Chroicocephalus ridibundus (black-headed gull): 134514292
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Entry
134514292 CDS
T10910
Symbol
PAN3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
crid03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
134514292 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
134514292 (PAN3)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134514292
NCBI-ProteinID:
XP_063187987
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Position
1:25656649..25742918
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AA seq
953 aa
AA seq
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MNSSGLPCSSPSPVVGPPPPPPVAGPAAGGAGAGGCGGGGAVKLKFCRYYAKDKTCFYGE
ECQFLHEEPGAAPAGPGPAAPLGGLPLGIPPAAAAGPGYPPHGASPGPAAAAVVGPKKAE
LGAGGGGGGGGGGGLDGPRLASITVGVGLQEGFECPENSDLGDQLRKSSMCKETPRSKFR
LLREKWTNVPGIDGGGLADASLTDSYFSTSFIGVNGFGNPAETKYPMMQRMTNSSSSPSL
LNDSAKQYAGHDPLTSPNSSLFNDFAALSVSQRRKLAKPAFPSFITDLEDRYNTVLPRKY
RLGMLDERIVPVGSKARKSKNPIGCLADRCKTGVPINMVWWNRVTENNLQTPNPSASEFI
PKGGSTSRLSNVSQSSMSAFSQALFSHPSMGSPATAGLAPGMSLSAGSSPLHSPKITPHT
SPAPRRRSHTPNPANYMVPTSASASVANAVSQPPSTGQVIQKETVGGTTYFYTDTTPAPL
TGMVFPNYHIYHPAAPHVAYMQPKANAPSFFMADELRQELINRHLITMAQIDQADIPAVP
AEVDSYHSLFPLEPLPPPNRIQKTSNFGYITSCYKAVNSKDDLPYCLRRIHGFRLVNTKC
MVLVDMWKKIQHSNIVTLREVFTTKAFGEHSLVFAYDFHAGGETMMSRHFNDPSADAYFT
KRKWGQHDGPLPRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACRVMDPTKILVTGKTR
LRVNCVGIFDVLTFDNSQNNPLALMAQFQQADLMSLGKVVLALACNSLSGIQRENLQKAM
ELVTINYSSDLKNLILYLLTDQNRLRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKE
VQNGRLFRLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGTPWIDLSH
IISCLNKLDAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAANGQL
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcagcggcctgccctgctcgtcgccgtcgccggtggtggggccgccgcccccc
ccaccggtggcggggccggcggccggcggggcaggggccggcggctgcggcggcggcggt
gccgtgaagctgaagttctgccgttactacgccaaggacaagacctgcttctacggcgaa
gagtgccagttcctgcatgaggagcccggcgccgcccccgccggcccggggcccgcggct
cccctcggcgggctccccctcggcatccccccggccgccgccgctgggcctggctacccg
ccgcacggggccagcccgggcccggcggcggcggcggtggtggggcctaagaaagccgag
ctgggggcgggaggcggcggcggaggcggcggcggcggggggctggatggcccgcggctg
gcgagtatcactgtaggagtgggccttcaggaaggatttgaatgcccagaaaatagtgac
cttggggaccagctcagaaaaagttccatgtgtaaggaaacacctagaagcaaatttaga
ctgctgcgggaaaagtggacaaatgttcccgggatagatggcggtgggttagctgatgct
agcctcacagattcctactttagcaccagcttcattggcgttaatggatttggaaatccc
gctgaaacaaagtatcccatgatgcagaggatgacaaatagcagcagctcccctagcctt
ctcaatgacagtgccaagcagtacgcaggccatgatccactaacttcaccaaattcatcc
ttgtttaatgactttgctgccctcagcgtgtctcaaaggaggaagctggcaaaaccagca
tttccttcgtttatcactgacttggaggacagatataatacagtcttgcccaggaagtat
cgactggggatgctggatgagaggatagttccggtgggatcaaaagcaagaaaatcaaag
aaccctattggctgtctggctgacaggtgtaaaacaggagtacccatcaatatggtttgg
tggaacagagtcacagaaaacaatttacagacaccaaatccttctgcaagtgagtttatt
cctaaaggaggatcaacctccaggctgagtaatgtatcccagtcaagtatgtctgccttc
tctcaagccttgttctctcacccctccatgggaagtcctgctactgctgggctagcacca
ggaatgtcactgtcagcaggatcttctcctcttcattcccccaaaataactcctcataca
tctcctgctcctcgaagaagaagtcatactcctaacccagcaaactatatggtgcctact
agtgcctctgcttctgtcgctaatgctgtctctcagcctccatctactggccaggtgatc
cagaaggaaacagtgggtggaaccacgtacttctacactgatacaactccagcacctctc
acgggaatggtatttccaaactaccacatttaccatccagctgcacctcatgttgcttac
atgcagccaaaagcaaatgcaccttccttcttcatggcagatgagctcagacaggaactg
atcaacagacacttaataactatggcccagattgatcaggctgatattcctgcggttcct
gcagaagtggacagctaccacagtctctttcctttggaaccactgccaccgcccaatcgg
atacagaaaacaagcaactttgggtacattacatcatgctataaagctgtaaatagtaaa
gatgacctgccatattgccttcggaggatacatggttttcgtcttgttaacacaaagtgc
atggtattggttgacatgtggaaaaaaattcagcactcaaatatagtaaccttgcgtgaa
gtgtttaccactaaagcatttggagaacattctcttgtgtttgcatatgattttcacgct
ggtggagagactatgatgagcagacacttcaatgaccctagtgctgatgcctatttcaca
aaacgaaaatggggtcagcatgatggacctctaccacggcagcatgctggattacttcca
gagtctttgatatgggcatatatcgtgcagctcagctctgcattacggaccattcataca
gcaggactggcatgtcgagttatggatccaacaaagattctagtaacaggcaaaacaagg
ttacgagttaattgcgttggaatctttgatgttttgacttttgacaacagtcaaaataat
ccactggcattaatggctcagtttcagcaagcagatctgatgtccctggggaaagttgtg
ttggctttggcttgcaattctttatcaggaattcagagagagaatttgcagaaagcaatg
gaactagtgacaatcaactattcctctgatctgaagaatctgattttgtatttgctgacc
gaccaaaacaggcttcgcagtgtaaatgatatcatgcctatgattggtgcgcgattctat
actcagttggatgctgctcaaatgcgaaatgatgttatagaggaagaccttgcaaaggag
gtgcaaaatggaaggttgtttaggcttctagcaaaattgggaacaatcaatgagaggcca
gagtttcagaaggacccaacgtggtcagaaactggagacagatatttactaaagctcttt
cgagatcaccttttccatcaggtgacagaagcgggtactccttggattgacctcagtcac
attatctcatgtcttaacaagttagatgctggtgtgccagaaaaaataagcctcatttcc
agagatgagaagagtgtacttgtggtaacttacagcgatttaaaacgctgctttgaaaat
acttttcaagaactgattgcagccgcaaatggtcagttgtag
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