Chroicocephalus ridibundus (black-headed gull): 134514587
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Entry
134514587 CDS
T10910
Symbol
CTR9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crid03021
]
134514587 (CTR9)
Transcription machinery [BR:
crid03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
134514587 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
TPR_6
ARM_TT21_5th
TPR_Slam
TPR_9
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
134514587
NCBI-ProteinID:
XP_063188646
LinkDB
All DBs
Position
4:complement(12443200..12464691)
Genome browser
AA seq
1167 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYGKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVL
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVL
NAVKELELAHRYFSYLSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGEVEGSKE
KKRGGGGGRRSKKGAGEFDEFVNDDSDEDLPMSRKKKKRKGSGSEQDGEEEEGERKKKKR
RRPQKADEGSDDEEHENGPRPKKRRPPKAEKKKAPKPERLPPSMKGKIKSKAIISSSDDS
SDEDKLKIADDGHARNSNSDSDDGEQQHSKRIVSDSDSDNRNKSGSEAGSPRRSSVRPSE
EDSDSDRSARKRRRSDSEQSDNESVQSGRSRSGGSENESRPASRSADSDRDSERGSDNEG
SGRGSGNESEPEGSNDEGSEGGSDDSD
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgggggtctatcgagatccctctccgggacaccgatgaggtgatcgagcttgac
ttcgatcagctacctgagggtgatgaagttataagtatactgaaacaggaacacactcaa
ctgcacatatggattgccttagcgctggaatactacaaacaaggaaaaacagaagacttt
gtgaagctgttggaagctgcccgcatagatggtaacctggactatagagaccatgaaaaa
gatcagatgacgtgtctggatactctggcagcgtactatgtacagcaggctcgaaaggag
aagaacaaagataacaagaaggagctcattacacaagctaccttgttgtatactatggct
gacaaaattattatgtacgatcagaatcacttgctgggaagagcctgcttttgtctcctt
gaaggtgacaagatggaccaagctgatgcacaattccacttcgtgctcaaccagtctcca
aataatattcctgcccttcttggtaaagcatgcatttctttcaacaagaaagattataga
ggagcccttgcctactacaagaaagcattgcgtaccaatccaggttgcccagccgaggtt
cggttaggaatgggccactgcttcgtgaaactgaacaagttggaaaaagctcgcttagca
ttcagcagagctctggagctaaattcaaaatgtgtaggagccttggttggactggctgtt
ctggaactcaataataaagaggctgattccatcaagaatggtgttcagctcctctctagg
gcttacacaattgatcccagtaatccaatggtattgaatcacttggctaatcacttcttc
ttcaagaaggactatggtaaagtacaacacctggctcttcatgctttccataatacagaa
gttgaagcaatgcaggcagagagttgttatcagctggctaggtcttttcatgtacaggaa
gattatgatcaggctttccagtattattaccaggccactcagtttgcctcatcttctttt
gtacttccattttttggtttgggccaaatgtacatttatcgaggggacaaagagaatgca
tcacagtgctttgaaaaagttttgaaggcctatcctaacaattacgagactatgaaaatc
cttggatctctttatgctgcttcagaagatcaggagaaacgggatattgcgaagggacat
ctaaagaaagtcacagagcaatatcctgatgatgtagaggcatggattgaactagctcaa
attctcgaacagactgatatacagggtgcactgtcagcctatggtacagccacacgcatt
ctgcaagagaaagtacaggctgatgtcccaccagagattttgaataatgtgggtgctctg
cacttcaggctaggaaatctgggagaagcgaagaaatactttttggcatcactggatcgt
gcgaaagcagaagctgaacatgatgagcattattacaatgctatctctgtaacaacgtcc
tataaccttgccagactatatgaggcgatgtgtgaatttcatgaagcggaaaagctgtat
aaaaacattttaagagaacatcctaattacgttgattgctacttgcgcttgggagctatg
gctagggataaaggaaatttttatgaggcttctgattggtttaaagaagcacttcagata
aatcaggaccatccagatgcttggtctctgattggcaatcttcatttggctaaacaagag
tggggtccaggacaaaagaaatttgaaagaatattgaagcagccctccacacaaaatgat
acttattccatgctggctcttggcaacgtctggttgcagactctgcatcaacccacaaga
gacagagaaaaggagaagcgtcatcaagaccgtgcattagcgatctacaagcaagtactc
agaaatgatccaaagaatttatatgctgctaatggcataggagctgtcttggcgcataaa
ggatatttccgtgaagctcgtgatgtttttgcccaagtgagagaggcaacagcagatatc
agtgatgtgtggctgaatttggcacatatctacgtagaacagaaacagtacatcagtgct
gtgcagatgtatgaaaactgcctcagaaagttctataagcatcaaaatactgaagtattg
ttatatttggcccgggcgctcttcaaatgtggcaaattacaggaatgcaaacaaactttg
ttaaaggccaggcatgtagcgccaagtgacacagtccttatgtttaatgtggctttagtg
ctacaaagactagctacctctgtcctgaaagatgaaaaaagcaatctaaaggaggtgctt
aatgctgtgaaagaactggagctagcacacaggtacttcagttacttgagtaaagtaggt
gataagatgagatttgacttggcacttgctgctacggaagccaggcaatgctctgactta
ctgagtcaagcccagtatcatgtggctcgggcacgcaagcaggatgaagaagagagggag
ctgcgtgcaaaacaagagcaagaaaaggagctgcttcgccaaaagctacttaaagaacag
gaagagaagcgcctaagagaaaaagaagaacagaagaaacttctggaacaaagagctcaa
tatgtggagaaaaccaagaatattctgatgttcactggtgaagtagaaggatcaaaggag
aaaaaacgtggtggcggtggaggcaggcgttccaaaaaaggagcaggggaatttgatgag
ttcgtcaacgatgacagtgatgaagatctgcccatgtctagaaagaagaagaagaggaag
ggcagtggtagtgaacaagatggggaagaagaggagggtgagagaaagaagaagaagagg
aggagaccccagaaggcagatgaggggagtgatgatgaagaacatgaaaatggtccaaga
cctaaaaaacgacgtccacccaaagcagagaaaaagaaggctcccaaaccagaacgtctg
cctccttcaatgaaaggaaagatcaaatcaaaagccatcatttcatcaagtgatgattct
tctgatgaggataaactcaaaattgctgatgatggacatgctaggaatagcaacagtgat
tcagatgatggggaacagcaacacagtaaacgcattgtttctgatagcgattctgataac
agaaacaaatctggtagcgaggcaggtagtccaaggagatccagtgtccgcccatctgag
gaagattctgacagtgacaggtcagctaggaaaaggaggcggtcagattcggagcagtct
gacaatgagtctgtccagtcggggagaagtcgttccggtggttcagaaaatgaatctcgc
ccagcttctcgcagtgctgactcagacagagattctgagagaggatctgacaacgagggc
tctggcagaggatctggtaacgaatccgaaccagaaggatccaacgatgaggggtctgaa
ggtggttcagatgacagtgattag
DBGET
integrated database retrieval system
