Chroicocephalus ridibundus (black-headed gull): 134514541
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Entry
134514541 CDS
T10910
Symbol
PPFIBP2
Name
(RefSeq) liprin-beta-2 isoform X1
KO
K27096
liprin-beta
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crid04131
]
134514541 (PPFIBP2)
Membrane trafficking [BR:
crid04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
134514541 (PPFIBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF16
Motif
Other DBs
NCBI-GeneID:
134514541
NCBI-ProteinID:
XP_063188543
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All DBs
Position
4:10734900..10849583
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AA seq
981 aa
AA seq
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MMASDASHMLEAALEQMDDIIAGTKSATEYANGAYDIVSPAPSVYLGTFQILHLLEDLKM
ALEMLEDPQEKEALRNQIPGATAVCLREWFEENLSQVNHHSSNNETYQERLARLEGDKES
LILQVSVLTDQVEAQGEKIRDLEICLEGHQLKLNATEEMLQQELLSRTSLETQKLDLMAE
VSDLKIKLVGMEKEQSEYEEKQNKAEGLLQELRHLKIKVEELENERNQYEWKLKATKAEI
AQLQEQLALKDAEIERLQSQLARTSSHSEVAEREEVYRRRLKEKHQEVQRLKIGMESLLA
ANEEKDRRIEELTLLLSQYRRVKEIMIAAHGLVRQNGNLYLTHKNSEQESGSSISGGSEE
ELETTLRKWNLLSNPQGEIFKTEASSGELSPAVLSPVPHKAMEISGSIPASSSHLTSPQE
ESLDIVNRVPQKKKSSSLEDLQSESLEKHVEGKPVQPVVEQESKPLAKGSKYQTLPGKLP
RPLQNGEQGTYNSPNGCGMNENEDNGIAGLNRVRSVSAPVLGETENVDGTVVSDDLSPLS
SGTDSGPQSPLSPENRKSPKGIKKIWGKIRRTQSGNFPADDLGLAEFRRGGLRATAGPRL
ARTKETKGQKSDYNAPFAQWSTERVCNWLEDFGLGQYVIFARQWVTSGHTLLTATPQDME
KEMGIKHPLHRKKLVLAIKSINAKQEEKSAQLDHIWVTRWLDDIGLPQYKDQFHESRVDG
RMLQYLTVNDLLFLKVTSQLHHLSIKCAIHVLHVNSFNPHCLRRRPAEENNVSPSEVVQW
SNHRVMEWLRSVDLAEYAPNLRGSGVHGGLIILEPRFNGDTLAMLLNIPPQKTLLRRHLT
TNFNVLIGPEAQQEKREITESTAYTPLTTTAKVRPKKLGFSHFGNLRKKKFDESTDYICP
MDTNPAAANGTQKNYGGYKGLSPFTDRELDQMEHSEGTVMQIGALSQGISHLTVCTNFTL
VLKSQTYSARIWGKLVIAGGS
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgatggcttctgatgctagtcatatgctggaagcagctttggagcagatggatgacatc
attgcaggtacaaagtcagctacagagtatgctaatggtgcttatgatattgtgtcacct
gctccatcagtatacttgggcacatttcaaattttgcatctcctggaagatctaaagatg
gcattggaaatgctagaggatcctcaagagaaagaagcattgcgaaatcaaattccgggg
gccacagcagtgtgtctacgggagtggtttgaagagaatctgtcacaggtgaatcatcat
tcatctaataatgaaacttatcaagaaagattggcacgattagaaggtgataaagagtcg
ctcatactgcaggtgagtgttcttacagaccaggtggaagctcaaggagagaaaatccgg
gacttggaaatctgtctggaggggcatcagttgaaactgaatgctacagaagaaatgctt
caacaggagttgctaagtcgaacatcactagagactcagaaattagatctaatggctgaa
gtttcagacctgaagattaagctggtcggtatggaaaaggaacagagtgaatatgaagag
aaacagaacaaagctgagggtttgctacaggaacttagacacctcaaaattaaagtggaa
gaactggaaaatgaaagaaatcaatacgagtggaaattaaaagcaactaaagctgagata
gcccagcttcaagagcaattagctctcaaagatgcagaaatagaacgcttacaaagtcag
ctcgctaggacctcgtcacatagtgaagtggcagaaagagaggaagtttataggagaagg
ctaaaagaaaaacatcaagaagttcaacggttgaagataggaatggaatcattattggct
gcaaatgaagaaaaggaccgtcgaatagaggagttaacactattgctcagccagtacagg
agagtcaaagagataatgattgcagctcacggtcttgtacggcagaacggaaacttgtat
ttaacacacaagaatagcgaacaagagtcaggctcttccatctctggtggcagtgaagag
gaacttgagacgactttaaggaagtggaatcttctgagtaatcctcaaggagaaatattt
aaaacagaggcctcttcaggagaactgtcaccagctgtgctctctccagtgccacacaaa
gccatggaaatcagtggaagcattccagcatcttcgagtcatttaacctctccacaagaa
gaatctttggatatcgtaaatagggtaccacagaaaaaaaagtcaagtagtttagaagac
ttgcagagtgaatccctggaaaagcatgtagaaggaaaaccagtgcagcctgttgtagaa
caagagagtaagccacttgcgaaaggcagcaagtaccaaaccttgccaggaaagctgcct
cgacccttacagaacggagagcagggaacgtataattcgccaaatgggtgtggaatgaat
gagaatgaggacaacggcatcgcgggcctaaatcgcgtcaggagtgtcagtgcaccagtg
ctaggagaaacagagaatgtggatggtacggtagtctcggatgacctttcacctctttct
tcgggaacggattcaggtccacaatctccattgtctccagaaaacaggaagagtccaaaa
gggatcaagaaaatctggggaaaaataagaagaactcagtcaggtaacttccccgcagac
gatctgggtttggcagagtttcgaagaggtggtctccgtgcaacagctggccctcggtta
gccagaacaaaggaaactaaaggccagaaaagcgactacaatgctccgtttgctcagtgg
agcactgaaagagtttgtaactggcttgaggactttggtcttggtcagtatgtcattttt
gcgcggcagtgggtgacttcaggccatacactgttaactgcgacacctcaggacatggaa
aaggaaatgggaataaagcatccactgcacaggaagaaattagttttggccataaaatca
ataaatgcaaaacaagaggagaagtctgcacaactcgatcatatctgggtgacacgatgg
cttgatgatattggtttacctcagtacaaagaccagtttcatgaatccagagttgatggg
agaatgttgcagtatttaactgtgaatgaccttctctttctgaaagtcaccagtcagctg
catcatctgagtattaaatgtgccattcacgtgctgcacgtcaacagtttcaacccccac
tgcctacgcaggagaccagctgaggagaataatgtttcgccttctgaagtagttcagtgg
tccaatcacagggtgatggaatggctcagatcagtcgatctggcagaatatgcaccaaac
cttcgaggaagcggagtgcacggtggcctgattattctcgaacctcgcttcaatggtgac
acactagcaatgctgctgaatattccgcctcaaaagaccctgctgcgacgccacctaaca
accaattttaatgtattaattggaccagaggcacaacaagaaaaaagagaaataacagag
tcaacagcatacacacctctgaccaccactgccaaagttcggccaaagaaacttggattt
tcacattttggaaacttaagaaaaaagaagtttgatgaatcaacagactacatttgtcct
atggatacaaaccctgctgctgcgaatggtactcagaaaaactatggtggatacaaagga
cttagtccattcactgacagggaactggatcagatggaacattcagaaggaacagtaatg
caaataggggctctttcccaaggcataagccatcttacggtatgtactaatttcactctt
gttttaaagtcacaaacgtattctgctaggatttggggaaagttggtcattgctggtggt
agttaa
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