatcggcaagcctgggcca
atgggaccaccaggagcagcaggcatccccggagccaagggacatcccggacctgcaggc
ttgcctggatccccaggtcttccaggattcggaaagccaggattgccaggaatgaaggga
cacagggggcctgaaggtcctcctggccttccaggacctaaaggagaccaaggcccagct
ggcgtgtcaggagaaccaggacctgtcgggccaccagggaacatgggcccccaaggactc
aaaggcttgcctggtgagaatggcctacctggacccaagggtgacatgggccctgcaggc
cccccaggattcccaggggccaagggtgaacgaggtctaccaggattagagggaaaacca
ggatacccaggtgagcagggtcttgctggtcctaagggacacccaggtttcccaggtccg
aaaggcgacactggccacgctgggccacctggcttgcctggcccaatgggtccacaagga
gtgaagggagtgcctggtatcaatggtgagcccggccccagagggccttcaggaatacct
gggatcagaggccccatcggcccccctggcctgccaggagcccctggtgcaaaaggtgag
ccaggagcaccaggactgccaggcccagcaggtatcgctacaaaaggattaagtggaccc
atgggaccacctggaccccctgggcctaaaggcaacaatggagagcccggcttgccaggc
cccccaggtcctcctggtccccccggccaagccgtaatcccacagatgcccgaaagctac
gttaaagcaggagagtctcgggagctatcaggaatgtcttacatgaaaggagtaaatcaa
gctcttacagggatgccagtgtctgctttcagtgtcatcctctcaaaagcctaccctggg
gcaacagtccccatcaaatttgataaaatcttgtacaataggcagcaacactatgacccc
agaacaggaatcttcacctgcagggtccctggactgtactatttctcctaccatgtccat
gcaaaaggaacaaatgtttgggttgcactctacaaaaatggttccccactcatgtacacc
tatgatgagtacaagaaaggataccttgaccaggcttccggcagtgctgtcatcgatctc
atggagaacgaccaagtatggctccaactgcccaattcagaatctaatggtctctattcc
tctgactacgttcattcttctttctcaggtttcctatttgctcataactaa
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