KEGG   Chroicocephalus ridibundus (black-headed gull): 134513632
Entry
134513632         CDS       T10910                                 
Symbol
CDC5L
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
crid  Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:crid00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    134513632 (CDC5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:crid03041]
    134513632 (CDC5L)
   03400 DNA repair and recombination proteins [BR:crid03400]
    134513632 (CDC5L)
Spliceosome [BR:crid03041]
 Complex B
  Other components
   Prp19 complex
    134513632 (CDC5L)
 Complex C
   Prp19-CDC5 complex
    134513632 (CDC5L)
DNA repair and recombination proteins [BR:crid03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    134513632 (CDC5L)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect Rap1_C
Other DBs
NCBI-GeneID: 134513632
NCBI-ProteinID: XP_063186713
LinkDB
Position
3:complement(123705803..123741447)
AA seq 803 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKAAQRDNEEETADDP
RKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIEIQKKRKKKRGVDYNAEIPFEKKPAPGFYDTSEENYQSLDADFR
KLRQQDLDGELRSEREGRERKKDKQHMKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAP
QISDTELEEVVKVGQASEIARQTAEESGITNSASSTLLSEYNVTNNSIALRTPKTPAAQD
RILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQKQVVQTPNTVLSTPFRTPSHGP
EGLTPRGGLTPKPVAGTTPGRTPLRDKLNINPEEGMADYSDPSYAKQMERESREHLRLGL
MALPAPKNDFEIVLPENAEKELEEHEVDETFVEDTADIDARKQALREAERAKELKRMHKA
VQKNLPRPSEVNETILRPLNVEPPLTDLQKSEELIKKEMITMLHFDLLHHPFGEQPSGKK
GKGPGFGSNNAEHMAYLEQNPYEKFSKEDLKKAQDLLAQEMEVVKQGMGHGELSSEAYNQ
VWEECYSQVLYLPGQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKLKI
LLGGYQSRAMGLIKQLNDLWDQIEQAHLELRTFEELKKHEDAAIPRRLECLKEDVQRQQE
REKELQQRFADFMLDKETFQAKY
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgccgcggattatgattaaaggcggcgtgtggcgcaacaccgaggatgaaattcttaaa
gcagctgtgatgaaatatggcaaaaaccagtggtctcgtattgcttctttattgcataga
aaatcagcaaagcagtgcaaagccagatggtatgaatggctagacccgagcatcaaaaag
acagagtggtcacgggaagaggaggagaaactgttgcacttggccaagctaatgccaacc
cagtggagaaccattgccccgattattgggagaactgctgcacagtgtttggaacactat
gaatttctgctggacaaagctgctcagagagacaatgaagaagaaactgctgatgatcct
cggaaacttaaacctggagaaattgatccaaatccagaaaccaaaccagccaggccagat
cctattgacatggatgaagatgaacttgaaatgctgtctgaagctagagctcgtctggct
aatacgcagggaaagaaggccaaaagaaaagcaagagagaagcaactggaagaagctaga
cggcttgctgctctccagaaaagacgagaacttcgggctgctggaattgagatccagaag
aaaagaaaaaagaagagaggtgtggattataatgcagaaattccatttgaaaagaagcct
gcccctggtttttatgatacatcggaggaaaactaccagtccctggatgcagatttcagg
aagctacgtcagcaagacttggatggagaattaagatctgaaagggagggaagagagcgc
aaaaaagacaaacaacatatgaaacgcaaaaaagagtcagacctgccttcagctattcta
cagaccagtggagtgtcagaatttaccaaaaaaagaagtaaactagtgcttccagctcct
cagatctctgatacagaacttgaagaagttgtaaaagtaggccaggcaagtgagattgca
cgccagactgctgaggaatctggaattacaaactcggcttccagcacccttctgtctgag
tataatgtgaccaacaacagcatagcactaaggactcctaaaactccggcagcacaggac
aggatcctgcaggaagcacagaatttgatggctctcactaatgtggatacccccctgaaa
ggaggtcttaacacacccttgcatgaaagtgacttttcgggggtgacaccacagaaacag
gttgttcagactccaaatactgtgctttccacacccttcagaacgccttctcacggacct
gaaggcttaactcctcgtggaggactaactcctaaacctgtggctggtacaactcctggt
agaactccactgcgtgataaattgaacatcaacccggaagagggaatggcagattacagt
gacccatcttatgcaaaacaaatggagagagagtctcgtgagcacctgcgcctcggactc
atggcccttcctgctccaaagaatgactttgagattgttttacctgaaaacgcagaaaaa
gaacttgaggaacacgaagtagatgaaacctttgtagaagatactgctgatatagatgcc
cgcaagcaggctctccgagaggcagagcgtgcaaaggagctgaaaagaatgcacaaagct
gttcagaagaatctaccacggccctcagaagttaatgaaacaatactgagacccttaaat
gtggaaccacctctaaccgatttgcagaaaagcgaagagctaataaagaaagagatgatt
actatgcttcattttgatcttttacaccacccatttggagaacagcctagtggtaagaag
ggaaaaggcccaggatttggaagcaacaatgcagaacatatggcttacttggaacagaac
ccttatgagaagttctccaaagaggatctcaagaaggcacaggatctgctggcgcaagag
atggaagtggtaaagcaaggaatggggcatggagagctctcaagtgaagcttataaccag
gtgtgggaagaatgttacagccaagtgttgtacctgccgggacagagccgctacacaaga
gctaacttggccagcaaaaaagacaggatagagtcacttgaaaagaggcttgagataaac
agaggtcacatgacaactgaagcaaagagggctgccaagatggagaagaagctcaagatc
ttgcttggtggttatcagtctcgagcaatgggcctcatcaaacagttgaatgatttgtgg
gaccagatcgaacaggcacatctggagctacgtacttttgaggaactgaagaaacatgaa
gatgctgcaatcccacggagactggagtgtctgaaggaagatgtgcagcgacagcaggag
agagaaaaggagctccagcagagatttgctgacttcatgttggataaagagacttttcaa
gcgaagtattag

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