KEGG   Chroicocephalus ridibundus (black-headed gull): 134514628
Entry
134514628         CDS       T10910                                 
Symbol
RFC3
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
crid  Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03030  DNA replication
crid03410  Base excision repair
crid03420  Nucleotide excision repair
crid03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:crid00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    134514628 (RFC3)
   03410 Base excision repair
    134514628 (RFC3)
   03420 Nucleotide excision repair
    134514628 (RFC3)
   03430 Mismatch repair
    134514628 (RFC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:crid03032]
    134514628 (RFC3)
   03036 Chromosome and associated proteins [BR:crid03036]
    134514628 (RFC3)
   03400 DNA repair and recombination proteins [BR:crid03400]
    134514628 (RFC3)
DNA replication proteins [BR:crid03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    134514628 (RFC3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    134514628 (RFC3)
Chromosome and associated proteins [BR:crid03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    134514628 (RFC3)
DNA repair and recombination proteins [BR:crid03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     134514628 (RFC3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    134514628 (RFC3)
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 AAA_lid_RFC1 Rad17 AAA AAA_22 AAA_16 ABC_tran nSTAND6 AAA_2 Sigma54_activ_2 AAA_11
Other DBs
NCBI-GeneID: 134514628
NCBI-ProteinID: XP_063188750
LinkDB
Position
1:28097009..28108396
AA seq 356 aa
MSLWVDKYRPGSLGRLDFHREQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQSITAPSKKKIEISTIASNYHLEVNPSDAGNNDRVVIQELLKTVAQSQQ
LETSTQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMATCRLILCCNSVSKIIGPIQSRCL
AVRVPAPSIEDICHVLSSVCKKEGLMLPPELAQRLAEKSGRNLRKALLMCESCRVQQYPF
TADQDIPEMDWEVYLRETANAIVGQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLLTELL
NNCDGQLKGEVAQMAAFYEHRLQLGSKAIYHLEAFVAKFMAIYKKFMEDGLDDMMF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagcctgtgggtggacaagtaccggcccggatccctcggcaggctggacttccaccgc
gagcaggcggcgcagctccgcaacttggttcagtgtggtgacttcccccacctgttggtg
tatggaccatcaggagctggaaaaaagacaagaatcatgtgtttgttaagggaattatac
ggtgcaggagtggaaaaactgaggattgagcatcagagtataacggcaccttctaaaaag
aaaattgaaattagcaccattgcaagtaattatcaccttgaagttaacccaagtgatgca
ggaaacaatgaccgtgtagtaattcaggaactcttgaagacagtagcacaatcccaacag
cttgagacaagtactcaacgagactttaaagtggtgctgttaacagaagttgacaaactc
actaaagacgctcagcatgctttgcgaagaacaatggagaaatacatggcgacctgcagg
ttgatcctgtgctgcaactccgtgtcaaaaatcatagggcctattcaaagcagatgcctg
gctgtacgagtgcctgctcccagcattgaagatatctgccatgtcttgtccagtgtgtgt
aagaaagaaggcctgatgcttccgccggaactggctcaaaggcttgcagagaaatctggc
aggaatcttcggaaagcactacttatgtgtgaatcctgcagagtacaacagtatcctttt
actgctgatcaagacattcctgagatggactgggaagtttatttgagagaaactgcaaat
gctattgttggtcaacagacaccacaaaggctcttagaggtccgtggacggctttatgaa
cttctgacacactgcattcctcctgagattataatgaagggcctcctgacagaacttcta
aataactgtgatggacaactgaaaggagaagtcgcacagatggcggccttctatgaacac
cgcctgcaactgggcagcaaagccatttatcatctggaagcgtttgtagcaaagtttatg
gcaatttacaagaagtttatggaggatggactagatgacatgatgttctaa

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