KEGG   Chroicocephalus ridibundus (black-headed gull): 134513536
Entry
134513536         CDS       T10910                                 
Symbol
ATM
Name
(RefSeq) serine-protein kinase ATM isoform X1
  KO
K04728  serine-protein kinase ATM [EC:2.7.11.1]
Organism
crid  Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03440  Homologous recombination
crid04068  FoxO signaling pathway
crid04110  Cell cycle
crid04115  p53 signaling pathway
crid04210  Apoptosis
crid04218  Cellular senescence
Brite
Enzymes [BR:crid01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     134513536 (ATM)
Protein kinases [BR:crid01001]
 Serine/threonine kinases: Other
  PIKK family [OT]
   134513536 (ATM)
DNA replication proteins [BR:crid03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    134513536 (ATM)
Chromosome and associated proteins [BR:crid03036]
 Eukaryotic type
  Meiosis-specific proteins
   DSB formation-related proteins
    134513536 (ATM)
DNA repair and recombination proteins [BR:crid03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    134513536 (ATM)
SSDB
Motif
Pfam: PI3_PI4_kinase FAT TAN FATC M-HEAT_ATR HEAT HEAT_ATR TTI1 LRAT
Other DBs
NCBI-GeneID: 134513536
NCBI-ProteinID: XP_063186505
LinkDB
Position
1:20631982..20707378
AA seq 3068 aa
MSLALHDLLICCRRLENEKAVERRKEIENFKRLLRDSETLLQLDRNSDSKQAKQLNWDAV
FSVLQKCFQKEMKNLQLTKPNASASTQTTRQKKMQEVGSLVKYFIRCANKRGPRLKCQEL
LIYVMEIIRDPTSCAAYGSDCSSILLKDILSIRKYWCEISQQQWSELLILYGQLYLRPSG
KINRVLVARIIHTLMRGYCFQTDGLSSDMFTFFSKAMQCVRQEKNTAGLDHIVGAMNIFC
NKFAVNCRIRICKIGEEILPTVLYIWTQHRPKDSLKESIIELFRLQVHVHHPKGAKTQGI
GAYDSAKWHSILHNLYDLLVNEINLISSRGKYSSGSRNIAVKENLIELMADICHQVFTAD
TKVLEISHSYTVSQRESSDETVPSKRRRIELGWELIRDNLQRSQDFDVIPWLQITAQLIS
KYPMSLPNSELPPLLNVLHQLLPQQRRGERTPYVLQCLTEVALCQNQKTDLKSTHKLELQ
RTWAKIWSLTIRSVSFQQIEVESFGLLGAMIQGNLVVTDKELWKIFSGPACKPSSSAVCC
LALVMSACSVPKNLDVGMEQNNCERNLDFVLKEAIMKWVLSCHLEEELEECAELPPVLCS
DFPHLILQKILVSLTMKNCRAAMSFFQNDAKCVQHLQGKEENNFSDVEELYLQTTFDEMD
IFTNFAVNVADKNATGSRLAINQNLRETLEYCLLAMSEKLISSYTPKSKVVAAEHLVRCV
GLLIGVLGCYCYTGIFKEEDACKSKLFQTAKSLIHYAGEGISQSKNKLNEDAQINSLRTL
IMQCTKCLCNCTKNSANKMLSNIFLHLLTSKFMNDLVDICKNLMTFTGKTAELGEADLMG
NDPEESIMEADNQVSDDLFDDHSVTDISDTNESSEMQNVTGALSPLAEEQLTKQDLLLLE
ILRFLCICVTTVQIQTVSFRASDIRRKLLMLTDGSVFDGAKPLHLHMYLVLLKELPTEEH
LLPEDDIHMLLKPLPDVCSLYRRDQEVCKVILNNLLPIAIGLAQSNPHAEETRDARGQFL
TVVEAFWHLAQGGKCTAPVRVALLNCMKALLEADPHCKWAILKVKNEDLPVSDTFPHFLA
DSHHQVRILAAKSITSLFQDVKKRDSSGMSKPLPLKLQQKAFENVYLRVQEGMRNLVRDD
ASPEDLLDKQCNGKAVLLMLITMVLCCSPVCEKQALFAICQSVKENGLDPQLVKKVLKKI
SDIFGYKSIEDFMTSHLDYLVMEWLKINDSGYSLSAFPYVLLNYTSLEEFYRSCYKVLVP
HLVIRSQFEDVKSLANKIEKDWRQVLADCFPKILVNILPYFAYQSHGKSEVAEQRDTASK
VYDMLKDENCLGKQQIDNLSHNNLPEIVVELLMTFHELPDTTAEAAAHPSKYVRELDPAP
NPPHFPSYVIKATLNYISNCHKSKLKSLVAVLSKSPDSFQKILLALCKHASDANNIYKKH
RVLIIYHLFVSLLLKEIKDGLGGAWAFVLRDVIYTLIHHINSRPVIIRDISMRSFSLCCD
LLHHVCHTAITCCNDALESHLHVIVGTLIPLAVDQPEIQEQVLGLLKYLVIDNKDNENLN
HAIKCLDPFPEYPAFKDLRAAQQKIKYSEGPYSLLEEINHFLSVGVCDSLPLTRLEGLYD
LRKQLEQYKDQMKDLLKNFQEKPEDSVVVKLVVSLLQLSKMAVNRRGEKAVLEAVGGCLG
EIGPMDFSTIALQRAENALDSKAVDLLEDRKLQWVFIMLTQINTALTDNCIDVRAAAVSC
LKNILATKSGSEFWEVYKNKADPMLIYLQPFRTSRKKFFVVPANDTEAPLETLDDTNLWI
PLGESHETWIKHLTSSILDSGGVQNEVLQLMKPLCEVKTDLCQTLLPYLIHDILLHDPDE
SWRNLLSVHIQKFFTACCRFASSSRSTTPPNSDSEQETQNFRSLDKVSRRAMLAVVDYLR
RQKRSVSGTVFDDSFWLKLNYLEVAIAAQSCAAHFTALLYTEIYADKINIDKQQERSSFK
AAKSLSFEEESQRTTITLLNEKSKEETGISLQDLLMDIYRSIGEPDSLYGCGGGRMLQPL
ARIRTYEHEAVWEKALVTYDLEASLSPSTRQAGIIEALQNFGLCHTLSMYLKGLEHENTE
WCAELQEIRYQAAWRNMQWGHISSVKDETGRPGYHESLYDALQSLRDKEFSAFYDSLKDA
RVNEVEELCKGSLESVYSLYPTLCRLQLIGELENIGLLFSRSVTTQQLNDTYLKWQRQSQ
LLKDSDFRFQEPIMALRTVILEILLEKENENTKRECIKDILTKHLVDLSRLARTAKNTQL
PERAMFQIKQHNPMGHGVSEWQLEEAQVFWAKKEESLALNILKGMIKKLDADWFQVENDP
HLKLIYTECLRLCGTWLAETCLENPTVIMQKYLEKAVEIAASHGGDGSDELKKGKMKAFL
SLARFSDNQYQRIENYMKSSEFENKQALLKKAKEEVGLIRERKVQTNRYTVKVQRELELD
ECAIHALTEDRKRFLCKAVENYISCLLSGEEHDMWIFRLCSLWLENSGVDKVNEMMKKNA
EKIPSYKFLPLMYQLAARMGTKMMGGLGFHEVLNNLMSRISLDHPHHTLFIILALANANK
DELLTKPDAIRRNKLIKNAPKEISQLDVDRMKAASNIINIVRNRRACMVRGVEALCDAYI
TLANLDASPWKSQRRGVSIPADQPIIKLKNLKDVVVPTMEIKVDPTGQYENLVTIQSFKP
EFRLAGGLNLPKIIDCVGSDGKERRQLVKGRDDLRQDAVMQQVFQMCNTLLQQNTETRKR
KLTIRRYKVVPLSQRSGVLEWCSGTTPIGEFLVNVEEGAHKRYRPKDYSSYECQKIMMDA
QKKHFEEKYNIFMKVCENFQPVFRYFCMEKFLDPAVWFEKRLAYTRSVATSSIVGYILGL
GDRHVQNILIDEQTAELVHIDLGVAFEQGKILPTPETVPFRLTRDIVDGMGITGVEGVFR
RCCEKTMAVMRNSQEALLTIVEVLLYDPLFDWTMNPLKALYLQQRPEDEADISSSLHADP
QECKRKASSDDQSFNKVAERVLMRLQEKLKGVEEGTVLSVGGQVNLLIQQAMDPKNLSRL
FPGWKAWV
NT seq 9207 nt   +upstreamnt  +downstreamnt
atgagtcttgcattacatgatctgctcatttgttgtcgtcgccttgaaaatgagaaagct
gtggagcgaaggaaggaaattgaaaatttcaagcgacttctccgtgattctgaaacactt
ctccagctggaccggaattctgattctaaacaagcaaaacaactcaactgggacgctgta
tttagtgtcttgcagaaatgtttccagaaagaaatgaagaacctgcaattgacaaaacca
aatgcatctgcttcaacccaaactactagacagaaaaagatgcaagaagttggaagcttg
gtcaaatatttcatcagatgtgctaataaaagaggacccagactgaaatgtcaagaactt
ctgatttacgtcatggaaattataagagacccaacaagttgtgctgcttatggatctgac
tgtagtagtatactcctaaaagatatcctctcaataaggaaatattggtgtgagatatcc
cagcagcagtggtcagaattgctgattctgtatggccaattatacctcagaccttctggg
aagatcaatagagtcttggtggctaggataattcacacgcttatgagggggtactgcttc
cagactgatgggttgagttccgatatgtttaccttcttctcaaaagcaatgcagtgtgtg
aggcaggagaagaataccgcaggcctggatcatattgttggagcaatgaatatcttctgc
aataagtttgctgtcaactgtcgcatacggatttgtaaaataggggaagaaattttgcct
acagtgctttatatatggactcaacatagaccaaaggattccttgaaggaatcaataatt
gagttatttcgtcttcaggttcatgttcatcatccaaagggtgcaaaaactcagggaata
ggtgcatatgactcagcaaaatggcacagtatcttacataacctgtatgatctgctggtg
aatgaaataaatctcatcagtagcagaggaaagtattcttcgggctcacgtaatattgct
gtaaaggaaaatttgattgagttaatggctgatatttgtcatcaggtttttacagcggat
accaaagttctggaaattagccactcgtatactgtttcccaaagagagtccagtgatgaa
acagtaccaagcaagcgcaggaggattgaactgggctgggaactaattcgagacaacctg
caaagatcacaggattttgatgtcataccttggttacagattacagctcagttaatatca
aagtatcccatgagtcttcctaacagtgagctgcctcccttactcaacgtacttcaccag
ttactgcctcagcagcgccggggagaaaggaccccatatgtgctgcagtgtcttacagag
gtagctttgtgtcaaaaccagaaaactgatttgaaaagcacccacaagctggagctccag
agaacctgggcaaagatttggtctcttactattcgtagcgtaagcttccagcaaattgaa
gtggagagctttgggctactcggagctatgattcaaggaaaccttgttgtaacagataaa
gaactctggaagatattttcaggacctgcatgcaagccttcaagttctgctgtatgttgt
ttagcattagtgatgtctgcctgttcagtgccaaaaaatttggatgtaggaatggaacag
aataattgtgaaagaaatctggattttgtgttaaaggaagcaataatgaaatgggtactg
tcctgccatttggaggaagaactggaagaatgtgcagagttgcctcctgtgctctgcagt
gattttcctcacctaatattacaaaaaattcttgtgagccttacaatgaagaactgtaga
gctgccatgagttttttccaaaatgatgctaaatgtgtgcaacacttgcaagggaaagaa
gaaaacaatttttctgatgttgaagagctgtatctgcagacgacatttgatgaaatggat
attttcactaactttgcagtaaatgttgcagataaaaatgcgactggttcaagacttgcc
atcaaccaaaatcttagggaaacactggagtactgtcttttagcaatgtcagaaaagctt
ataagcagctatactcctaagtctaaggtggttgctgcagaacaccttgtccgatgtgtc
ggtctcttgattggtgttcttggttgctattgctacactggtatatttaaagaagaggat
gcctgtaaatcaaagttgttccagactgctaagtctctcattcattatgctggagaaggc
atttcacagtctaaaaacaaactaaatgaagatgcccagatcaactcactgaggactttg
ataatgcagtgtacaaaatgtttatgcaattgtaccaagaacagtgctaataagatgctg
tctaatatattcctgcatttgttaacatcaaaatttatgaatgatcttgtagatatttgt
aaaaatctgatgacatttactggaaaaacagctgaactgggagaagcggatctaatgggg
aatgaccctgaggagagtataatggaagcagataaccaggtgtctgatgatctatttgat
gatcattcagtgactgacatcagtgatacaaacgaatccagtgagatgcaaaatgtaaca
ggtgctttgagcccattagctgaagaacagttgacaaagcaggatttacttctccttgaa
attctgaggttcttgtgtatttgtgtaactacagtccaaattcagacagtgagcttccga
gcctctgatatacggaggaagctgttaatgcttactgatggcagtgtctttgatggtgct
aagccattgcatctgcacatgtacttggtccttttgaaggagctccctactgaagaacac
ctcttgcctgaagatgatattcacatgcttcttaagcctcttcctgatgtgtgttctttg
taccgtcgagatcaagaagtttgtaaagtaattctaaataatttgcttccaatagcaata
gggttggcccagtccaatccacatgctgaagagacaagggatgctcgaggacaatttttg
acagttgttgaagccttttggcatttagctcaaggagggaaatgcacagcaccagtaaga
gtggcccttttaaactgcatgaaagccctgcttgaggctgatcctcattgcaagtgggcg
atccttaaagtgaaaaatgaagatctacctgtgagtgatactttcccacattttctcgca
gatagtcaccatcaagttcgcattcttgctgcaaagtcgattaccagtttgtttcaggat
gtgaaaaagagagattcttctggaatgtcaaaacctcttcctttgaagctccagcaaaag
gcttttgagaacgtttatctcagggttcaggaaggaatgagaaatctggtcagggatgat
gcaagtcctgaagatcttttggacaaacagtgtaatggaaaagcggttttgctgatgctt
ataaccatggttctgtgctgcagtccggtctgtgaaaagcaagctctgtttgctatttgc
cagtctgtgaaagagaatggattagatcctcagcttgtgaaaaaggttttgaaaaaaata
tctgacatttttggctataaaagtatagaagacttcatgacatcacatttagactatttg
gtgatggagtggctgaaaataaatgacagtggatatagcctgtctgcttttccttatgtt
cttctgaactatactagccttgaggaattctacaggtcttgttataaagttttggttcca
cacctggtgattagaagtcaatttgaagatgtgaaatcacttgccaacaagattgaaaaa
gactggaggcaggttctagcagactgttttccaaagatacttgtgaacatcctcccatat
tttgcctatcaaagccacggaaagagtgaagtagcagagcaaagagatacggcttctaaa
gtctacgacatgcttaaggatgaaaactgcttaggaaaacagcaaattgacaatttatct
cataataatttaccggagattgtggttgaactgttgatgacctttcatgaactacctgat
accacagcagaagcagcagctcatccaagtaaatacgtaagggaactggatcctgctcct
aatcctcctcattttccatcttatgtgattaaggcaaccttaaactatattagcaactgt
cataaaagcaaattaaaaagtcttgtagcagttctttctaaaagccctgattcattccag
aaaatccttctagccctttgtaagcatgcatcagatgcaaacaacatttacaagaaacac
agagttcttataatttatcacttattcgttagtctgttacttaaagagataaaagatggt
ttaggaggagcatgggcttttgtcctcagagatgtaatttacaccctgattcaccacatc
aatagcagacctgttattatcagagacatatccatgcgcagcttttcactctgttgtgat
cttcttcatcatgtttgccacacagcgattacgtgttgcaatgatgctctagagagccac
cttcatgttattgtaggaaccctaatacctcttgctgtggaccagcctgagattcaggaa
caggtcctaggcttgttgaagtatctggtgatagataacaaggataatgaaaatctgaat
catgcaatcaaatgcttagatccctttcctgaatatcctgcttttaaagatttgcgagca
gctcagcagaaaataaaatacagtgaaggaccatattctcttttggaggaaattaatcac
tttctctcagttggtgtttgtgattcactgcccttaacacgacttgaaggactgtatgat
ttacgcaaacaattggaacaatacaaagatcagatgaaggatctcctgaaaaatttccag
gaaaagcctgaagattctgtagtagtgaagttggtggtgagcttactgcagctgtccaag
atggcagttaaccgcagaggtgaaaaagcagtgctggaggctgttggaggttgcttggga
gaaataggtcccatggatttctccaccatagctcttcagcgtgctgaaaatgcactggat
tctaaagcagtggacttacttgaagatagaaaacttcagtgggtcttcataatgttaact
caaataaatactgctttaacagataattgtattgatgttagagctgctgctgtttcctgt
ttgaaaaacatattagccaccaagtctggcagtgaattttgggaagtttataaaaataaa
gctgatcccatgttaatctatctacagcccttcagaacgtctaggaaaaagttttttgta
gtacctgctaatgatacagaagctcctttagaaactttggatgacacaaacctgtggatt
cctctgggagaaagtcacgagacttggatcaagcacctgactagttcaatactggacagt
ggaggtgtgcaaaatgaagttctccagttaatgaagccactatgtgaggtgaaaacagac
ttgtgtcaaactttgcttccatacctgattcatgatatcctccttcatgacccagatgaa
tcttggagaaatcttttgtcagttcatatccagaagttttttacagcctgttgcagattt
gcctcatctagtagatctactacacctccaaattctgattcagagcaagaaacccagaat
tttagaagtttggataaagtatctcgacgagccatgcttgctgttgttgattacttaaga
agacaaaagagatctgtttcaggtacagtttttgatgacagcttctggctaaagctgaat
tatctggaggttgctatagcagcacagtcttgtgctgctcacttcacagccttgctctac
acagaaatctacgcagacaagataaatatagacaaacagcaagaaaggtcatcttttaaa
gcagctaagagtttgtcatttgaagaggaaagtcaaagaacaactattactcttttgaat
gaaaaaagcaaagaagaaactggcataagtttacaggaccttctcatggacatatataga
agcattggagaacctgacagtctctatggctgcggtggaggaagaatgttgcagccatta
gcacggataagaacatacgagcatgaagcagtatgggagaaagcccttgtaacatatgac
cttgaggcaagcctctctccatctactcgccaggcaggaataatagaggctttgcaaaat
tttgggctttgccacactctttccatgtatttaaaaggactggaacatgaaaacactgag
tggtgtgcggaactacaggaaatacgctaccaggcagcatggaggaacatgcagtggggc
cacatctcttctgtcaaagatgagacaggaagaccagggtaccatgaatcattgtatgat
gctcttcagtctttacgagataaggaattctctgctttctatgacagtcttaaagatgcc
agagtgaatgaagtagaagagctgtgcaaaggcagccttgagtctgtttattcattatat
ccaactctttgcagactacagctaattggagagttggaaaatataggtctgctgttctcc
agatctgttactactcaacaactgaatgatacttatttgaaatggcagagacagtcccag
cttctcaaggacagtgacttccgtttccaggaacctatcatggctctgcgcactgtaatt
ttggagatattgctcgaaaaggagaatgaaaataccaaaagagaatgtattaaagacatc
ctgaccaaacatctagtggatctctctagattggcaagaactgctaaaaatacacagctt
ccagaaagagctatgtttcagatcaaacaacacaatccaatgggacatggagtttctgaa
tggcaactagaagaagctcaggttttctgggctaaaaaggaagagagtcttgcgctgaat
attcttaaagggatgataaaaaagttagatgcagattggtttcaggttgagaatgatcct
catctgaagttgatatatacagagtgcctgaggctatgcggaacctggttagcagaaaca
tgcttggaaaaccctacagtcatcatgcagaaatacttagaaaaggctgtggaaattgct
gcaagccacggtggagacggcagcgatgagctgaagaaaggaaagatgaaggctttcctg
tctttggctcgtttctcagataatcagtaccagcgaattgagaattacatgaaatcctca
gagtttgaaaataagcaggcattactgaagaaggccaaggaggaggtcggcctcatcagg
gagcgtaaagttcagacaaatagatacacagtgaaggttcagcgagaactggaactggat
gaatgtgccatacacgccctaaccgaggatcgcaaacgcttcttgtgtaaagcagtggag
aactatatcagctgtttactaagtggagaagaacatgacatgtggatctttcgactctgt
tccctatggcttgaaaattctggagttgataaagtcaatgaaatgatgaagaaaaatgca
gagaagatcccttcatacaagtttttgcccctgatgtaccagctggctgctcggatggga
accaagatgatgggtggtttaggatttcatgaagttctgaataatctaatgtctagaatt
tccctggatcatccacatcatactttgtttataatattagctttggcaaatgctaacaaa
gatgaactcctcacaaaaccagatgcaataagaagaaataagttaattaaaaatgcaccg
aaagaaatctcccagcttgatgtggacagaatgaaggctgctagcaacataatcaatatc
gtaagaaacaggagagcttgtatggttagaggcgttgaagcactttgtgatgcgtacatc
acattagcaaatctagatgctagtccgtggaaatctcaaagaagaggagtaagtattcca
gctgaccagccaattattaaactgaagaacttgaaggatgttgttgttcccaccatggaa
attaaggtggatcccacaggacaatatgaaaatttggtgacaatacagtcttttaaacca
gaatttcgcttagcaggaggcctgaatctgcctaaaataatagattgtgtaggatcagat
ggtaaagaaaggaggcagctggttaaggggcgtgatgacctgagacaagatgctgttatg
cagcaggttttccagatgtgcaatacattgctccagcaaaacactgaaacacgaaagaga
aaattaactatccgaagatacaaggtggttcccctttctcagagaagcggcgttctcgag
tggtgctcgggaacaactcccattggggagttcctggtcaacgtcgaagagggagctcac
aagagatacaggccaaaagattactccagctatgagtgtcagaaaatcatgatggatgca
caaaagaaacattttgaagagaaatacaacatcttcatgaaagtctgcgagaatttccaa
cctgtgtttcgttatttctgcatggaaaaattcctggatccagctgtgtggtttgaaaaa
cgattggcatatactcgcagtgtggctacatcttctatagttggctacattcttgggctc
ggagacagacacgttcagaatatcttgatagatgagcaaactgcagaactagtgcatata
gatctgggggttgcttttgagcaaggcaaaatccttcccacgccagagactgttccattt
cgattaaccagggacatcgtggatggaatgggtatcactggcgtggaaggagtcttcaga
agatgctgtgagaaaacaatggctgttatgagaaattctcaagaagctttgctgactatt
gtagaggtgctgctctatgatccgctttttgactggaccatgaaccccttgaaagctttg
tatttgcagcagagaccggaggacgaggctgacataagctcttcgctccatgctgaccca
caagaatgtaaaagaaaagccagcagtgatgaccagagttttaacaaagtggctgagcgt
gttctgatgagacttcaggagaagctgaaaggtgttgaggagggaacggtgctcagcgtg
ggagggcaggtgaacctcctcatacagcaggccatggacccgaaaaatctgagcagactc
tttcctggctggaaagcttgggtctga

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