Chroicocephalus ridibundus (black-headed gull): 134513579
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Entry
134513579 CDS
T10910
Symbol
GEN1
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crid03400
]
134513579 (GEN1)
DNA repair and recombination proteins [BR:
crid03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
134513579 (GEN1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Motif
Other DBs
NCBI-GeneID:
134513579
NCBI-ProteinID:
XP_063186591
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Position
3:116849849..116873705
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AA seq
954 aa
AA seq
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MGVTNLWQILEPVKQPVNLSSLKGKTLAVDLSLWVCEAQTVKKMIGVVTKPHLRNLFFRY
SFLTSMGIKLVFVMEGEAPKLKADTMSKRNEMRYGPSKKVGAARTGRSLFKAILKECLEL
LECLGVPWVQAVGEAEAMCAYLNAKGHVDGCITNDGDVFLYGAQTVYRNFAMNAKDPVLD
CYTMSSIKEKLGCDRESLIGLAVLLGCDYLPKGVPGVGKEQALKLIETLRGQNLLQRFEQ
WKEQFQYGNNPPLVVKRVTHCSECHHPGSYKEHEHNGCKFCESTRSCKPNDSRYCCPCEW
HQLERMKQASAVEDNIRKKANSCEGFPFSEVIQEFLVNKNKLIKIKECQRPNLLSFQIFA
SEKMEWNKHYACKKLLALLTHYDMMQRKSGIIDSKQLQAIRIVKTRVKSGIPCFEIEWQK
PEHYVDAEDEPAELFVVTVEESSLFQAAYPDLVALYQVEKSDVMKKKQKNRKDRPKEKEL
PKVYDEVSDLLSQMNLKSRCEILPVQDSSSDIKTPAENQIHQRSTESKDLVLATASCITT
LQTPASAAALPPTASPYSLSQSMFADSSVLAAQLTENSRISSPSSVIAGLQLSSIDWEAT
SFSTSSARGGDTHDPAAELTTYIKDSHALGHETVRNSSEYSDAAQSDQHHSVIDLISDDA
MGQIEKWSLSERILKKTSIPSKPLLSEGVMQLESLKHFKQTKETLHHDKDYISSSCQLNK
LVQESKNVLSEDCSRESSVHIYQHQYKKADSLDEMMQKDRNLNSSTPLALSGKTTETLHP
GCEVPPVSQKPADIVTGGHIKKACTQTTWKSSFKKSVCQNRYSSSEDSDDDNMNKKQIYK
QQNSQLNPGQFKKRFTKERSDAVTSKRTNSDSALLIKEEKKKSNLKKAGNSLSLQVSPKP
SSVGEVNCFQSPEQPFERSGSGPTQRAESAVPAFAWADSPLPLSERLKRRININ
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgactaatttgtggcaaatccttgagcctgtgaagcaacctgtcaacttgagc
agtctcaaaggaaaaacactggctgttgatttaagtctgtgggtttgtgaagcacagact
gttaaaaagatgattggagtagttaccaagccacatctgagaaatctattttttcgatac
tctttcttgacatcaatgggaattaaactagtttttgtcatggaaggagaagctcccaag
ttgaaagcagacactatgagcaagaggaatgagatgcgctatggaccttcaaagaaagtt
ggagctgcaagaaccgggagatctttatttaaagcaattttaaaagagtgtcttgaactg
ctggagtgtttaggtgtcccttgggttcaagcagtcggggaagcagaggcaatgtgtgcc
tacctgaatgcaaaaggacacgttgatggctgcattaccaatgatggagatgtcttcttg
tatggagctcaaacagtttataggaactttgccatgaatgctaaggatccagttcttgac
tgttacacaatgtcctctattaaggagaagcttggttgtgacagagagtctttgattggg
ctagctgttcttctgggttgtgattatcttccaaagggcgttccaggagttggtaaagaa
caagctttaaagttaattgagactttgagaggtcaaaacttattgcaaaggtttgagcaa
tggaaagaacaattccagtacggtaataatccacctttggttgttaaaagggtaactcac
tgttctgagtgccatcatccaggatcttacaaggaacatgagcacaatggatgtaaattc
tgtgaaagcactagatcctgcaaacccaatgactccagatactgctgtccttgtgaatgg
catcagttagagcgaatgaaacaagcaagtgcagtggaggacaatatcagaaaaaaagct
aacagttgtgagggctttccattctctgaggttatccaagaatttcttgtaaacaagaat
aaattgatcaagataaaagaatgccaaaggccaaatttattgtcctttcagatctttgct
tctgagaagatggaatggaacaaacattacgcttgtaagaaattgttagcgctattgaca
cattatgatatgatgcagagaaaatctggaatcattgattcaaaacaactgcaggcaata
cggatagtcaagacacgtgttaaaagtggaattccttgttttgaaattgagtggcaaaag
ccagagcattatgttgatgcagaagatgagcctgcggagttgtttgtagtcacagtagaa
gagtcgtctttgtttcaggctgcttatcctgatctcgttgccctttatcaagtagaaaag
tcagacgttatgaagaagaaacagaaaaacaggaaagacagaccaaaagaaaaggaatta
ccgaaagtttatgatgaagttagtgatcttctgtctcaaatgaatttaaaatctagatgt
gaaattcttcctgtgcaagactcctcatcggatataaaaactcctgcagaaaatcagata
caccagaggagtactgagtcaaaagatctagtactagctacagcttcctgcataacgact
cttcagacaccagcatcagcagctgctcttcctccaactgcatcgccttactcgctctca
cagagtatgttcgctgactcatctgtattggcagcacaacttactgaaaattcaaggata
tcatccccttcgtctgtaatagctggtctacagctgagcagtattgattgggaagcaacc
tccttcagcacttcgtcagcccgtgggggtgatacccatgatccagcagctgagttaacc
acatacataaaagactcacatgcactgggtcatgaaacagtaagaaacagctcggaatat
tctgatgctgcgcagtctgatcaacatcattctgtaattgatttgatttctgatgatgct
atgggtcagattgagaagtggtctttaagtgagcgcatacttaagaagacttccattcca
tcaaagcctttgttgtctgaaggtgtaatgcaactggagtctttgaaacattttaaacaa
acaaaagaaacattgcatcatgataaagattatatctcttcctcatgtcagttaaataaa
ctagtgcaggaaagtaaaaatgtgctatcagaagactgttcaagggaatccagcgtacac
atttatcaacatcagtacaaaaaagctgacagcctggatgaaatgatgcaaaaagaccgt
aatttaaacagttcaacacctctagccctcagtggtaaaacaacagagactctgcatccg
gggtgtgaagtgcctccagtgtctcaaaagccagcagacattgtaactggcggtcacatt
aaaaaagcttgtactcaaactacttggaaaagttcctttaaaaagagtgtgtgtcagaac
agatattcttctagtgaagacagtgatgatgataatatgaacaaaaaacagatttataag
cagcagaacagtcagctgaaccctggtcagtttaaaaaacgtttcacaaaggaaaggagt
gatgctgttactagcaaaagaacaaacagtgactcagcccttttaattaaagaggagaag
aaaaagagcaatttaaaaaaagctggtaatagtttgtcattgcaagtatctccaaaacca
tcctctgtcggggaagttaattgtttccaaagtccagagcaaccgtttgagaggtcaggt
tctggtcccacgcaacgagcggaaagtgctgttccggctttcgcatgggcagacagtccc
cttccgctgtctgaaagactaaaaagaagaatcaacatcaattag
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