Chroicocephalus ridibundus (black-headed gull): 134514264
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Entry
134514264 CDS
T10910
Symbol
UBR1
Name
(RefSeq) E3 ubiquitin-protein ligase UBR1 isoform X1
KO
K10625
E3 ubiquitin-protein ligase UBR1 [EC:
2.3.2.27
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crid04121
]
134514264 (UBR1)
Enzymes [BR:
crid01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134514264 (UBR1)
Ubiquitin system [BR:
crid04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
134514264 (UBR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRT6_C
UBR1-like_wing
zf-UBR
ClpS
Motif
Other DBs
NCBI-GeneID:
134514264
NCBI-ProteinID:
XP_063187873
LinkDB
All DBs
Position
4:43623313..43691240
Genome browser
AA seq
1761 aa
AA seq
DB search
MADGGNGGPGAAAAGAAGGRVHAQPQERAMWCDERFNFQATFLQCLAKHVPNIYSAEMDP
LLEKQEEMVQAAVLYPLECYLFGEDPDMFLEKLQQSGTSQLCGKVFKGGETTYSCRDCAV
DPTCVLCMDCFQNSIHKNHRYKMHSSTGGGFCDCGDTEAWKAGPLCTKHEPGASGSAKEN
SECQLNEEIMEHSRRVFPAVIKYIVDMLIWEEEKELPPELTISREKVDSYYCVLFNDEHH
SYDHVIYSLQRALGCELGEAQLHTTAIDKEGRRAVKAGHYTSCQEAKEEIKRHSENVSQR
PLHVEVLHADVMAHQKFALRLGSWLNKLMSYSSDFRQIFCQICLKEEAGSENPCFISKLM
LWDAKLHKGARKVLHELIFSSFFMEMEYKKLFAVEFVKYYKALQKEYISDDHDRALSVTA
LSVQMFTVPTLARHLIEEQNVITTITETLLEVLPEYLDKNDKFNFQGYSQDKLNRVYAVI
YDLRYVLVSKPTLWTDRLRARFLEGFVSFLRILTCMQGMEEIKRQIGQHIEVDPDWEAAI
AIQMQLKNILLMFQEWCACDEELLLRAYSECHKAVMRCSTNGRSREKTVFHLCGHTLESR
PYRVSADPVSIHLPLSRTLAGLHVRLSKTGTISRLHEFVSPEEFQVELLVEYPLRCLVLV
AQVAAEMWRRNGLSLISQVFYYQDVKCREEMYDKDIIMLQIGASLMDPNQFLLLILQRYE
LADTFKKLKPTKDQDLIKQCNVLIEEMLQILIYVVGERYVPGVSNVTKEDVTMREIIHLL
CIEPMAHSAITKSLPENENNETGLENVIDRVATFKKPGVSGHGVYELKDECLKEFNMFFY
HYTKTQHSKAEHTQKKRRKQENRDEALPPPPPPDFSPAFSNVVRILNCDVMMHILRTILQ
RAVELETHLWTEAMIQMVLHLLSLGLLEEKQQLQKSPEEEVTFDFYHKATRMGSSALNAV
NVLMLLEKLKRVPQLEAQKDTVNWILQMFDTVKRLREKSSLTTVAATSGSEATKGDETQS
SQDKEKAERKRKAEAARLHRQKIMAQMSALQRNFIETHKLLYENTLEAQGKEDSIMEEES
MSSAIDYSRIALGPKRGPSVAEKEVLTCILCQEEQEVKLESAAMVLSACVQKSTALTQNR
SRILELSGETLDPLFMHPDLPCGTHTGSCGHVMHAACWQKYFEAMQLNFRQRLHVEQIFD
LENGEYLCPLCKSLCNTVIPIVPLQAQKINSEDAEAVAQILSLARWLEIITVRISGYSVK
NAKGEKQSLPAFTNKGMGNSALEFHSILSFGVQSSAKYSSSIKEMLILFATTIYRVGLKV
APNEADYRIPMMTWSTCAFTIQCIENLLETEGKPLFGSLQNRQHSGLKALVQFAAAQRTT
SPQVLIQKHLIRLLGVLLPNFKVEDTPSLLEVDMFHILVGVVLSFPSLYWEDAVDLQPSS
ISSAYNHLYLFHLTTLAHITQIVVSSATESPTARSSDNSEEAQSAQSFCREICQYTSGCF
SQDIPGWLVWDCVKKGIMPFLRCAALFFHYLLGVSPPEELLQVSEEGQFKALCSYLSLPT
NLFLLFQEYWDTVNPLLQRWCADPVVLSCLKGKSIAVRYPRKRNSLIELPEDYSCLLNQA
SQFRCPRSSDDEQKHPVLCLFCGAMLCSQNTCCQELVNGEELGACTSHALQCGAGVCMFL
KIRECKVVLIEGKTRGCLYPAPYLDEYGETDPGLKRGNPLHLCRERYRKLHLLWQQHCII
EEIARSQETNQIFFGFNWQLL
NT seq
5286 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggcaacggagggcccggagcagcagcggcgggagcagcgggcggcagg
gtccacgcgcagccccaggagcgagccatgtggtgtgatgaaagattcaacttccaagct
acgtttttacagtgcttggcaaaacatgtgccaaatatttactcagctgaaatggacccc
ttgctggagaaacaagaagaaatggtccaggcagcagtattataccccctggaatgttat
ttgtttggggaagacccagatatgttcctggagaaactacaacaaagtggaacctcacag
ctctgtgggaaggtgttcaaaggaggggagacaacgtactcttgcagagactgtgcagtt
gatccaacttgtgtactctgtatggactgcttccagaatagcattcacaagaaccaccgg
tacaagatgcatagctccactggaggcggattttgtgactgtggggatacagaggcatgg
aaggctggaccgctgtgtactaaacatgaacctggagcatcaggttctgcaaaagaaaat
tctgaatgtcagttgaacgaagaaattatggagcactctaggagagtgtttcccgctgtg
ataaaatacattgtagatatgcttatatgggaagaagagaaggaactgcctccggagctc
acaattagtagagagaaggtagacagctactactgtgtccttttcaatgatgaacatcat
tcttacgatcatgtcatctatagcctgcaaagggcacttggctgcgaactcggtgaagcc
cagttgcatactactgccatagataaagagggtcgtagagctgttaaggcaggacattac
acctcttgtcaggaagcaaaagaagaaatcaagaggcattctgaaaatgtttctcaacga
ccacttcatgtggaggttctgcatgctgatgttatggctcaccagaagtttgccttgcgc
cttggttcttggctgaacaaactcatgagctattcaagtgacttccgccagatcttttgt
caaatatgtctcaaagaagaagctggatctgaaaacccatgtttcataagcaagttgatg
ctatgggatgcaaaacttcataaaggggcaaggaaggttcttcatgaacttatcttcagt
agttttttcatggaaatggaatacaaaaaactttttgctgtggaatttgtgaagtattac
aaggcattgcaaaaagaatacatcagtgatgatcatgatagagctctctctgtgacagca
ctctcggttcagatgttcactgtacccactctggcccgacatcttattgaagagcagaat
gtaatcaccaccattacagagacacttctagaagtgcttccagagtacctagacaaaaat
gacaagttcaacttccaaggttacagtcaggacaaactgaaccgggtatatgcagtaata
tatgacctcaggtatgttttagtcagcaagcctacattatggacagaccgtctgagggcg
cggtttttagaaggatttgtttctttcctaaggattctaacttgcatgcagggaatggag
gagataaaaagacagattggtcagcacattgaggtggaccctgactgggaagcagctatt
gctatacagatgcagctcaagaacattcttttgatgttccaggagtggtgtgcctgtgat
gaagagttgttactcagagcctacagtgaatgtcacaaagctgtgatgaggtgcagcaca
aatggccgctcacgggaaaagacagtgtttcacttgtgtggccatactctggagagcaga
ccttacagagtgtctgcagatcctgtcagcatacatttaccactgtctaggactcttgct
ggtcttcatgtacgattaagcaagactggaaccatctcaagactgcacgagtttgtttct
cctgaagaatttcaagtggagctgctagtggaatatcctttgcgatgccttgtcttggtt
gctcaggttgctgcagagatgtggagaaggaacgggctctccctgataagccaggtattc
tattatcaagatgttaaatgcagagaagagatgtatgataaagacattatcatgcttcag
ataggtgcatctcttatggatccaaaccagttcctcctgctgatactgcagagatacgag
cttgctgatactttcaaaaaactcaagcccaccaaagatcaggatttgatcaaacaatgt
aatgtgttaatagaagagatgctacagattctcatctacgttgtgggggaaagatatgtg
cctggagtgagtaatgtgacaaaagaagatgttaccatgagagaaatcatccatctgtta
tgtattgaaccaatggctcacagtgcaattaccaagtccttgcctgaaaatgagaacaat
gaaactggcttggagaatgtaattgatagagtggctacatttaagaaaccgggtgtgtct
ggccatggagtttatgaattgaaagatgaatgcttgaaggagttcaatatgttcttttat
cactatactaagacccagcacagcaaggctgaacatacacaaaagaaaagaaggaaacaa
gaaaacagagatgaagcattgccaccacctcctcctccagacttcagtcctgcattcagc
aacgtggtgaggattctgaactgtgacgttatgatgcacatactgcggactattctacag
agagcagtggaactggaaactcacttgtggactgaagctatgatccaaatggtgcttcat
ctcctttctttagggctactagaagagaagcagcagttacagaagtctccagaagaagaa
gtaacctttgatttttatcacaaagcaacacgaatgggaagctcggccttgaacgctgtg
aatgtgttaatgcttctggaaaaattaaagagagttcctcagttagaggcacagaaggac
acagtcaattggatactgcagatgtttgacacagtgaaaagattgagagaaaaatctagt
ttgacaacagtagcggctacatcaggctcagaagctacaaaaggtgatgagacacagagc
agtcaggataaagagaaagcggagcggaagagaaaggcagaagcagctaggttgcaccgt
cagaagataatggcccagatgtctgcactgcagaggaatttcattgaaacccataagctt
ctgtacgaaaacacactagaggcacaggggaaagaagattctattatggaggaggaaagc
atgtcttcagcaattgattactccagaattgctttgggtcccaaacgaggtccatctgtt
gctgagaaagaagttctgacctgtattctttgtcaggaggagcaggaagtaaagttggaa
agtgctgccatggtattatctgcctgtgtccagaaatcaactgctttaactcagaatagg
agcagaattcttgaactctcaggggagacgctagatcctctcttcatgcatcctgacttg
ccttgtgggacccacacgggaagctgtggtcatgtaatgcatgcagcctgctggcagaag
tactttgaagccatgcagctgaactttcgacaacgtctgcatgttgaacagatatttgac
ttggagaatggagagtatctttgtccactttgcaaatctctgtgcaatactgttattcct
atcgttccattgcaggctcaaaaaataaacagtgaggatgcggaggcagtagctcaaatt
ctctccctggccaggtggctggagattatcacagtcaggatatcaggctacagtgtgaaa
aatgctaaaggagagaaacaaagtcttccagctttcaccaacaagggcatggggaactct
gccttggaattccattccatccttagttttggagttcagtcctcagccaaatactcaagc
agcatcaaggagatgcttattctctttgccaccaccatttatagagttgggctaaaagtt
gctccaaatgaagctgattataggattcctatgatgacctggagcacatgtgcttttacc
atccagtgtatagaaaacctcttggaaacggagggcaagcctttatttggatctctacaa
aatagacagcacagtggccttaaagcattagtgcagtttgcagccgctcagagaacaaca
tcaccacaggtcctgattcagaaacatctgattcgtcttctaggagttcttctaccaaac
ttcaaagtggaagacactccatccctcttagaagtagatatgttccacattttggtggga
gttgtgttatcatttccatctttatactgggaggatgctgtagacttgcagccttcatca
attagttcagcctataaccacctctacctcttccatctgacaacactggcacacataaca
caaatcgtcgtctcttcagcaacagaatcccctactgctcgatcatctgacaacagtgag
gaggcgcagtctgcacagtctttctgtagagagatttgtcagtacaccagcggttgtttt
agtcaggatattccaggctggcttgtgtgggattgtgttaaaaaaggcatcatgcctttc
cttcgttgcgctgctttattttttcattatttgctgggagtttctccacctgaggagcta
ctacaagtttctgaagaagggcaattcaaggcactttgcagttacctctctctgcctacc
aatttgttcttgctcttccaagaatattgggacacagtaaatccactgcttcaaaggtgg
tgtgctgacccggtggtgttaagttgcttgaaggggaaaagcattgcagtaaggtatcct
aggaaaagaaatagtttaatagagcttcctgaagactatagctgccttctgaaccaagcc
tctcagtttagatgcccgcggtcttctgatgatgagcaaaaacatccagtattgtgttta
ttctgtggggctatgttgtgttcccagaatacttgttgtcaggaactggtgaatggggag
gagctgggagcctgtacttctcatgctcttcaatgtggagctggagtctgtatgtttctc
aaaatcagggaatgcaaagttgtcctcatcgaaggtaaaaccaggggctgcttgtatcct
gctccctacttggatgaatatggagaaacagacccaggtctgaaaagaggcaatcccctg
cacttatgtcgtgagcgttaccggaagctccatctgctatggcagcaacattgcatcata
gaggagattgccaggagccaagaaacaaatcagatcttctttggattcaactggcaactg
ctctga
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integrated database retrieval system
