Chroicocephalus ridibundus (black-headed gull): 134514817
Help
Entry
134514817 CDS
T10910
Symbol
USH1C
Name
(RefSeq) harmonin isoform X1
KO
K21877
harmonin
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
crid03037
]
134514817 (USH1C)
Cilium and associated proteins [BR:
crid03037
]
Primary cilia and associated proteins
USH complex and associated proteins
134514817 (USH1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
USH1C_N
PDZ_6
PDZ_2
DUF3567
FapA
Baculo_LEF5_C
SHR3_chaperone
Motif
Other DBs
NCBI-GeneID:
134514817
NCBI-ProteinID:
XP_063189191
LinkDB
All DBs
Position
4:complement(16140898..16194343)
Genome browser
AA seq
556 aa
AA seq
DB search
MERRVAREFRHKVNLLIDNEAEKDYLYDVLRMYHQSMNLPVLVGDLKLVINEPSRLPLFD
AIRPLIPLKHQVEYDQLTPKRSRKLKEVRLDRLHPEGLGISVRGGVEFSCGLFISQLVKG
GQADNVGLQVGDEIVRINGYSISSCTHEEVINLIRTKKIVSIKVRHVGMIPVKSSADEPL
KWQYVDQFVSESEEGKGSVAGLASSGGRDNKEKKVFISLIGTKGMGCSISSGPTQKPGIF
ISNVKPGSLSAEVGLEVGDQIVEVNGVDFSNVDHKEAVRVLKSSRTLTISVVAGAGKELF
MTEDERQREARLREQERQELMHQKRLALETNKIIKEQQEKERLRKLEISQKAAEEEERYR
REIEQITAEEEKFKKEWEEDWGPKEPPKSLKTVTAEVHSAPRSKQKIDLEGVAHDQLETD
DMDEVITKQDKQGFQKYLEDFDPYSMFTPEQIVGKDVRLLRIKKEGSLDLAVEGGIDSPI
GKIVVSAIYEGGAADKHGGIVKGDEILAVNGKILIDSKLAEAQATLAKAWNMGGDWIDLV
IAASPPKEYDDEVTFF
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcagggtggcccgtgagttccggcacaaggttaatctactaattgacaatgaa
gcggagaaagattacctttatgatgtgctgcggatgtatcaccaatctatgaatctccca
gtgctcgtgggggacttaaaacttgtgattaacgaaccaagcagattgcctctatttgat
gctatccgcccacttatcccattaaaacaccaggtggaatacgatcagcttacgccaaaa
agatcacgaaagctgaaagaggtgagattggatcgtttgcatcctgaaggacttggaata
agtgtgagaggtggagtggaatttagctgcggcctcttcatctcccagttagttaaagga
ggacaggcagacaatgttggacttcaggttggagatgagatagttcgtataaacggatat
tctatttcctcgtgcacacatgaagaagtcataaacctcattcgtacaaagaaaatagtg
tccataaaagtaagacatgttggcatgatacctgtcaaaagttcagcagacgaacccctt
aaatggcaatatgtggaccaatttgtgtcagagtctgaggaagggaagggcagtgttgct
ggtcttgcttcttctggagggagagacaataaagagaagaaagttttcattagcttgatt
ggtacaaaaggcatgggatgcagtatttccagtggtccaacacaaaaaccaggcattttc
atcagtaatgttaagccgggttctctttcagcagaggtgggcttagaggtcggtgatcag
atcgttgaggtaaatggagtggacttttctaatgtggatcataaagaggctgtcagagtg
ctcaaaagtagtcgtactttgactatctcggtggtagcaggcgctggaaaggagctgttt
atgactgaagatgaaaggcagagagaagcacgtcttcgtgagcaggaacgccaggagtta
atgcatcagaagcgacttgcactggagactaacaagatcatcaaagagcagcaagagaaa
gagagattaagaaaactggagatttcccagaaggctgcagaggaagaagagagatatcgc
agagaaatagagcagataacagcagaggaggagaaatttaaaaaggagtgggaagaagac
tggggtcctaaagaacctcccaaatctctaaaaactgtaactgcagaagtgcactctgcc
cctcgttccaaacagaagatagatttagagggagttgcacatgaccaacttgaaacagat
gacatggatgaagtgatcacgaagcaggacaaacagggcttccagaagtatttggaagat
tttgatccgtattcaatgtttacaccagagcagattgtgggaaaagatgtacggctgtta
cgaattaaaaaggaaggatcattagaccttgcagtcgagggaggaattgattctccaatt
ggaaagatagtcgtgtctgccatctatgagggtggtgctgcagacaaacatggaggcata
gtgaaaggggatgaaatcctagctgtaaatggcaagatactaattgacagcaagctggca
gaagcacaggcaactctagcaaaagcttggaatatgggtggggattggattgacttagtc
attgcggcatcacctccaaaggaatatgatgatgaagtgacattcttttaa
DBGET
integrated database retrieval system
