| Entry |
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| Symbol |
IFT88
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| Name |
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
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| KO |
| K16474 | intraflagellar transport protein 88 |
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| Organism |
crid Chroicocephalus ridibundus (black-headed gull)
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| Brite |
KEGG Orthology (KO) [BR:crid00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:crid03037]
134513814 (IFT88)
Cilium and associated proteins [BR:crid03037]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
134513814 (IFT88)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1:22416869..22463488
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| AA seq |
823 aa
MFHRKMMQNVHLAPEADEDDLYSGYNDYNPTFDTEDLENDVAFQQAARTSHGRRPPVTAK
IPGTSASRPLATGFGSKATLTSSMGRPMTGAIQDGVARPMTAVHAAGYTKAAMRGSSFDP
LGQARGPAPPLEMKNSDSSEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKEAGRKE
RVLVRQREQIATPENINLDLTYSVLFNLASQYAANEMYAEALNTYQVIVKNKMFSNGGRL
KVNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVAFIKTGQYVDAISSF
EQIMSMSPNLKAGFNLIVCYFAIGNTEQMKKAFQKLIAVPLEVDYDDKYISPNDDPHTNL
LIEAIKNDSLRQIERERKSMAEEYIMTAAKLIAPVIETSFAVGYDWCVEVVKASHYVELA
NDLEINKATTYLRQQDFNQALETLKMFEKKDSRVKSAAATNLSFLYYLENELAQATNYAD
LAVNSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNLGLTYKKLNRI
DEALDCFLKLHAILRNSAQVLHQIASIYEIMEDPNQAIEWLLQLISIVPTDPHVLSKLGK
LYDNEGDKSQAFHYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIEYFERAALILPTEV
KWQLMVASCYRRSGNYQKALEKYKVIHRKFPENVECLRFLVRLCTDMGLKEVQEYVTKLK
KVEKLKEIREQRIKSGRDGSARSRREGNAGGDSGGTKGERLSVKLKALPGTSEPYESSGS
KEIDASYIDPLGPQAERPKTAARKRTEEDDFADEELGEDLLPE |
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| NT seq |
2472 nt +upstreamnt +downstreamnt
atgtttcacagaaaaatgatgcaaaatgtgcatctggctcctgaggctgatgaagatgat
ctttattctggctacaatgattataaccccacgtttgacacagaggatttagaaaatgat
gtggcttttcaacaggcagcaagaacaagtcatggtagaagacctcctgtgacagccaaa
attcctggtacatcagcttcaagacctttagctactggatttgggtcgaaggcaacttta
acttcatctatgggaagaccaatgacaggagctatacaggatggggttgctcgaccaatg
acagcagtgcatgctgcaggttacactaaggccgctatgagaggttcttcatttgatcct
cttggccaagcaaggggtcctgctccacctctggaaatgaaaaattcagacagttcagaa
gagaagattaggcagttggaaaaaaaagtgaatgaactggttgaagaaagctgcattgcc
aacagctgtggagacttgaaattggctctggaaaaagcaaaagaggctggaagaaaggaa
agagtattggtgagacaacgtgaacaaattgctaccccagaaaacatcaacttagacctc
acttactcagttcttttcaatctggccagtcagtatgctgctaatgaaatgtatgctgaa
gcactgaatacttatcaagttatagtgaagaataagatgttcagcaatggaggtagactg
aaggtgaatatgggaaatatatatttaaaacaacggaactattccaaagctatcaaattc
taccgtatggctctagaccagattcctagtgtccacaaagaaatgaggattaaaataatg
caaaatatcggagttgcattcattaaaaccggccaatatgttgatgccatttcttcattt
gaacagataatgagcatgtccccaaacctgaaagcaggcttcaacttgatcgtatgttat
tttgctattggaaacactgagcagatgaaaaaagccttccaaaaactgattgcagttccc
ttggaagtggattatgatgacaaatacatatcaccaaatgatgatccacatacaaatcta
ctgattgaagccattaaaaatgacagtttaagacaaatagaacgtgagaggaaatccatg
gcagaggaatacatcatgacagctgctaaactcattgcaccagtaattgagacgtctttt
gcagtgggctatgactggtgtgttgaggtagtaaaagcttcccactatgtagagttagcc
aatgacctggaaataaataaagcaactacttacttgaggcaacaggattttaaccaggca
ctggagactttaaaaatgtttgaaaaaaaggacagcagagtaaagagtgcagctgcaaca
aacctttccttcctttactatttggaaaatgaattggcacaagcaactaactatgcagat
ttagctgtaaattctgataggtacaatccagcagctctaactaacaaaggaaatactgtt
tttgcaaatggagactatgaaaaagcagcggagttttataaggaagctctcaggaatgat
tcctcatgcactgaagcactctataatcttggtttaacatacaagaagttaaacagaata
gatgaagctttggattgttttctgaaactccatgcgatccttcgaaatagtgcccaagtc
cttcaccagatagcaagcatatatgagatcatggaagatcccaatcaagccattgagtgg
ctcctgcagttgatcagcatagtaccaactgatccacatgtactttcaaagctagggaaa
ttatatgataatgaaggtgataaatcccaagcttttcattattactatgagtcataccgg
tatttcccttcaaacattgaggtcattgaatggctgggagcctactacattgacacccag
ttttgtgaaaaagccattgagtactttgaaagagcagcacttatcctaccgacagaagtg
aaatggcagctgatggttgccagttgctacaggagaagcggtaattaccagaaagcacta
gagaaatacaaagtcattcacagaaaattcccagagaatgttgaatgcctccgattttta
gttcgtctctgcacagatatggggctgaaagaagtccaggaatatgtgacaaagctcaag
aaagtggaaaaattaaaagaaataagagagcagcgcattaaatctggcagagatggcagc
gcacgtagccgcagagaaggaaatgctggtggtgatagtggtggtaccaaaggagaaaga
ctgagtgtcaaactaaaagctttgcctggaacaagtgaaccctatgaaagcagcggcagt
aaagaaatagatgcctcctacatagatccacttggcccacaagcagaaagaccaaaaact
gcagcaagaaaaagaactgaggaagatgattttgctgatgaagaactaggagaggatttg
cttccagaatag |
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