Chroicocephalus ridibundus (black-headed gull): 134514066
Help
Entry
134514066 CDS
T10910
Symbol
COPB1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crid04131
]
134514066 (COPB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crid04147
]
134514066 (COPB1)
Membrane trafficking [BR:
crid04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
134514066 (COPB1)
Exosome [BR:
crid04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
134514066 (COPB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
HEAT
HEAT_2
Cnd1
HEAT_EZ
Arm
MMS19_N
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
134514066
NCBI-ProteinID:
XP_063187388
LinkDB
All DBs
Position
4:complement(14445112..14463054)
Genome browser
AA seq
953 aa
AA seq
DB search
MTAAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKLKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPSHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDNNEAAAADV
LEFVREAIQRFDNLRPLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVESEIKKETGELKPEEEVSVGPAQKLVTEMGTYATQSALSSSRPAKKEEDRP
PLRGFLLDGDFFVAASLATTLTKIALRYVSLVQEKKKQNSFIAEAMLLMATILHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSHMLSAKLEEEKLSQKKESEK
RNVTVQPDDPISFMQLTAKNEMSSKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPASCTDAEF
RQMWAEFEWENKVTVNTNIVDLNEYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSI
FGEDALANVSIEKPIHLGPEAPVTGHIRIRAKSQGMALSLGDKINLSQKKTSL
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgcagagaacgtgtgttacacgttaatcaatgttccgatggattcagaacca
ccttctgaaatcagcttaaaaaatgacctagaaaaaggagatgtcaaattgaagacggag
gccttgaagaaagtaatcattatgattctgaatggtgaaaaactacccgggcttctgatg
accattatacgttttgtactgcctctgcaagatcatactatcaaaaaactgctgcttgtc
ttttgggagatagtgccaaagaccactccagatggcaggcttttgcaagaaatgatcctt
gtgtgcgatgcatacagaaaggatcttcagcacccaaatgaatttatccgaggctctact
ctccgttttctttgtaagctgaaagaagcagaactgttggagcctttgatgccggccatt
cgtgcatgtctagaacatcgtcacagctacgtgcgcagaaatgcagttcttgcaatttac
acgatttatagaaattttgaacatcttatacctgatgctcctgaactgatccatgatttc
ttggtgaatgagaaagatgcaagctgcaaaagaaatgcatttatgatgctaattcatgca
gatcaggatcgagctttggattatttgagtacctgtattgaccaagtccagacatttggt
gacatactgcagttggttattgttgaactgatttataaggtgtgtcacgcaaatccatca
gagagagctcggtttattcgctgcatctacaacttactgcagtcgtcaagtcctgcagtg
aagtatgaagctgcaggtactctagttacgctttccagtgcaccaacagcaatcaaggca
gctgcccaatgctacatagatttgattattaaagaaagtgataataatgtgaaactgatt
gttttggatcggctgattgaattaaaggagcatccctcccacgaacgagtattacaggat
ctagttatggacatcctcagagtgttgagtaccccagatctagaagtgcgcaaaaaaacc
cttcaactggctctggatcttgtctcttcaagaaatgtggaggagcttgtgattgttctg
aagaaggaagtgattaaaaccaataatgtgacggagcatgaagatacggacaagtataga
cagctgcttgttcgtacattgcattcctgtagtgttcggtttccagatatggctgcaaat
gttattccagtgctgatggagttcctcagtgataataatgaagcggcagctgctgatgtt
ttggagtttgtgcgggaagcgatccagcgatttgacaacctcagacctcttattgttgag
aagatgcttgaagtctttcacgctattaaatctgtcaagatttatcgaggagctttatgg
atccttggagagtattgcagcacaaaggaggatatacaaagtgttatgacagaagttcgc
agatcacttggagagatcccgatagtagaatctgaaatcaagaaagaaactggtgagcta
aaacctgaagaagaggtgtctgtgggtccagcccaaaaattggtgacagagatgggcact
tatgcaacacagagtgctctcagtagttcccgacctgccaaaaaggaagaagacagacct
ccgttacgaggattcctgcttgatggcgatttctttgtggcagcttctcttgctacgact
ttaactaagattgctttacgatatgtgtcactagttcaggaaaagaagaaacagaattcc
tttattgctgaagctatgctgctgatggccactattctccatttgggaaagtcctctctt
cccaagaagccgattacagatgacgatgtggatcgtatttccctgtgtctgaaagttttg
tcagaatgttctcctctcatgaatgacattttcaacaaagaatgcaggcagtccctctct
catatgctgtcagccaagctagaagaggagaaactttcccagaagaaagaatctgagaag
aggaatgtgacggttcagccagacgatcccatttccttcatgcagcttactgctaaaaat
gaaatgagctcaaaagaagaccagtttcagcttagccttcttgcggcaatgggaaacaca
cagaggaaagaggctgctgatcctcttgcatccaaacttaataaggttactcaactgaca
ggtttctcagaccctgtctatgcggaagcgtatgtccatgtcaatcagtacgacattgtg
ctggatgtgcttgtggtgaaccagaccagtgacactctgcagaactgcacactggaacta
gccacgctaggtgacttgaaacttgtggaaaaaccatctcctctgacactcgctccacat
gactttgcaaacattaaagccaatgtcaaagtcgcttcaacagaaaacggaataattttt
ggtaatattgtgtatgatgtctctggagcagccagcgacagaaactgtgtggttctcagt
gatattcacattgacatcatggattacatccagcctgcttcttgtacggatgcggagttt
agacagatgtgggcggaatttgagtgggaaaacaaagttacggtgaataccaacatcgtt
gatctaaatgaatacttacagcacatactgaagtcaaccaatatgaaatgcctgactcca
gagaaggcactttctggttattgtggctttatggcagccaatctttatgcgcgttccata
tttggagaagatgcacttgcaaatgtcagcattgaaaagccaattcatcttggaccagag
gcacctgtcactggtcacatacgaatccgcgccaagagtcagggaatggccctgagtctt
ggagataagatcaatttgtctcagaagaaaacaagtttataa
DBGET
integrated database retrieval system
