Chroicocephalus ridibundus (black-headed gull): 134514309
Help
Entry
134514309 CDS
T10910
Symbol
DDB2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03420
Nucleotide excision repair
crid04115
p53 signaling pathway
crid04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134514309 (DDB2)
09124 Replication and repair
03420 Nucleotide excision repair
134514309 (DDB2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
134514309 (DDB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crid04121
]
134514309 (DDB2)
03400 DNA repair and recombination proteins [BR:
crid03400
]
134514309 (DDB2)
Ubiquitin system [BR:
crid04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
134514309 (DDB2)
DNA repair and recombination proteins [BR:
crid03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
134514309 (DDB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_WDR19_1st
EIF3I
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_TEP1_2nd
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
134514309
NCBI-ProteinID:
XP_063188032
LinkDB
All DBs
Position
4:47012441..47027874
Genome browser
AA seq
515 aa
AA seq
DB search
MAPVNQPKDKKHERAHEHGLEEAKSAGKRKLDYKELGNEPQAKRLFVRKASKPPEKIGWS
GGGSLVRNNRVLFHQLERHCSIVHYVYQNMLGGAIRAQLRRCLQLPFLRSLASYRLFRTA
SPFDRRVTCLEWHPTHPSTVAVGSKGGDIILWDHEVLTKTCFIKGKGPGDSLGDIKFSPY
EAVKLYVASGDGTLSLHDLEGRAVQVISRAPDCGHEYHNVCCWYCSVDVSASCRAVVTGD
NVGNVVLLSTSGEEIWKMKLHRKKVTHVEFNSRCEWLLATASVDQTVKIWDLRNIKNKMN
FLHVLPHDKPVNAAYFSPTDGAKLLSTDQRSEIRVYSSSDWTKPQHLIPHPHRQFQHLTP
IKATWHPRYDLIVAGRYPDPKFPGYTVNELRTVDVFDGNTGEMVCQLHDPNASGIISLNK
FNPMGDTLASGMGFNILIWSREEMVAKKQEHLLKAMTEQGIGSWSLSRRGGQRQANPGTS
KLKANLLSLELEEMRTKSNDSKSQGRKQKGKDLEK
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggctccagtgaaccagccaaaggacaagaaacatgagagggcacatgagcatgggctg
gaagaggcaaaatcagctgggaagaggaaactggactacaaggaactagggaatgagcca
caagcaaagaggttgtttgtgagaaaagcatccaaacccccagagaaaatcggttggagt
ggaggtggatctctggtgagaaataacagagtccttttccatcagctggagcggcactgc
agcattgtgcattacgtctaccagaacatgctaggaggcgccattcgggcacagctccgg
cggtgtctgcagctgccctttcttcgttctcttgcctcataccgcctctttcgaacagca
agtccctttgacaggagagtgacatgcctggaatggcatccaacacaccccagtactgta
gccgttggttctaaaggtggagacatcatcctttgggaccatgaagtacttactaaaacc
tgcttcataaaagggaaagggccaggagattctctcggagacatcaagttcagtccttat
gaggcagtgaagctttatgtggcatcaggggatggcaccctaagtctgcacgaccttgag
ggcagagcggtgcaggtgatctcccgtgccccggactgtggccatgaataccataatgtt
tgttgctggtactgcagcgttgatgtttctgcaagctgccgtgcagtagtgacaggtgat
aatgtgggcaacgtggtcctgctcagcacatctggtgaagagatttggaagatgaaattg
cacaggaagaaagtgactcatgtggaatttaactcccgatgtgagtggttgttggccaca
gcgtctgtggatcagacagtcaaaatctgggacctcagaaacatcaaaaacaaaatgaat
tttcttcatgtgcttcctcatgacaaacccgtcaatgcagcttacttcagcccaacagat
ggtgccaagctcctgagcacagatcagcgcagtgaaatcagggtttactcgtcttcagac
tggaccaagccacaacatctgatcccacatccacatcggcaatttcagcacctcacacct
attaaggcaacatggcatcctcgctatgacctcattgtagcaggtcgctacccagaccct
aagttcccagggtacacagtgaacgagctacgaactgttgatgtatttgatggcaacact
ggggagatggtttgccagctccatgatccaaatgcttctggtatcatctcgctcaataaa
tttaaccctatgggagacacactggcttctggcatgggctttaatattctgatctggagc
cgggaggagatggtggccaagaagcaagaacatcttttgaaagccatgacagaacagggg
attggaagctggagtttgtccagacgtggagggcagaggcaggcaaaccctgggacaagc
aaactcaaagctaacttactatctttggagctggaggagatgagaacaaaaagcaacgat
tctaaatcacagggaaggaagcaaaaagggaaggatctagagaaatga
DBGET
integrated database retrieval system
